| Literature DB >> 27565144 |
Anna Goncerzewicz1, Anna Misiewicz2, Lubomiła Owczarek3, Urszula Jasińska3, Sylwia Skąpska3.
Abstract
The number of people who cannot consume dairy products due to intolerance or allergies to food components is increasing. Consumers are increasingly searching for alternative, nondairy beverages which have an advantageous effect on the body and which stimulate gut microflora. Previous studies have shown that Streptococcus thermophilus TKM3 KKP 2030p can be an efficient starter culture for the fermentation of plant material and can also ensure an acceptable sensory profile and a high number of lactic acid bacteria during 4 week cold storage. The aim of this study was to determine the relative gene expression of the L-lactate dehydrogenase gene (ldhL) in selected strain using the RT qPCR technique at particular time points. The gene expression experiments were conducted in laboratory broth (LABm) and fruit-cereal (OBPromOat) matrix with a beta-glucan additive. Levels of gene relative expression in the selected strain in these two media were correlated with the amount of L-lactate produced. The results showed that the plant matrix stimulated stronger ldhL gene expression in the first 4 h of the experiment (although the synthesis of L-lactate was less than in laboratory broth). This study broadens existing knowledge of the transcriptional mechanisms which arise from the adaptation of the analyzed strain to different habitats during L-lactate synthesis. This could contribute to the development of new alternative food products for people who show intolerance to milk proteins or lactose.Entities:
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Year: 2016 PMID: 27565144 PMCID: PMC5059402 DOI: 10.1007/s00284-016-1126-5
Source DB: PubMed Journal: Curr Microbiol ISSN: 0343-8651 Impact factor: 2.188
Genes and primers used for the PCR and RT qPCR experiments
| Primer | Sequence (5′ → 3′) | Gene | Amplicon sizes | Application | Efficiency |
|---|---|---|---|---|---|
|
| 5′AAGTCATCCTTGTTGGTGACGG3′ |
| 859 | PCR | – |
|
| 5′TTCAATGGGATGTTTACTGGACG3′ | ||||
|
| 5′ATTTGAAAAAGCCGTTGGTG3′ |
| 102 | RT qPCR | 2.00 |
|
| 5′GCATCCGCACAGTCTTCATA3′ | ||||
| 16STkM3_RTU | 5′TTCTTGGATGAGTTGCGAACG3′ |
| 74 | RT qPCR | 1.96 |
| 16STkM3_RTL | 5′GTTTCCAATAGTTATCCCCCGC3′ | ||||
| gyrB_RT_F | 5′GCTCGCTATCACAAGTTGGT3′ |
| 120 | RT qPCR | 1.96 |
| gyrB_RT_R | 5′GACATAGCCAGCTTCCAAGA3′ | ||||
| recA_RT_F | 5′AGCCATGCGTAAACTTTCTG3′ |
| 119 | RT qPCR | 1.99 |
| recA_RT_R | 5′GTCCACCTGGGGTAGTCTCT3′ | ||||
| gyrA_RT_F | 5′CCCCTCAATACGTTTTTCCT3′ |
| 100 | RT qPCR | 1.86 |
| gyrB_RT_R | 5′TCGTGAGCGCATTGTAGTTA3′ |
Mono- and disaccharide concentrations
| Sucrose (g kg−1) | Glucose (g kg−1) | Fructose (g kg−1) | |
|---|---|---|---|
| OBPromOat matrix before fermentation | 57.92 ± | 4.27 ± | 4.25 ± |
| OBPromOat matrix after fermentation | 52.16 ± | 3.94 ± | 5.36 ± |
Fig. 1The acidifying activity of the S. thermophilus TKM3 KKP 2030p strain in (filled circle) OBPromOat matrix and (filled triangle) LABm broth
Fig. 2Changes in l-lactic acid enantiomer (l-LA) content (solid line) and percentage contribution of l-LA to the total LA content (dotted line) in (filled circle) OBPromOat matrix and (filled triangle) LABm broth under fermentation with the selected strain
Descriptive statistics of candidate reference gene expression for all samples analyzed by BestKeeper 1.0
|
|
|
|
| |
|---|---|---|---|---|
| N | 17 | 22 | 19 | 17 |
| GM [Cq] | 9.08 | 23.96 | 25.20 | 13.02 |
| AM [Cq] | 10.41 | 23.99 | 25.22 | 13.23 |
| Min [Cq] | 2.12 | 21.21 | 21.56 | 10.54 |
| Max [Cq] | 18.62 | 25.73 | 26.40 | 19.87 |
| SD [±Cq] | 3.56 | 0.94 | 0.89 | 1.79 |
| CV [% Cq] | 34.24 | 3.93 | 3.54 | 13.50 |
| Min [x-fold] | −108.46 | −6.35 | −12.21 | −5.31 |
| Max [x-fold] | 612.27 | 3.30 | 2.29 | 100.32 |
| SD [±x-fold] | 11.00 | 1.89 | 1.82 | 3.32 |
N number of samples, GM [Cq] geometric mean of Cq, AM [Cq] arithmetic mean of Cq, Min [Cq] and Max [Cq] extreme values of Cq, SD [±Cq] standard deviation of the Cq, CV [% Cq] coefficient of variance expressed as a percentage on the Cq level, Min [x-fold], minimum value expressed as folds of expression, Max [x-fold] maximum value expressed as fold of expression, SD [±x-fold] standard deviation in fold of expression
Fig. 3Lactate dehydrogenase (ldhL) gene expression for S. thermophilus TKM3 KKP 2030p strain during fermentation in (black bars) OBPromOat matrix and (gray bars) LABm medium. Different letters above bars represent significant effect of time and medium (P < 0.05), as well as a significant interaction (time × medium) between these two variables (P < 0.05). Factor “a” referred to 24-h; factor “b” referred to 0 and 1-h; factor “ab” referred to 4-, 6-, and 7-h. Factor A and B, referred, respectively, as medium LABm and OBPromOat