| Literature DB >> 27609193 |
Koujiro Ikushima1, Hidetaka Arimura2, Ze Jin1,3, Hidetake Yabu-Uchi4, Jumpei Kuwazuru5, Yoshiyuki Shioyama6, Tomonari Sasaki4, Hiroshi Honda4, Masayuki Sasaki4.
Abstract
We have proposed a computer-assisted framework for machine-learning-based delineation of gross tumor volumes (GTVs) following an optimum contour selection (OCS) method. The key idea of the proposed framework was to feed image features around GTV contours (determined based on the knowledge of radiation oncologists) into a machine-learning classifier during the training step, after which the classifier produces the 'degree of GTV' for each voxel in the testing step. Initial GTV regions were extracted using a support vector machine (SVM) that learned the image features inside and outside each tumor region (determined by radiation oncologists). The leave-one-out-by-patient test was employed for training and testing the steps of the proposed framework. The final GTV regions were determined using the OCS method that can be used to select a global optimum object contour based on multiple active delineations with a LSM around the GTV. The efficacy of the proposed framework was evaluated in 14 lung cancer cases [solid: 6, ground-glass opacity (GGO): 4, mixed GGO: 4] using the 3D Dice similarity coefficient (DSC), which denotes the degree of region similarity between the GTVs contoured by radiation oncologists and those determined using the proposed framework. The proposed framework achieved an average DSC of 0.777 for 14 cases, whereas the OCS-based framework produced an average DSC of 0.507. The average DSCs for GGO and mixed GGO were 0.763 and 0.701, respectively, obtained by the proposed framework. The proposed framework can be employed as a tool to assist radiation oncologists in delineating various GTV regions.Entities:
Keywords: zzm32199018F-fluorodeoxyglucose (FDG)-positron emission tomography (PET); gross tumor volume (GTV); image segmentation; machine learning; planning computed tomography
Mesh:
Year: 2016 PMID: 27609193 PMCID: PMC5321188 DOI: 10.1093/jrr/rrw082
Source DB: PubMed Journal: J Radiat Res ISSN: 0449-3060 Impact factor: 2.724
Fig. 1.An overall scheme of the proposed framework.
Summary of patient characteristics
| Case no. | Gender | Age (years) | GTV size[ | Tumor location | SUVmax
[ | Tumor type | Tumor CT imaging characteristics |
|---|---|---|---|---|---|---|---|
| 1 | F[ | 71 | 17.7 | RUL[ | 8.43 | Solid | Homogeneous Irregular |
| 2 | F | 67 | 24.2 | RUL | 12.2 | Solid | Homogeneous Irregular Vascular |
| 3 | M[ | 65 | 25.3 | RUL | 6.79 | Solid | InhomogeneousIrregular |
| 4 | M | 75 | 20.2 | LUL[ | 8.74 | Solid | Inhomogeneous Irregular Adjacent Pleural |
| 5 | M | 86 | 29.4 | LUL | 9.68 | Solid | Cavity Irregular |
| 6 | F | 81 | 25.8 | RUL | 4.43 | Solid | Homogeneous Irregular Pleural Indentation |
| 7 | M | 76 | 17.8 | LUL | 1.73 | GGO | Irregular Pleural Indentation Vascular |
| 8 | F | 74 | 16.4 | RLL[ | 1.29 | GGO | Regular |
| 9 | M | 81 | 18.5 | LUL | 2.56 | GGO | Regular |
| 10 | F | 79 | 21.2 | RUL | 1.45 | GGO | Irregular |
| 11 | M | 77 | 20.5 | LLL[ | 6.5 | Mixed GGO | Inhomogeneous Irregular Cavity |
| 12 | F | 85 | 13.8 | RUL | 1.72 | Mixed GGO | Irregular |
| 13 | M | 65 | 18.3 | RUL | 1.29 | Mixed GGO | Regular Inhomogeneous |
| 14 | F | 84 | 16.3 | LLL | 1.39 | Mixed GGO | Irregular Pleural Indentation Vascular |
aEffective diameter.
bMaximum standardized uptake value.
cFemale.
dMale.
eRight upper lobe.
fLeft upper lobe.
gRight lower lobe.
hLeft lower lobe.
Fig. 2.An illustration of the structure of a support vector machine constructed using six image features. In this figure, indicates the support vector, and refers to the weight that determines the discriminant function .
Comparisons of DSCs for three types obtained by the proposed framework using four and six features with and without the OCS method
| Tumor type | Four features[ | Six features[ | ||
|---|---|---|---|---|
| Without OCS[ | With OCS method | Without OCS method | With OCS method | |
| Solid | 0.834 ± 0.034 | 0.822 ± 0.049 | 0.829 ± 0.024 | 0.836 ± 0.044 |
| GGO | 0.763 ± 0.043 | 0.674 ± 0.051 | 0.758 ± 0.043 | 0.636 ± 0.169 |
| Mixed GGO | 0.701 ± 0.145 | 0.553 ± 0.092 | 0.699 ± 0.145 | 0.591 ± 0.058 |
aThe voxel values and the magnitudes of the image gradient vector on the planning CT and the diagnostic CT images.
bThe voxel values and the magnitudes of the image gradient vector on the planning CT, PET and diagnostic CT images.
cOptimum contour selection.
Fig. 3.A post-processing algorithm to apply for an original SVM-output image.
Fig. 4.Illustrations of the relationship on the LSM between the evolution time and the average speed function on a moving contour. The inserted images in this figure show the resulting contours on a lung tumor image at evolution times of 0, 1500, 3000 and 4500.
Fig. 5.Original images and gradient vector magnitude images obtained from the planning CT and PET/CT image datasets that were fed as image features to the SVM.
Fig. 6.Illustrations of the original planning CT, the PET and SVM-output images for solid, GGO and mixed GGO types of lung tumors.
Fig. 7.Relationship between the six image features and SVM-output value. The gradient refers to the magnitude of a gradient vector.
Three-dimensional Dice similarity coefficients (DSCs) of the proposed framework (SVM-based framework) and conventional framework (OCS[a]-based framework) for 14 cases
| Case no. | Tumor type | OCS[ | SVM-based framework[ |
|---|---|---|---|
| 1 | Solid | 0.788 | 0.841 |
| 2 | Solid | 0.758 | 0.835 |
| 3 | Solid | 0.801 | 0.799 |
| 4 | Solid | 0.832 | 0.897 |
| 5 | Solid | 0.778 | 0.870 |
| 6 | Solid | 0.791 | 0.778 |
| 7 | GGO | 0.000 | 0.793 |
| 8 | GGO | 0.000 | 0.751 |
| 9 | GGO | 0.000 | 0.706 |
| 10 | GGO | 0.438 | 0.800 |
| 11 | Mixed GGO | 0.419 | 0.487 |
| 12 | Mixed GGO | 0.444 | 0.729 |
| 13 | Mixed GGO | 0.516 | 0.795 |
| 14 | Mixed GGO | 0.620 | 0.791 |
| Mean 1[ | 0.645 | 0.784 | |
| Mean 2[ | 0.507 | 0.777 |
aOptimum contour selection.
bSolid: SVM with six features using OCS method, and GGO and mixed GGO: SVM with four features.
cMean for 11 cases excluding 3 cases of Cases 7, 8 and 9, whose GTV regions were not segmented
dMean for 14 cases.
Fig. 8.A comparison between results of the proposed framework and the conventional framework in terms of tumor CT imaging characteristics.