Literature DB >> 27543335

Reply to Watkins et al.: Whole-genome sequencing-based identification of diverse tandem duplicator phenotypes in human cancers.

Francesca Menghi1, Edison T Liu2.   

Abstract

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Year:  2016        PMID: 27543335      PMCID: PMC5018774          DOI: 10.1073/pnas.1610624113

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


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  5 in total

1.  Tandem duplications contribute to not one but two distinct phenotypes.

Authors:  Johnathan Watkins; Andrew Tutt; Anita Grigoriadis
Journal:  Proc Natl Acad Sci U S A       Date:  2016-08-19       Impact factor: 11.205

2.  Ovarian Cancers Harboring Inactivating Mutations in CDK12 Display a Distinct Genomic Instability Pattern Characterized by Large Tandem Duplications.

Authors:  Tatiana Popova; Elodie Manié; Valentina Boeva; Aude Battistella; Oumou Goundiam; Nicholas K Smith; Christopher R Mueller; Virginie Raynal; Odette Mariani; Xavier Sastre-Garau; Marc-Henri Stern
Journal:  Cancer Res       Date:  2016-01-19       Impact factor: 12.701

3.  The tandem duplicator phenotype as a distinct genomic configuration in cancer.

Authors:  Francesca Menghi; Koichiro Inaki; XingYi Woo; Pooja A Kumar; Krzysztof R Grzeda; Ankit Malhotra; Vinod Yadav; Hyunsoo Kim; Eladio J Marquez; Duygu Ucar; Phung T Shreckengast; Joel P Wagner; George MacIntyre; Krishna R Murthy Karuturi; Ralph Scully; James Keck; Jeffrey H Chuang; Edison T Liu
Journal:  Proc Natl Acad Sci U S A       Date:  2016-04-07       Impact factor: 11.205

4.  Systems consequences of amplicon formation in human breast cancer.

Authors:  Koichiro Inaki; Francesca Menghi; Xing Yi Woo; Joel P Wagner; Pierre-Étienne Jacques; Yi Fang Lee; Phung Trang Shreckengast; Wendy WeiJia Soon; Ankit Malhotra; Audrey S M Teo; Axel M Hillmer; Alexis Jiaying Khng; Xiaoan Ruan; Swee Hoe Ong; Denis Bertrand; Niranjan Nagarajan; R Krishna Murthy Karuturi; Alfredo Hidalgo Miranda; Edison T Liu
Journal:  Genome Res       Date:  2014-09-03       Impact factor: 9.043

5.  Landscape of somatic mutations in 560 breast cancer whole-genome sequences.

Authors:  Serena Nik-Zainal; Helen Davies; Johan Staaf; Manasa Ramakrishna; Dominik Glodzik; Xueqing Zou; Inigo Martincorena; Ludmil B Alexandrov; Sancha Martin; David C Wedge; Peter Van Loo; Young Seok Ju; Marcel Smid; Arie B Brinkman; Sandro Morganella; Miriam R Aure; Ole Christian Lingjærde; Anita Langerød; Markus Ringnér; Sung-Min Ahn; Sandrine Boyault; Jane E Brock; Annegien Broeks; Adam Butler; Christine Desmedt; Luc Dirix; Serge Dronov; Aquila Fatima; John A Foekens; Moritz Gerstung; Gerrit K J Hooijer; Se Jin Jang; David R Jones; Hyung-Yong Kim; Tari A King; Savitri Krishnamurthy; Hee Jin Lee; Jeong-Yeon Lee; Yilong Li; Stuart McLaren; Andrew Menzies; Ville Mustonen; Sarah O'Meara; Iris Pauporté; Xavier Pivot; Colin A Purdie; Keiran Raine; Kamna Ramakrishnan; F Germán Rodríguez-González; Gilles Romieu; Anieta M Sieuwerts; Peter T Simpson; Rebecca Shepherd; Lucy Stebbings; Olafur A Stefansson; Jon Teague; Stefania Tommasi; Isabelle Treilleux; Gert G Van den Eynden; Peter Vermeulen; Anne Vincent-Salomon; Lucy Yates; Carlos Caldas; Laura van't Veer; Andrew Tutt; Stian Knappskog; Benita Kiat Tee Tan; Jos Jonkers; Åke Borg; Naoto T Ueno; Christos Sotiriou; Alain Viari; P Andrew Futreal; Peter J Campbell; Paul N Span; Steven Van Laere; Sunil R Lakhani; Jorunn E Eyfjord; Alastair M Thompson; Ewan Birney; Hendrik G Stunnenberg; Marc J van de Vijver; John W M Martens; Anne-Lise Børresen-Dale; Andrea L Richardson; Gu Kong; Gilles Thomas; Michael R Stratton
Journal:  Nature       Date:  2016-05-02       Impact factor: 49.962

  5 in total
  2 in total

1.  Mechanism of tandem duplication formation in BRCA1-mutant cells.

Authors:  Nicholas A Willis; Richard L Frock; Francesca Menghi; Erin E Duffey; Arvind Panday; Virginia Camacho; E Paul Hasty; Edison T Liu; Frederick W Alt; Ralph Scully
Journal:  Nature       Date:  2017-11-22       Impact factor: 49.962

2.  The Tandem Duplicator Phenotype Is a Prevalent Genome-Wide Cancer Configuration Driven by Distinct Gene Mutations.

Authors:  Francesca Menghi; Floris P Barthel; Vinod Yadav; Ming Tang; Bo Ji; Zhonghui Tang; Gregory W Carter; Yijun Ruan; Ralph Scully; Roel G W Verhaak; Jos Jonkers; Edison T Liu
Journal:  Cancer Cell       Date:  2018-07-12       Impact factor: 31.743

  2 in total

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