| Literature DB >> 27565956 |
Marketa Novakova1,2, Francisco B Costa3, Frantisek Krause4, Ivan Literak5,6, Marcelo B Labruna3.
Abstract
BACKGROUND: Recently, a new rickettsia named 'Candidatus Rickettsia vini' belonging to the spotted fever group has been molecularly detected in Ixodes arboricola ticks in Spain, the Czech Republic, Slovakia and Turkey, with prevalence reaching up to 100 %. The aim of this study was to isolate this rickettsia in pure culture, and to describe it as a new Rickettsia species.Entities:
Keywords: Czech Republic; Ixodes arboricola; Ixodidae; Nidicolous ticks; Ornitophilic ticks; Rickettsia vini; Rickettsiae; Spotted fever group; Ticks; Tree-hole tick
Mesh:
Year: 2016 PMID: 27565956 PMCID: PMC5000463 DOI: 10.1186/s13071-016-1742-8
Source DB: PubMed Journal: Parasit Vectors ISSN: 1756-3305 Impact factor: 3.876
Primer pairs used for amplification of rickettsial genes
| Target gene, primer pair no., primer name | Specifity | Sequence | Amplified fragment (nt) | Reference | |
|---|---|---|---|---|---|
|
| Genus | ||||
| 1 | CS-78 | 5'-GCAAGTATCGGTGAGGATGTAAT-3' | 401 | [ | |
| CS-323 | 5'-GCTTCCTTAAAATTCAATAAATCAGGAT-3' | [ | |||
| 2 | CS-239 | 5'-GCTCTTCTCATCCTATGGCTATTAT-3' | 834 | [ | |
| CS-1069 | 5'-CAGGGTCTTCGTGCATTTCTT-3' | [ | |||
|
| Spotted fever group (SFG) | ||||
| 3 | Rr190.70p | 5'-ATGGCGAATATTTCTCCAAAA-3' | 632 | [ | |
| 190-701 | 5'-GTTCCGTTAATGGCAGCATCT-3' | [ | |||
|
| Genus | ||||
| 4 | 120-M59 | 5'-CCGCAGGGTTGGTAACTGC-3' | 820 | [ | |
| 120-807 | 5'-CCTTTTAGATTACCGCCTAA-3' | [ | |||
|
| Genus | ||||
| 5 | 17k-5 | 5'-GCTTTACAAAATTCTAAAAACCATATA-3' | 549 | [ | |
| 17k-3 | 5'-TGTCTATCAATTCACAACTTGCC-3' | [ | |||
aExcept for some species of basal groups (e.g. Rickettsia bellii)
Fig. 1Vero cells infected by Rickettsia vini n. sp. strain Breclav visualized by Gimenez staining
Homologous and heterologous endpoint titers of IgG to seven Rickettsia species in animal sera
| Species | Chickens infested with | Animals inoculated with | |||||
|---|---|---|---|---|---|---|---|
| Chicken A | Chicken B | Chicken C | Chicken D | Chicken E | Guinea pig A | Guinea pig B | |
|
| –a | – | – | 128 | 512 | 512 | 128 |
|
| – | – | – | 64 | 64 | 512 | – |
|
| – | – | – | – | – | – | – |
| ‘ | – | – | – | 128 | 64 | 256 | – |
|
| – | – | – | – | – | – | NT |
|
| – | – | – | – | 256 | – | – |
|
| – | – | – | – | – | – | – |
a–, negative at the 1:64 serum dilution
Abbreviation: NT not tested
Fig. 2Molecular phylogenetic analysis of Rickettsia vini n. sp. isolated from the tick Ixodes arboricola (Czech Republic). A total of 2979 unambiguously aligned nucleotide sites of the rickettsial genes gltA, ompA, ompB, and htrA were concatenated and subjected to analysis by the Maximum Likelihood method. The bootstrap values obtained by 1000 replicates are shown at the nodes. The tree is drawn to scale; scale-bar indicates nucleotide substitutions (%) per site. The GenBank accession numbers of the sequences included in this analysis are shown in Additional files 1, 2, 3 and 4