Literature DB >> 27602726

The Charge Properties of Phospholipid Nanodiscs.

Cheng Her1, Dana I Filoti2, Mark A McLean3, Stephen G Sligar3, J B Alexander Ross4, Harmen Steele3, Thomas M Laue2.   

Abstract

Phospholipids (PLs) are a major, diverse constituent of cell membranes. PL diversity arises from the nature of the fatty acid chains, as well as the headgroup structure. The headgroup charge is thought to contribute to both the strength and specificity of protein-membrane interactions. Because it has been difficult to measure membrane charge, ascertaining the role charge plays in these interactions has been challenging. Presented here are charge measurements on lipid Nanodiscs at 20°C in 100 mM NaCl, 50 mM Tris, at pH 7.4. Values are also reported for measurements made in the presence of Ca(2+) and Mg(2+) as a function of NaCl concentration, pH, and temperature, and in solvents containing other types of cations and anions. Measurements were made for neutral (phosphatidylcholine and phosphatidylethanolamine) and anionic (phosphatidylserine, phosphatidic acid, cardiolipin, and phosphatidylinositol 4,5-bisphosphate (PIP2)) PLs containing palmitoyl-oleoyl and dimyristoyl fatty acid chains. In addition, charge measurements were made on Nanodiscs containing an Escherichia coli lipid extract. The data collected reveal that 1) POPE is anionic and not neutral at pH 7.4; 2) high-anionic-content Nanodiscs exhibit polyelectrolyte behavior; 3) 3 mM Ca(2+) neutralizes a constant fraction of the charge, but not a constant amount of charge, for POPS and POPC Nanodiscs; 4) in contrast to some previous work, POPC only interacts weakly with Ca(2+); 5) divalent cations interact with lipids in a lipid- and ion-specific manner for POPA and PIP2 lipids; and 6) the monovalent anion type has little influence on the lipid charge. These results should help eliminate inconsistencies among data obtained using different techniques, membrane systems, and experimental conditions, and they provide foundational data for developing an accurate view of membranes and membrane-protein interactions.
Copyright © 2016 Biophysical Society. Published by Elsevier Inc. All rights reserved.

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Year:  2016        PMID: 27602726      PMCID: PMC5018125          DOI: 10.1016/j.bpj.2016.06.041

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  47 in total

1.  A method for directly fitting the time derivative of sedimentation velocity data and an alternative algorithm for calculating sedimentation coefficient distribution functions.

Authors:  J S Philo
Journal:  Anal Biochem       Date:  2000-03-15       Impact factor: 3.365

2.  Analytical ultracentrifugation as a contemporary biomolecular research tool.

Authors:  J L Cole; J C Hansen
Journal:  J Biomol Tech       Date:  1999-12

3.  Analytical ultracentrifugation: sedimentation velocity analysis.

Authors:  Walter Stafford
Journal:  Curr Protoc Protein Sci       Date:  2003-05

4.  An apparatus for membrane-confined analytical electrophoresis.

Authors:  T M Ridgeway; D B Hayes; T P Moody; T J Wilson; A L Anderson; J H Levasseur; P D Demaine; B E Kenty; T M Laue
Journal:  Electrophoresis       Date:  1998-07       Impact factor: 3.535

5.  Ca2+, Mg2+, Li+, Na+, and K+ distributions in the headgroup region of binary membranes of phosphatidylcholine and phosphatidylserine as seen by deuterium NMR.

Authors:  M Roux; M Bloom
Journal:  Biochemistry       Date:  1990-07-31       Impact factor: 3.162

6.  The effect of metal cations on the phase behavior and hydration characteristics of phospholipid membranes.

Authors:  Hans Binder; Olaf Zschörnig
Journal:  Chem Phys Lipids       Date:  2002-05       Impact factor: 3.329

Review 7.  Membrane protein assembly into Nanodiscs.

