| Literature DB >> 27598332 |
Jung Soo Kim1, Jinyoung Choi1, Hyung-Jin Hahn1, Young-Bok Lee1, Dong-Soo Yu1, Jin-Wou Kim1.
Abstract
The macrophage migration inhibitory factor (MIF) gene is located on human chromosome 22q11.2 and is linked to atopic phenotypes. Plasma MIF and log [total IgE] levels are significantly elevated in atopic dermatitis (AD) patients. The aim of this study was to evaluate the relationship between two MIF polymorphisms, -173 G to C and -794 CATT5-8, and total plasma IgE levels in AD patients in Korea. We performed PCR-RFLP analysis in 178 AD patients and 80 control subjects to determine whether MIF SNPs are associated with susceptibility to AD. Plasma total IgE and MIF levels were determined, and then logistic regression analyses were performed to determine the associations between a SNP or haplotype and plasma total IgE or MIF levels. The -173 G/C polymorphism, located in the MIF promoter, was significantly associated with AD; the odds ratios (ORs) for the CC homozygotes and GC heterozygotes were 9.3 and 2.5, respectively. The MIF C/5-CATT and the MIF C/7-CATT haplotypes were significantly associated with AD; the ORs for the MIF C/5-CATT and MIF C/7-CATT haplotypes were 9.7 and 4.5, respectively. Log [total IgE] levels were highly associated with the MIF -794 7-CATT polymorphism. Notably, the MIF C/7-CATT haplotype was associated with a decrease in plasma log [total IgE] levels in a gene dose-dependent manner. Although log [MIF] levels were not associated with the MIF polymorphisms, the frequencies of the MIF C/5-CATT haplotype-containing genotypes decreased in order of MIF levels. Our results demonstrate that MIF promoter polymorphisms in the -173 C allele and the MIF C/5-CATT and C/7-CATT haplotypes were significantly associated with an increased risk for AD. In particular, the -794 7-CATT locus and the MIF C/7-CATT haplotype were significantly associated with decreased total IgE levels in the plasma, suggesting that these polymorphisms might be a marker for intrinsic AD rather than extrinsic AD that shows high total IgE levels and presence of allergen-specific IgE.Entities:
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Year: 2016 PMID: 27598332 PMCID: PMC5012693 DOI: 10.1371/journal.pone.0162477
Source DB: PubMed Journal: PLoS One ISSN: 1932-6203 Impact factor: 3.240
Genotypic frequencies of MIF promoter polymorphisms in 258 Korean subjects.
| Atopic dermatitis (N = 178) | Controls (N = 80) | P | ||
|---|---|---|---|---|
| Age in years: | Median (range) | 22 (5–71) | 45 (24–80) | <0.0001 |
| Sex: | Female/Male | 83/ 95 | 23/ 57 | 0.007 |
| Positive rate of | 60 | UD | UD | |
| Positive rate of | 61 | UD | UD | |
| Log [IgE] ± SD | 5.51 ± 1.64 | 4.16 ± 1.20 | <0.0001 | |
| Log [MIF] ± SD | 5.87 ± 1.58 | 5.20 ± 2.03 | 0.0096 | |
| Genotype (%) | ||||
| -173 G/C | GG | 117 (65.7) | 61 (76.6) | 0.126 |
| GC | 51 (28.7) | 18 (22.5) | ||
| CC | 10 (5.6) | 1 (1.3) | ||
| -794 CATT repeat | 5,5 | 32 (18.0) | 15 (18.8) | 0.845 |
| 5,6 | 72 (40.5) | 35 (43.8) | ||
| 5,7 | 15 (8.4) | 6 (7.5) | ||
| 5,8 | 1 (0.6) | 0 (0) | ||
| 6,6 | 27 (15.2) | 11 (13.8) | ||
| 6,7 | 27 (15.2) | 9 (11.3) | ||
| 7,7 | 4 (2.3) | 4 (5.0) | ||
* Student’s t-test was used where appropriate.
MIF: macrophage migration inhibitory factor, Dp: Dermatophagoides pteronyssinus, Df: Dermatophagoides farina, UD: undetectable.
Impact of the MIF –173G/C and –794 [CATT]5–8 polymorphisms [OR (95% CI)] on atopic dermatitis.
| AD | -173 G/C | ORs (95% CI) | -794 [CATT]5–8 repeat | ORs (95% CI) | |
|---|---|---|---|---|---|
| Adjustments | -173 G | 5-CATT | |||
| None | +/+ | 1.0 (reference) | +/+ | 1.0 (reference) | |
| +/- | 1.5 (0.80–2.75) | +/- | 1.0 (0.49–2.06) | ||
| -/- | 5.2 (0.65–41.68) | -/- | 1.1 (0.52–2.46) | ||
| Age, sex, | +/+ | 1.0 (reference) | +/+ | 1.0 (reference) | |
| Log [total IgE] levels | +/- | 2.5 (1.09–5.55) | +/- | 0.9 (0.34–2.19) | |
| -/- | 9.3 (1.02–84.37) | -/- | 1.3 (0.48–3.46) |
Matching factors and potential confounding factors were adjusted for the unconditional logistic-regression analysis.
The analysis for atopic dermatitis was adjusted for age, sex, and log-transformed total plasma IgE levels.
OR: odds ratio; CI: confidence interval.
* P = 0.031.
