| Literature DB >> 27574578 |
Aydin Saribudak1, Herman Kucharavy2, Karen Hubbard2, Muharrem Umit Uyar1.
Abstract
In evaluation of cell viability and apoptosis, spatial heterogeneity is quantified for cancerous cells cultured in 3-D in vitro cell-based assays under the impact of anti-cancer agents. In 48-h experiments using human colorectal cancer cell lines of HCT-116, SW-620, and SW-480, incubated cells are divided into control and drug administered groups, to be grown in matrigel and FOLFOX solution, respectively. Our 3-D cell tracking and data acquisition system guiding an inverted microscope with a digital camera is utilized to capture bright field and fluorescent images of colorectal cancer cells at multiple time points. Identifying the locations of live and dead cells in captured images, spatial point process and Voronoi tessellation methods are applied to extract morphological features of in vitro cell-based assays. For the former method, spatial heterogeneity is quantified with the second-order functions of Poisson point process, whereas the deviation in the area of Voronoi polygons is computed for the latter. With both techniques, the results indicate that the spatial heterogeneity of live cell locations increases as the viability of in in vitro cell cultures decreases. On the other hand, a decrease is observed for the heterogeneity of dead cell locations with the decrease in cell viability. This relationship between morphological features of in vitro cell-based assays and cell viability can be used for drug efficacy measurements and utilized as a biomarker for 3-D in vitro microenvironment assays.Entities:
Keywords: Cell viability; FOLFOX treatment; Voronoi tessellation; cell apoptosis; colorectal cancer cell lines; in-vitro cell based assays; morphological features; poisson point process; spatial analysis methods; spatial heterogeneity
Year: 2016 PMID: 27574578 PMCID: PMC4993133 DOI: 10.1109/JTEHM.2016.2578331
Source DB: PubMed Journal: IEEE J Transl Eng Health Med ISSN: 2168-2372 Impact factor: 3.316