Literature DB >> 27586415

Genetically distinct genogroup IV norovirus strains identified in wastewater.

Masaaki Kitajima1, Andri T Rachmadi2, Brandon C Iker3,4, Eiji Haramoto5, Charles P Gerba3.   

Abstract

We investigated the prevalence and genetic diversity of genogroup IV norovirus (GIV NoV) strains in wastewater in Arizona, United States, over a 13-month period. Among 50 wastewater samples tested, GIV NoVs were identified in 13 (26 %) of the samples. A total of 47 different GIV NoV strains were identified, which were classified into two genetically distinct clusters: the GIV.1 human cluster and a unique genetic cluster closely related to strains previously identified in Japanese wastewater. The results provide additional evidence of the considerable genetic diversity among GIV NoV strains through the analysis of wastewater containing virus strains shed from all populations.

Entities:  

Keywords:  Arizona; Genetic diversity; Norovirus; Seminested PCR; Wastewater treatment plant

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Substances：

Year:  2016        PMID： 27586415     DOI： 10.1007/s00705-016-3036-z

Source DB:  PubMed          Journal:  Arch Virol        ISSN： 0304-8608            Impact factor:   2.574


  6 in total

1.  Surveillance of Noroviruses in Rio De Janeiro, Brazil: Occurrence of New GIV Genotype in Clinical and Wastewater Samples.

Authors:  Julia Monassa Fioretti; Tulio Machado Fumian; Mônica Simões Rocha; Ingrid de Arruda Lucena Dos Santos; Filipe Aníbal Carvalho-Costa; Matheus Ribeiro de Assis; Janaina de Souza Rodrigues; José Paulo Gagliardi Leite; Marize Pereira Miagostovich
Journal:  Food Environ Virol       Date:  2017-06-21       Impact factor: 2.778

2.  Genetic and Epidemiologic Trends of Norovirus Outbreaks in the United States from 2013 to 2016 Demonstrated Emergence of Novel GII.4 Recombinant Viruses.

Authors:  Jennifer L Cannon; Leslie Barclay; Nikail R Collins; Mary E Wikswo; Christina J Castro; Laura Cristal Magaña; Nicole Gregoricus; Rachel L Marine; Preeti Chhabra; Jan Vinjé
Journal:  J Clin Microbiol       Date:  2017-05-10       Impact factor: 5.948

3.  Norovirus Seroprevalence among Adults in the United States: Analysis of NHANES Serum Specimens from 1999-2000 and 2003-2004.

Authors:  Amy E Kirby; Yvonne Kienast; Wanzhe Zhu; Jerusha Barton; Emeli Anderson; Melissa Sizemore; Jan Vinje; Christine L Moe
Journal:  Viruses       Date:  2020-02-05       Impact factor: 5.048

Review 4.  Occurrence of Human Enteric Viruses in Water Sources and Shellfish: A Focus on Africa.

Authors:  Nicole S Upfold; Garry A Luke; Caroline Knox
Journal:  Food Environ Virol       Date:  2021-01-27       Impact factor: 2.778

Review 5.  Occurrence of various viruses and recent evidence of SARS-CoV-2 in wastewater systems.

Authors:  Waqar Ali; Hua Zhang; Zhenglu Wang; Chuanyu Chang; Asif Javed; Kamran Ali; Wei Du; Nabeel Khan Niazi; Kang Mao; Zhugen Yang
Journal:  J Hazard Mater       Date:  2021-02-19       Impact factor: 14.224

6.  Rare Norovirus GIV Foodborne Outbreak, Wisconsin, USA.

Authors:  Leslie Barclay; Tim Davis; Jan Vinjé
Journal:  Emerg Infect Dis       Date:  2021-04       Impact factor: 6.883
  6 in total

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