Authors:  Timothy H Bayburt; Stephen G Sligar
Journal:  FEBS Lett       Date:  2009-10-16       Impact factor: 4.124

8.  Specific binding of chloride ions to lipid vesicles and implications at molecular scale.

Authors:  Volker Knecht; Benjamin Klasczyk
Journal:  Biophys J       Date:  2013-02-19       Impact factor: 4.033

Review 9.  Biophysical characterization of membrane proteins in nanodiscs.

Authors:  Sayaka Inagaki; Rodolfo Ghirlando; Reinhard Grisshammer
Journal:  Methods       Date:  2012-12-03       Impact factor: 3.608

10.  Influence of Size on Electrokinetic Behavior of Phosphatidylserine and Phosphatidylethanolamine Lipid Vesicles.

Authors: 
Journal:  J Colloid Interface Sci       Date:  1998-10-15       Impact factor: 8.128

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  14 in total

Review 1.  Charge matters.

Authors:  Thomas Laue
Journal:  Biophys Rev       Date:  2016-10-20

Review 2.  Nanodiscs in Membrane Biochemistry and Biophysics.

Authors:  Ilia G Denisov; Stephen G Sligar
Journal:  Chem Rev       Date:  2017-02-08       Impact factor: 60.622

3.  The Human Cytochrome c Domain-Swapped Dimer Facilitates Tight Regulation of Intrinsic Apoptosis.

Authors:  Harmen B B Steele; Margaret M Elmer-Dixon; James T Rogan; J B Alexander Ross; Bruce E Bowler
Journal:  Biochemistry       Date:  2020-06-01       Impact factor: 3.162

4.  Nanodiscs: A Controlled Bilayer Surface for the Study of Membrane Proteins.

Authors:  Mark A McLean; Michael C Gregory; Stephen G Sligar
Journal:  Annu Rev Biophys       Date:  2018-03-01       Impact factor: 12.981

5.  Preparation of Lipid Nanodiscs with Lipid Mixtures.

Authors:  Mavis Jiarong Li; William M Atkins; Wynton D McClary
Journal:  Curr Protoc Protein Sci       Date:  2019-12

6.  Nanodisc-based kinetic assays reveal distinct effects of phospholipid headgroups on the phosphoenzyme transition of sarcoplasmic reticulum Ca2+-ATPase.

Authors:  Kazuo Yamasaki; Takashi Daiho; Stefania Danko; Satoshi Yasuda; Hiroshi Suzuki
Journal:  J Biol Chem       Date:  2017-10-15       Impact factor: 5.157

7.  Serum amyloid A sequesters diverse phospholipids and their hydrolytic products, hampering fibril formation and proteolysis in a lipid-dependent manner.

Authors:  Shobini Jayaraman; Donald L Gantz; Christian Haupt; Marcus Fändrich; Olga Gursky
Journal:  Chem Commun (Camb)       Date:  2018-04-03       Impact factor: 6.222

8.  Spectroscopic Characterization of Halorhodopsin Reconstituted into Nanodisks Using Native Lipids.

Authors:  Ayumi Yamamoto; Takashi Tsukamoto; Kenshiro Suzuki; Eri Hashimoto; Yoshihiro Kobashigawa; Kousuke Shibasaki; Takeshi Uchida; Fuyuhiko Inagaki; Makoto Demura; Koichiro Ishimori
Journal:  Biophys J       Date:  2020-04-29       Impact factor: 4.033

Review 9.  A narrative review of urinary phospholipids: from biochemical aspect towards clinical application.

Authors:  Xin Li; Kenji Nakayama; Takayuki Goto; Shusuke Akamatsu; Takashi Kobayashi; Koji Shimizu; Osamu Ogawa; Takahiro Inoue
Journal:  Transl Androl Urol       Date:  2021-04

Review 10.  Nanodiscs: A toolkit for membrane protein science.

Authors:  Stephen G Sligar; Ilia G Denisov
Journal:  Protein Sci       Date:  2020-11-16       Impact factor: 6.993

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