Literature DB >> 27571979

Altered carbon turnover processes and microbiomes in soils under long-term extremely high CO2 exposure.

Felix Beulig1, Tim Urich2,3, Martin Nowak4, Susan E Trumbore4, Gerd Gleixner4, Gregor D Gilfillan5, Kristine E Fjelland5, Kirsten Küsel1,6.   

Abstract

There is only limited understanding of the impact of high p(CO2) on soil biomes. We have studied a floodplain wetland where long-term emanations of temperate volcanic CO2 (mofettes) are associated with accumulation of carbon from the Earth's mantle. With an integrated approach using isotope geochemistry, soil activity measurements and multi-omics analyses, we demonstrate that high (nearly pure) CO2 concentrations have strongly affected pathways of carbon production and decomposition and therefore carbon turnover. In particular, a promotion of dark CO2 fixation significantly increased the input of geogenic carbon in the mofette when compared to a reference wetland soil exposed to normal levels of CO2. Radiocarbon analysis revealed that high quantities of mofette soil carbon originated from the assimilation of geogenic CO2 (up to 67%) via plant primary production and subsurface CO2 fixation. However, the preservation and accumulation of almost undegraded organic material appeared to be facilitated by the permanent exclusion of meso- to macroscopic eukaryotes and associated physical and/or ecological traits rather than an impaired biochemical potential for soil organic matter decomposition. Our study shows how CO2-induced changes in diversity and functions of the soil community can foster an unusual biogeochemical profile.

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Year:  2016        PMID: 27571979     DOI: 10.1038/nmicrobiol.2015.25

Source DB:  PubMed          Journal:  Nat Microbiol        ISSN: 2058-5276            Impact factor:   17.745


  33 in total

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Journal:  Appl Environ Microbiol       Date:  1994-10       Impact factor: 4.792

3.  Three genomes from the phylum Acidobacteria provide insight into the lifestyles of these microorganisms in soils.

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Journal:  Appl Environ Microbiol       Date:  2009-02-05       Impact factor: 4.792

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5.  Profiling Chlamydomonas metabolism under dark, anoxic H2-producing conditions using a combined proteomic, transcriptomic, and metabolomic approach.

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Authors:  Thomas Schneider; Katharina M Keiblinger; Emanuel Schmid; Katja Sterflinger-Gleixner; Günther Ellersdorfer; Bernd Roschitzki; Andreas Richter; Leo Eberl; Sophie Zechmeister-Boltenstern; Kathrin Riedel
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9.  Simultaneous assessment of soil microbial community structure and function through analysis of the meta-transcriptome.

Authors:  Tim Urich; Anders Lanzén; Ji Qi; Daniel H Huson; Christa Schleper; Stephan C Schuster
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10.  Metabolic and trophic interactions modulate methane production by Arctic peat microbiota in response to warming.

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  11 in total

1.  Microbial ecology: Linking omics to biogeochemistry.

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Journal:  Nat Microbiol       Date:  2016-01-27       Impact factor: 17.745

2.  Low abundance of Archaeorhizomycetes among fungi in soil metatranscriptomes.

Authors:  Michal Choma; Jiří Bárta; Hana Šantrůčková; Tim Urich
Journal:  Sci Rep       Date:  2016-12-23       Impact factor: 4.379

3.  IMP: a pipeline for reproducible reference-independent integrated metagenomic and metatranscriptomic analyses.

Authors:  Shaman Narayanasamy; Yohan Jarosz; Emilie E L Muller; Anna Heintz-Buschart; Malte Herold; Anne Kaysen; Cédric C Laczny; Nicolás Pinel; Patrick May; Paul Wilmes
Journal:  Genome Biol       Date:  2016-12-16       Impact factor: 13.583

4.  Microbiological and Geochemical Survey of CO2-Dominated Mofette and Mineral Waters of the Cheb Basin, Czech Republic.

Authors:  Patryk Krauze; Horst Kämpf; Fabian Horn; Qi Liu; Andrey Voropaev; Dirk Wagner; Mashal Alawi
Journal:  Front Microbiol       Date:  2017-12-11       Impact factor: 5.640

5.  CO2 leakage alters biogeochemical and ecological functions of submarine sands.

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Journal:  Sci Adv       Date:  2018-02-07       Impact factor: 14.136

6.  Influence of CO2 Degassing on the Microbial Community in a Dry Mofette Field in Hartoušov, Czech Republic (Western Eger Rift).

Authors:  Qi Liu; Horst Kämpf; Robert Bussert; Patryk Krauze; Fabian Horn; Tobias Nickschick; Birgit Plessen; Dirk Wagner; Mashal Alawi
Journal:  Front Microbiol       Date:  2018-11-21       Impact factor: 5.640

7.  Holistic Assessment of Rumen Microbiome Dynamics through Quantitative Metatranscriptomics Reveals Multifunctional Redundancy during Key Steps of Anaerobic Feed Degradation.

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Journal:  mSystems       Date:  2018-08-07       Impact factor: 6.496

8.  Microbiomes in Soils Exposed to Naturally High Concentrations of CO2 (Bossoleto Mofette Tuscany, Italy).

Authors:  Stefano Fazi; Fabrizio Ungaro; Stefania Venturi; Lara Vimercati; Carolina Cruz Viggi; Silvia Baronti; Francesca Ugolini; Costanza Calzolari; Franco Tassi; Orlando Vaselli; Antonio Raschi; Federico Aulenta
Journal:  Front Microbiol       Date:  2019-10-04       Impact factor: 5.640

9.  The soil microbial food web revisited: Predatory myxobacteria as keystone taxa?

Authors:  Sebastian Petters; Verena Groß; Andrea Söllinger; Michelle Pichler; Anne Reinhard; Mia Maria Bengtsson; Tim Urich
Journal:  ISME J       Date:  2021-03-21       Impact factor: 11.217

10.  Short-term effects of CO2 leakage on the soil bacterial community in a simulated gas leakage scenario.

Authors:  Jing Ma; Wangyuan Zhang; Shaoliang Zhang; Qianlin Zhu; Qiyan Feng; Fu Chen
Journal:  PeerJ       Date:  2017-11-14       Impact factor: 2.984

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