**P = 0.048.
Impact of estimated haplotype frequencies of the MIF –173 G/C and –794 CATT repeat polymorphisms.
| Haplotype | Atopic dermatitis (%) | Controls (%) | OR (95%CI) | |
|---|---|---|---|---|
| G/5-CATT | 139 (39.0) | 68 (42.5) | 1.0 (reference) | |
| G/6-CATT | 130 (36.5) | 57 (35.6) | 0.330 | 1.3 (0.47–3.44) |
| G/7-CATT | 16 (4.5) | 15 (9.4) | 0.203 | 0.5 (0.20–1.40) |
| C/6-CATT | 23 (6.5) | 9 (5.6) | 0.643 | 1.3 (0.47–3.44) |
| C/8-CATT | 1 (0.3) | 0 (0) | 0.988 | >999 (<0.001 - >999) |
| Total | 356 (100) | 160 (100) |
No deviation from Hardy–Weinberg equilibrium was detected in patients with atopic dermatitis or in the control subjects for either the MIF –173 single nucleotide polymorphism (p = 0.16; 1.0) or the CATT repeat element (p = 1.0; 0.17).
a P-values for logistic regression analyses of the co-dominant models after controlling for sex and age, with log [total IgE] levels as a covariate. Significant associations are shown in bold.
Regression analysis for age- and sex-adjusted log [total IgE] with MIF polymorphisms among patients with atopic dermatitis.
| Locus | Genotype | |||
|---|---|---|---|---|
| -173 G>C | GG | GC | CC | 0.464 |
| 117 (5.62 ± 1.48) | 51 (5.42 ± 1.96) | 10 (4.91 ± 1.68) | ||
| -794 5-CATT | -/- | -/+ | +/+ | 0.300 |
| 58 (5.71 ± 1.709) | 88 (5.45 ± 1.58) | 32 (5.35 ± 1.71) | ||
| G/5-CATT | -/- | -/+ | +/+ | 0.389 |
| 63 (5.63 ± 1.69) | 91 (5.41 ± 1.65) | 24 (5.66 ± 1.48) | ||
| G/6-CATT | -/- | -/+ | +/+ | 0.518 |
| 66 (5.33 ± 1.71) | 94 (5.63 ± 1.63) | 18 (5.65 ± 1.41) | ||
| G/7-CATT | -/- | -/+ | +/+ | 0.511 |
| 163 (5.48 ± 1.65) | 14 (6.05 ± 1.54) | 1 (4.63) | ||
| C/5-CATT | -/- | -/+ | +/+ | 0.071 |
| 165 (5.60 ± 1.61) | 13 (4.52 ± 1.80) | UD | ||
| C/6-CATT | -/- | -/+ | +/+ | 0.282 |
| 156 (5.46 ± 1.66) | 21 (5.93 ± 1.47) | 1 (6.91) | ||
| C/8-CATT | -/- | -/+ | +/+ | 0.070 |
| 177 (5.54 ± 1.63) | 1 (2.41) | UD |
Genotype and haplotype distributions, means, standard deviations (SD) of log [total IgE] and P-values (F-test about source significance) are shown for the multiple regression analysis of log [total IgE] with each locus type adjusted for age and sex. Log [total IgE] levels were significantly associated with age and sex in patients with atopic dermatitis (P = 0.0312). UD: undetectable.
Regression analysis for age- and sex-adjusted log [MIF] levels with the MIF polymorphisms in patients with atopic dermatitis.
| Locus | Genotype | |||
|---|---|---|---|---|
| -173 G>C | GG | GC | CC | 0.182 |
| 117 (6.03 ± 1.44) | 51 (5.60 ± 1.61) | 10 (5.43 ± 2.55) | ||
| -794 5-CATT | -/- | -/+ | +/+ | 0.803 |
| 58 (5.7 ± 1.55) | 88 (5.97 ± 1.61) | 32 (5.81 ± 1.57) | ||
| -794 7-CATT | -/- | -/+ | +/+ | 0.921 |
| 132 (5.86 ± 1.59) | 42 (5.95 ± 1.62) | 4 (5.66 ± 0.16) | ||
| G/5-CATT | -/- | -/+ | +/+ | 0.314 |
| 63 (5.62 ± 1.67) | 91 (6.01 ± 1.55) | 24 (6.05 ± 1.42) | ||
| G/6-CATT | -/- | -/+ | +/+ | 0.983 |
| 66 (5.87 ± 1.57) | 94 (5.89 ± 1.68) | 18 (5.85 ± 0.98) | ||
| G/7-CATT | -/- | -/+ | +/+ | 0.906 |
| 163 (5.86 ± 1.61) | 14 (6.07 ± 0.18) | 1 (5.81) | ||
| C/6-CATT | -/- | -/+ | +/+ | 0.090 |
| 156 (5.89 ± 1.58) | 21 (5.61 ± 1.48) | 1 (8.82) | ||
| C/7-CATT | -/- | -/+ | +/+ | 0.922 |
| 146 (5.88 ± 1.56) | 30 (5.86 ± 1.75) | 2 (5.62 ± 0.20) | ||
| C/8-CATT | -/- | -/+ | +/+ | UD |
| 177 (5.91±1.52) | 1 (0) | UD |
Genotype and haplotype distributions, means, standard deviations (SD) of log [MIF] and P-values (F-test about source significance) are shown for the multiple regression analysis of log [MIF] with each locus type adjusted for age and sex. Log [MIF] levels were not associated with age or sex in patients with atopic dermatitis (P = 0.1814). UD: undetectable.