Literature DB >> 27541303

A spectral element method with adaptive segmentation for accurately simulating extracellular electrical stimulation of neurons.

Calvin D Eiber1,2, Socrates Dokos3, Nigel H Lovell3, Gregg J Suaning3.   

Abstract

The capacity to quickly and accurately simulate extracellular stimulation of neurons is essential to the design of next-generation neural prostheses. Existing platforms for simulating neurons are largely based on finite-difference techniques; due to the complex geometries involved, the more powerful spectral or differential quadrature techniques cannot be applied directly. This paper presents a mathematical basis for the application of a spectral element method to the problem of simulating the extracellular stimulation of retinal neurons, which is readily extensible to neural fibers of any kind. The activating function formalism is extended to arbitrary neuron geometries, and a segmentation method to guarantee an appropriate choice of collocation points is presented. Differential quadrature may then be applied to efficiently solve the resulting cable equations. The capacity for this model to simulate action potentials propagating through branching structures and to predict minimum extracellular stimulation thresholds for individual neurons is demonstrated. The presented model is validated against published values for extracellular stimulation threshold and conduction velocity for realistic physiological parameter values. This model suggests that convoluted axon geometries are more readily activated by extracellular stimulation than linear axon geometries, which may have ramifications for the design of neural prostheses.

Keywords:  Computer-assisted; Electric stimulation; Neural prostheses; Numerical analysis; Visual prosthesis

Mesh:

Year:  2016        PMID: 27541303     DOI: 10.1007/s11517-016-1558-x

Source DB:  PubMed          Journal:  Med Biol Eng Comput        ISSN: 0140-0118            Impact factor:   2.602


  30 in total

1.  Direct measurement of specific membrane capacitance in neurons.

Authors:  L J Gentet; G J Stuart; J D Clements
Journal:  Biophys J       Date:  2000-07       Impact factor: 4.033

2.  Direct activation and temporal response properties of rabbit retinal ganglion cells following subretinal stimulation.

Authors:  David Tsai; John W Morley; Gregg J Suaning; Nigel H Lovell
Journal:  J Neurophysiol       Date:  2009-09-09       Impact factor: 2.714

3.  Impulse encoding mechanisms of ganglion cells in the tiger salamander retina.

Authors:  J F Fohlmeister; R F Miller
Journal:  J Neurophysiol       Date:  1997-10       Impact factor: 2.714

Review 4.  Understanding the retina: a review of computational models of the retina from the single cell to the network level.

Authors:  Tianruo Guo; David Tsai; Siwei Bai; John W Morley; Gregg J Suaning; Nigel H Lovell; Socrates Dokos
Journal:  Crit Rev Biomed Eng       Date:  2014

5.  Comparison of spinal cord stimulation profiles from intra- and extradural electrode arrangements by finite element modelling.

Authors:  Qiujun Huang; Hiroyuki Oya; Oliver E Flouty; Chandan G Reddy; Matthew A Howard; George T Gillies; Marcel Utz
Journal:  Med Biol Eng Comput       Date:  2014-04-27       Impact factor: 2.602

6.  Analytical solution for time-dependent potentials in a fiber stimulated by an external electrode.

Authors:  Wanda Krassowska Neu
Journal:  Med Biol Eng Comput       Date:  2016-03-10       Impact factor: 2.602

7.  Origin of the electroretinogram in the intact macaque eye--II. Current source-density analysis.

Authors:  H Heynen; D van Norren
Journal:  Vision Res       Date:  1985       Impact factor: 1.886

8.  Analysis and control of the current distribution under circular dispersive electrodes.

Authors:  J D Wiley; J G Webster
Journal:  IEEE Trans Biomed Eng       Date:  1982-05       Impact factor: 4.538

9.  Characterization of high capacitance electrodes for the application of direct current electrical nerve block.

Authors:  Tina Vrabec; Niloy Bhadra; Jesse Wainright; Narendra Bhadra; Manfred Franke; Kevin Kilgore
Journal:  Med Biol Eng Comput       Date:  2015-09-11       Impact factor: 2.602

10.  Subretinal electronic chips allow blind patients to read letters and combine them to words.

Authors:  Eberhart Zrenner; Karl Ulrich Bartz-Schmidt; Heval Benav; Dorothea Besch; Anna Bruckmann; Veit-Peter Gabel; Florian Gekeler; Udo Greppmaier; Alex Harscher; Steffen Kibbel; Johannes Koch; Akos Kusnyerik; Tobias Peters; Katarina Stingl; Helmut Sachs; Alfred Stett; Peter Szurman; Barbara Wilhelm; Robert Wilke
Journal:  Proc Biol Sci       Date:  2010-11-03       Impact factor: 5.349

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  2 in total

1.  Computational modelling of nerve stimulation and recording with peripheral visceral neural interfaces.

Authors:  Calvin D Eiber; Sophie C Payne; Natalia P Biscola; Leif A Havton; Janet R Keast; Peregrine B Osborne; James B Fallon
Journal:  J Neural Eng       Date:  2021-11-25       Impact factor: 5.379

2.  Minimizing activation of overlying axons with epiretinal stimulation: The role of fiber orientation and electrode configuration.

Authors:  Timothy B Esler; Robert R Kerr; Bahman Tahayori; David B Grayden; Hamish Meffin; Anthony N Burkitt
Journal:  PLoS One       Date:  2018-03-01       Impact factor: 3.240

  2 in total

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