| Literature DB >> 27547316 |
Thomas H Selby1, Kristen M Hart2, Ikuko Fujisaki1, Brian J Smith1, Clayton J Pollock3, Zandy Hillis-Starr3, Ian Lundgren4, Madan K Oli5.
Abstract
Submerged passive acoustic technology allows researchers to investigate spatial and temporal movement patterns of many marine and freshwater species. The technology uses receivers to detect and record acoustic transmissions emitted from tags attached to an individual. Acoustic signal strength naturally attenuates over distance, but numerous environmental variables also affect the probability a tag is detected. Knowledge of receiver range is crucial for designing acoustic arrays and analyzing telemetry data. Here, we present a method for testing a relatively large-scale receiver array in a dynamic Caribbean coastal environment intended for long-term monitoring of multiple species. The U.S. Geological Survey and several academic institutions in collaboration with resource management at Buck Island Reef National Monument (BIRNM), off the coast of St. Croix, recently deployed a 52 passive acoustic receiver array. We targeted 19 array-representative receivers for range-testing by submersing fixed delay interval range-testing tags at various distance intervals in each cardinal direction from a receiver for a minimum of an hour. Using a generalized linear mixed model (GLMM), we estimated the probability of detection across the array and assessed the effect of water depth, habitat, wind, temperature, and time of day on the probability of detection. The predicted probability of detection across the entire array at 100 m distance from a receiver was 58.2% (95% CI: 44.0-73.0%) and dropped to 26.0% (95% CI: 11.4-39.3%) 200 m from a receiver indicating a somewhat constrained effective detection range. Detection probability varied across habitat classes with the greatest effective detection range occurring in homogenous sand substrate and the smallest in high rugosity reef. Predicted probability of detection across BIRNM highlights potential gaps in coverage using the current array as well as limitations of passive acoustic technology within a complex coral reef environment.Entities:
Keywords: Caribbean reef; VR2W; passive acoustic telemetry; range‐testing
Year: 2016 PMID: 27547316 PMCID: PMC4979710 DOI: 10.1002/ece3.2228
Source DB: PubMed Journal: Ecol Evol ISSN: 2045-7758 Impact factor: 2.912
Figure 1Location of Buck Island Reef National Monument (BIRNM). (A). Map showing the location of BIRNM within the Caribbean region. (B). The 73.4 km2 BIRNM with the boundary outlined in red.
Figure 2Bathymetry of the Buck Island Reef National Monument (BIRNM) Array. Binned bathymetry of array surrounding Buck Island. VR2W locations with numbers indicate receivers where preliminary 48‐h testing occurred.
Figure 3Benthic structure of Buck Island Reef National Monument (BIRNM) array. The location of VR2W receivers comprising the BIRNM (BIRNM) array dispersed throughout the various benthic structures along with the points where range‐testing events occurred. Benthic structure categories were binned according to similarity in rugosity.
Figure 4Range‐testing Tackle. Tackle used to deploy range‐testing transmitters at predetermined locations. Red arrow highlights the location of the range‐testing tag.
