Literature DB >> 27590322

Glycans and glycoproteins as specific biomarkers for cancer.

Muchena J Kailemia1, Dayoung Park1, Carlito B Lebrilla2.   

Abstract

Protein glycosylation and other post-translational modifications are involved in potentially all aspects of human growth and development. Defective glycosylation has adverse effects on human physiological conditions and accompanies many chronic and infectious diseases. Altered glycosylation can occur at the onset and/or during tumor progression. Identifying these changes at early disease stages may aid in making decisions regarding treatments, as early intervention can greatly enhance survival. This review highlights some of the efforts being made to identify N- and O-glycosylation profile shifts in cancer using mass spectrometry. The analysis of single or panels of potential glycoprotein cancer markers are covered. Other emerging technologies such as global glycan release and site-specific glycosylation analysis and quantitation are also discussed. Graphical Abstract Steps involved in the biomarker discovery.

Entities:  

Keywords:  Cancer; Disease biomarker; Glycomics; Glycoproteomics; Mass spectrometry; Site-specific glycosylation

Mesh:

Substances:

Year:  2016        PMID: 27590322      PMCID: PMC5203967          DOI: 10.1007/s00216-016-9880-6

Source DB:  PubMed          Journal:  Anal Bioanal Chem        ISSN: 1618-2642            Impact factor:   4.142


  141 in total

1.  Lectin affinity capture, isotope-coded tagging and mass spectrometry to identify N-linked glycoproteins.

Authors:  Hiroyuki Kaji; Haruna Saito; Yoshio Yamauchi; Takashi Shinkawa; Masato Taoka; Jun Hirabayashi; Ken-ichi Kasai; Nobuhiro Takahashi; Toshiaki Isobe
Journal:  Nat Biotechnol       Date:  2003-05-18       Impact factor: 54.908

2.  Development of serum glycoproteomic profiling technique; simultaneous identification of glycosylation sites and site-specific quantification of glycan structure changes.

Authors:  Koji Ueda; Sachiko Takami; Naomi Saichi; Yataro Daigo; Nobuhisa Ishikawa; Nobuoki Kohno; Masaru Katsumata; Akio Yamane; Minoru Ota; Taka-Aki Sato; Yusuke Nakamura; Hidewaki Nakagawa
Journal:  Mol Cell Proteomics       Date:  2010-09       Impact factor: 5.911

Review 3.  Mass spectrometry-based proteomics: from cancer biology to protein biomarkers, drug targets, and clinical applications.

Authors:  Connie R Jimenez; Henk M W Verheul
Journal:  Am Soc Clin Oncol Educ Book       Date:  2014

4.  A glycomics approach to the discovery of potential cancer biomarkers.

Authors:  Hyun Joo An; Carlito B Lebrilla
Journal:  Methods Mol Biol       Date:  2010

Review 5.  The carcinoembryonic antigen (CEA) family: structures, suggested functions and expression in normal and malignant tissues.

Authors:  S Hammarström
Journal:  Semin Cancer Biol       Date:  1999-04       Impact factor: 15.707

Review 6.  Application of nano-LC-based glycomics towards biomarker discovery.

Authors:  Serenus Hua; Carlito Lebrilla; Hyun Joo An
Journal:  Bioanalysis       Date:  2011-11       Impact factor: 2.681

7.  Alterations in the serum glycome due to metastatic prostate cancer.

Authors:  Zuzana Kyselova; Yehia Mechref; Mohammad M Al Bataineh; Lacey E Dobrolecki; Robert J Hickey; Jake Vinson; Christopher J Sweeney; Milos V Novotny
Journal:  J Proteome Res       Date:  2007-04-14       Impact factor: 4.466

8.  Byonic: advanced peptide and protein identification software.

Authors:  Marshall Bern; Yong J Kil; Christopher Becker
Journal:  Curr Protoc Bioinformatics       Date:  2012-12

9.  Discovery and verification of head-and-neck cancer biomarkers by differential protein expression analysis using iTRAQ labeling, multidimensional liquid chromatography, and tandem mass spectrometry.

