Literature DB >> 27607468

A Bayesian framework for joint morphometry of surface and curve meshes in multi-object complexes.

Pietro Gori1, Olivier Colliot2, Linda Marrakchi-Kacem3, Yulia Worbe2, Cyril Poupon4, Andreas Hartmann2, Nicholas Ayache5, Stanley Durrleman3.   

Abstract

We present a Bayesian framework for atlas construction of multi-object shape complexes comprised of both surface and curve meshes. It is general and can be applied to any parametric deformation framework and to all shape models with which it is possible to define probability density functions (PDF). Here, both curve and surface meshes are modelled as Gaussian random varifolds, using a finite-dimensional approximation space on which PDFs can be defined. Using this framework, we can automatically estimate the parameters balancing data-terms and deformation regularity, which previously required user tuning. Moreover, it is also possible to estimate a well-conditioned covariance matrix of the deformation parameters. We also extend the proposed framework to data-sets with multiple group labels. Groups share the same template and their deformation parameters are modelled with different distributions. We can statistically compare the groups'distributions since they are defined on the same space. We test our algorithm on 20 Gilles de la Tourette patients and 20 control subjects, using three sub-cortical regions and their incident white matter fiber bundles. We compare their morphological characteristics and variations using a single diffeomorphism in the ambient space. The proposed method will be integrated with the Deformetrica software package, publicly available at www.deformetrica.org.
Copyright © 2016 Elsevier B.V. All rights reserved.

Entities:  

Keywords:  Atlas; Bayesian; Complex; Fiber bundle; Morphometry; Multi-object; Shape; Varifolds

Mesh:

Year:  2016        PMID: 27607468     DOI: 10.1016/j.media.2016.08.011

Source DB:  PubMed          Journal:  Med Image Anal        ISSN: 1361-8415            Impact factor:   8.545


  4 in total

Review 1.  Revolution of Alzheimer Precision Neurology. Passageway of Systems Biology and Neurophysiology.

Authors:  Harald Hampel; Nicola Toschi; Claudio Babiloni; Filippo Baldacci; Keith L Black; Arun L W Bokde; René S Bun; Francesco Cacciola; Enrica Cavedo; Patrizia A Chiesa; Olivier Colliot; Cristina-Maria Coman; Bruno Dubois; Andrea Duggento; Stanley Durrleman; Maria-Teresa Ferretti; Nathalie George; Remy Genthon; Marie-Odile Habert; Karl Herholz; Yosef Koronyo; Maya Koronyo-Hamaoui; Foudil Lamari; Todd Langevin; Stéphane Lehéricy; Jean Lorenceau; Christian Neri; Robert Nisticò; Francis Nyasse-Messene; Craig Ritchie; Simone Rossi; Emiliano Santarnecchi; Olaf Sporns; Steven R Verdooner; Andrea Vergallo; Nicolas Villain; Erfan Younesi; Francesco Garaci; Simone Lista
Journal:  J Alzheimers Dis       Date:  2018       Impact factor: 4.472

2.  Benchmarking off-the-shelf statistical shape modeling tools in clinical applications.

Authors:  Anupama Goparaju; Krithika Iyer; Alexandre Bône; Nan Hu; Heath B Henninger; Andrew E Anderson; Stanley Durrleman; Matthijs Jacxsens; Alan Morris; Ibolya Csecs; Nassir Marrouche; Shireen Y Elhabian
Journal:  Med Image Anal       Date:  2021-10-26       Impact factor: 8.545

3.  A landmark-free morphometrics pipeline for high-resolution phenotyping: application to a mouse model of Down syndrome.

Authors:  Nicolas Toussaint; Yushi Redhead; Marta Vidal-García; Lucas Lo Vercio; Wei Liu; Elizabeth M C Fisher; Benedikt Hallgrímsson; Victor L J Tybulewicz; Julia A Schnabel; Jeremy B A Green
Journal:  Development       Date:  2021-03-12       Impact factor: 6.862

4.  Nonlinear interaction between APOE ε4 allele load and age in the hippocampal surface of cognitively intact individuals.

Authors:  Gerard Martí-Juan; Gerard Sanroma-Guell; Raffaele Cacciaglia; Carles Falcon; Grégory Operto; José Luis Molinuevo; Miguel Ángel González Ballester; Juan Domingo Gispert; Gemma Piella
Journal:  Hum Brain Mapp       Date:  2020-10-05       Impact factor: 5.038

  4 in total

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