Model output and rankings
| Model | Parameters | AICc | Δ AICc | Weight | Marginal | Conditional | |
|---|---|---|---|---|---|---|---|
| M.1 | thab+rhab+dep+distsc+windsp+temp+tod (full) | 16 | 14,143.92 | 0.00 | 0.84 | 0.58 | 0.86 |
| M.2 | thab+dep+distsc+windsp+temp+tod | 13 | 14,147.17 | 3.25 | 0.16 | 0.53 | 0.88 |
| M.3 | thab+distsc+windsp+temp+tod | 11 | 14,255.75 | 111.82 | 0.00 | 0.52 | 0.88 |
| M.4 | dep+distsc+windsp+temp+tod | 10 | 15,022.75 | 878.83 | 0.00 | 0.54 | 0.86 |
| M.5 | rhab+distsc+windsp+temp+tod | 11 | 15,189.14 | 1045.22 | 0.00 | 0.58 | 0.83 |
| M.6 | distsc | 3 | 16,322.25 | 2178.33 | 0.00 | 0.49 | 0.81 |
| M.7 | thab+rhab+dep+windsp+temp+tod | 15 | 22,788.55 | 8643.57 | 0.00 | 0.10 | 0.45 |
| M.8 | null | 2 | 23,751.28 | 9607.36 | 0.00 | 0.00 | 0.40 |
A subset of generalized linear mixed models (GLMM) tested with the number of parameters in each model, Akaike information criterion (AICc), difference in model AICc (ΔAICc), the model weight, coefficient of determination for the fixed effect variables (marginal R 2), pseudocoefficient of determination for both fixed and random effects (conditional R 2); categorical variables include thab = transmitter habitat variable (low rugosity hard bottom, homogenous sand, high rugosity reef, and mixed hard bottom with sand channels), rhab = receiver habitat (low rugosity hard bottom, homogenous sand, high rugosity reef, and mixed hard bottom with sand channels) dep = depth class (0–5, 5–10, 10–15 m), time = time of day (06:00:00–10:59:59, 11:00:00–15:59:59, 16:00:00–19:59:59, and 20:00:00–05:59:59), continuous variables include dist = distance to receiver (m), windsp = wind speed (m/sec). Every model included receiver where detections occurred as an additive random effect.
Figure 5Predicted probability of detection over distance from receiver for each receiver habitat. Predicted probability of detection based on the full model for each benthic structure class (high rugosity reef, mixed hard bottom with sand channels, low rugosity hard bottom, and homogenous sand) using the average wind speed and sea surface temperature, and the 5‐10 m depth category during the afternoon time of day category. The red line denotes the 0.5 probability of detection for a transmitter (effective detection range). The black triangles reference the distance at which detection probability drops below 50%.
Model summary for fixed effect variables
| Fixed effects | Estimate | SE |
| Pr(>| |
|---|---|---|---|---|
| Transmitter Benthic Structure | ||||
| Low rugosity hard bottom | 1.71 | 0.06 | 27.96 | <0.001 |
| Mixed hard bottom w/sand channels | 0.64 | 0.1 | 6.37 | <0.001 |
| High rugosity reef | 1.05 | 0.08 | 13.63 | <0.001 |
| Receiver Benthic Structure | ||||
| Low rugosity hard bottom | −3.72 | 1.33 | −2.79 | 0.005 |
| Mixed hard bottom w/sand channels | −4.29 | 2.68 | −1.6 | 0.109 |
| High rugosity reef | −3.64 | 1.95 | −1.87 | 0.062 |
| Time of Day | ||||
| Afternoon | 0.12 | 0.05 | 2.42 | 0.02 |
| Evening | 0.35 | 0.06 | 6.32 | <0.001 |
| Night | 0.60 | 0.05 | 12.35 | <0.001 |
| Depth | ||||
| 0–5 m | −0.54 | 0.1 | −5.27 | <0.001 |
| 5–10 m | −0.77 | 0.08 | −9.82 | <0.001 |
Table showing the estimate, standard error, z‐value, and P‐value for the categorical variables transmitter habitat, receiver habitat, time of day, and depth from the full model. Homogenous sand, morning, and 10–20 m were used as the reference categories for transmitter habitat, receiver habitat, time of day, and depth, respectively.
Figure 6Preliminary 48‐h detection histories. Bar plots show the number of detections during each hour of the day for both transmitters deployed on each of the four receivers. Distance to receiver was staggered with the closer one denoted by green and the farther one red. Gray shading represents hours designated as night‐time.
Figure 7Predicted detection probability across the Buck Island Reef National Monument (BIRNM) array. Predicted probability of detecting an acoustic transmitter at BIRNM based on the full model.
Figure 8Predicted detection probability across the Buck Island shelf. Predicted probability of detecting an acoustic transmitter at Buck Island Reef National Monument (BIRNM) with distance from receiver held constant at 100 m. Map shows the relative suitability of a location for additional receivers given the habitat and depth of the area.