Authors:  Ranju Ralhan; Leroi V Desouza; Ajay Matta; Satyendra Chandra Tripathi; Shaun Ghanny; Siddartha Datta Gupta; Sudhir Bahadur; K W Michael Siu
Journal:  Mol Cell Proteomics       Date:  2008-03-13       Impact factor: 5.911

10.  Comparison of digital rectal examination and serum prostate specific antigen in the early detection of prostate cancer: results of a multicenter clinical trial of 6,630 men.

Authors:  William J Catalona; Jerome P Richie; Frederick R Ahmann; M'Liss A Hudson; Peter T Scardino; Robert C Flanigan; Jean B DeKernion; Timothy L Ratliff; Louis R Kavoussi; Bruce L Dalkin; W Bedford Waters; Michael T MacFarlane; Paula C Southwick
Journal:  J Urol       Date:  1994-05       Impact factor: 7.450

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  90 in total

1.  Revisiting monosaccharide analysis - quantitation of a comprehensive set of monosaccharides using dynamic multiple reaction monitoring.

Authors:  Gege Xu; Matthew J Amicucci; Zhi Cheng; Ace G Galermo; Carlito B Lebrilla
Journal:  Analyst       Date:  2017-12-18       Impact factor: 4.616

2.  Glycomic profiling and the mammalian brain.

Authors:  Jennyfer Tena; Carlito B Lebrilla
Journal:  Proc Natl Acad Sci U S A       Date:  2021-01-05       Impact factor: 11.205

3.  Gangliosides profiling in serum of breast cancer patient: GM3 as a potential diagnostic biomarker.

Authors:  Qinying Li; Mei Sun; Mingsheng Yu; Qianyun Fu; Hao Jiang; Guangli Yu; Guoyun Li
Journal:  Glycoconj J       Date:  2019-07-11       Impact factor: 2.916

4.  Stage Dependence, Cell-Origin Independence, and Prognostic Capacity of Serum Glycan Fucosylation, β1-4 Branching, β1-6 Branching, and α2-6 Sialylation in Cancer.

Authors:  Shadi Ferdosi; Douglas S Rehder; Paul Maranian; Erik P Castle; Thai H Ho; Harvey I Pass; Daniel W Cramer; Karen S Anderson; Lei Fu; David E C Cole; Tao Le; Xifeng Wu; Chad R Borges
Journal:  J Proteome Res       Date:  2017-11-21       Impact factor: 4.466

5.  Surface Glycoproteomic Analysis Reveals That Both Unique and Differential Expression of Surface Glycoproteins Determine the Cell Type.

Authors:  Suttipong Suttapitugsakul; Lindsey D Ulmer; Chendi Jiang; Fangxu Sun; Ronghu Wu
Journal:  Anal Chem       Date:  2019-05-03       Impact factor: 6.986

6.  Systematic and site-specific analysis of N-glycoproteins on the cell surface by integrating bioorthogonal chemistry and MS-based proteomics.

Authors:  Fangxu Sun; Ronghu Wu
Journal:  Methods Enzymol       Date:  2019-07-29       Impact factor: 1.600

7.  Glycation of collagen matrices promotes breast tumor cell invasion.

Authors:  Young Joon Suh; Matthew S Hall; Yu Ling Huang; So Youn Moon; Wei Song; Minglin Ma; Lawrence J Bonassar; Jeffrey E Segall; Mingming Wu
Journal:  Integr Biol (Camb)       Date:  2019-05-01       Impact factor: 2.192

Review 8.  Glycoproteomic markers of hepatocellular carcinoma-mass spectrometry based approaches.

Authors:  Jianhui Zhu; Elisa Warner; Neehar D Parikh; David M Lubman
Journal:  Mass Spectrom Rev       Date:  2018-11-25       Impact factor: 10.946

Review 9.  Serum glycoprotein-derived N- and O-linked glycans as cancer biomarkers.

Authors:  Ying Lan; Cui Hao; Xuan Zeng; Yanli He; Pengjiao Zeng; Zhihua Guo; Lijuan Zhang
Journal:  Am J Cancer Res       Date:  2016-11-01       Impact factor: 6.166

Review 10.  Global and site-specific analysis of protein glycosylation in complex biological systems with Mass Spectrometry.

Authors:  Haopeng Xiao; Fangxu Sun; Suttipong Suttapitugsakul; Ronghu Wu
Journal:  Mass Spectrom Rev       Date:  2019-01-03       Impact factor: 10.946

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