Literature DB >> 27521160

On the contribution of Angola to the initial spread of HIV-1.

Andrea-Clemencia Pineda-Peña1, Jorge Varanda2, João Dinis Sousa3, Kristof Theys4, Inês Bártolo5, Thomas Leitner6, Nuno Taveira7, Anne-Mieke Vandamme3, Ana B Abecasis8.   

Abstract

Angola borders and has long-term links with Democratic Republic of Congo (DRC) as well as high levels of Human Immunodeficiency Virus (HIV) genetic diversity, indicating a potential role in the initial spread of the HIV-1 pandemic. Herein, we analyze 564 C2V3 and 354 pol publicly available sequences from DRC, Republic of Congo (RC) and Angola to better understand the initial spread of the virus in this region. Phylogeographic analyses were performed with the BEAST software. While our results pinpoint the origin of the pandemic to Kinshasa (DRC) around 1906, the introduction of HIV-1 to Angola could have occurred early between the 1910s and 1940s. Furthermore, most of the HIV-1 migrations out of Kinshasa were directed not only to Lubumbashi and Mbuji-Mayi (DRC), but also to Luanda and Brazzaville. Kinshasa census records corroborate these findings, indicating that the early exportation of the virus to Angola might be related to the high number of Angolans in Kinshasa at that time, originated mostly from the North of Angola. In summary, our results place Angola at the epicenter of the early HIV dissemination, together with DRC and RC. Copyright Â
© 2016 Elsevier B.V. All rights reserved.

Entities:  

Keywords:  Angola; Group M; HIV-1; Origin; Phylogeography

Mesh:

Year:  2016        PMID: 27521160      PMCID: PMC5774217          DOI: 10.1016/j.meegid.2016.08.009

Source DB:  PubMed          Journal:  Infect Genet Evol        ISSN: 1567-1348            Impact factor:   3.342


  22 in total

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Authors:  F Gao; N Vidal; Y Li; S A Trask; Y Chen; L G Kostrikis; D D Ho; J Kim; M D Oh; K Choe; M Salminen; D L Robertson; G M Shaw; B H Hahn; M Peeters
Journal:  AIDS Res Hum Retroviruses       Date:  2001-05-20       Impact factor: 2.205

2.  HIV type 1 pol gene diversity and antiretroviral drug resistance mutations in the Democratic Republic of Congo (DRC).

Authors:  N Vidal; C Mulanga; S Edidi Bazepeo; J Kasali Mwamba; J Tshimpaka; M Kashi; N Mama; D Valéa; E Delaporte; F Lepira; M Peeters
Journal:  AIDS Res Hum Retroviruses       Date:  2006-02       Impact factor: 2.205

3.  Learning to count: robust estimates for labeled distances between molecular sequences.

Authors:  John D O'Brien; Vladimir N Minin; Marc A Suchard
Journal:  Mol Biol Evol       Date:  2009-01-08       Impact factor: 16.240

4.  SeaView version 4: A multiplatform graphical user interface for sequence alignment and phylogenetic tree building.

Authors:  Manolo Gouy; Stéphane Guindon; Olivier Gascuel
Journal:  Mol Biol Evol       Date:  2009-10-23       Impact factor: 16.240

5.  High genetic diversity of human immunodeficiency virus type 1 in Angola.

Authors:  Inês Bártolo; Marta Epalanga; José Bartolomeu; Marlene Fonseca; Ana Mendes; António Gama; Nuno Taveira
Journal:  AIDS Res Hum Retroviruses       Date:  2005-04       Impact factor: 2.205

6.  High HIV type 1 group M pol diversity and low rate of antiretroviral resistance mutations among the uniformed services in Kinshasa, Democratic Republic of the Congo.

Authors:  Cyrille F Djoko; Anne W Rimoin; Nicole Vidal; Ubald Tamoufe; Nathan D Wolfe; Christelle Butel; Matthew LeBreton; Felix M Tshala; Patrick K Kayembe; Jean Jacques Muyembe; Samuel Edidi-Basepeo; Brian L Pike; Joseph N Fair; Wilfred F Mbacham; Karen E Saylors; Eitel Mpoudi-Ngole; Eric Delaporte; Michael Grillo; Martine Peeters
Journal:  AIDS Res Hum Retroviruses       Date:  2010-10-18       Impact factor: 2.205

7.  Direct evidence of extensive diversity of HIV-1 in Kinshasa by 1960.

Authors:  Michael Worobey; Marlea Gemmel; Dirk E Teuwen; Tamara Haselkorn; Kevin Kunstman; Michael Bunce; Jean-Jacques Muyembe; Jean-Marie M Kabongo; Raphaël M Kalengayi; Eric Van Marck; M Thomas P Gilbert; Steven M Wolinsky
Journal:  Nature       Date:  2008-10-02       Impact factor: 49.962

8.  Improving Bayesian population dynamics inference: a coalescent-based model for multiple loci.

Authors:  Mandev S Gill; Philippe Lemey; Nuno R Faria; Andrew Rambaut; Beth Shapiro; Marc A Suchard
Journal:  Mol Biol Evol       Date:  2012-11-22       Impact factor: 16.240

9.  Relaxed phylogenetics and dating with confidence.

Authors:  Alexei J Drummond; Simon Y W Ho; Matthew J Phillips; Andrew Rambaut
Journal:  PLoS Biol       Date:  2006-03-14       Impact factor: 8.029

10.  Close phylogenetic relationship between Angolan and Romanian HIV-1 subtype F1 isolates.

Authors:  Monick L Guimarães; Ana Carolina P Vicente; Koko Otsuki; Rosa Ferreira F C da Silva; Moises Francisco; Filomena Gomes da Silva; Ducelina Serrano; Mariza G Morgado; Gonzalo Bello
Journal:  Retrovirology       Date:  2009-04-22       Impact factor: 4.602

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  5 in total

1.  Early infant diagnosis of HIV-1 infection in Luanda, Angola, using a new DNA PCR assay and dried blood spots.

Authors:  Francisco Martin; Claudia Palladino; Rita Mateus; Anna Bolzan; Perpétua Gomes; José Brito; Ana Patrícia Carvalho; Yolanda Cardoso; Cristovão Domingos; Vanda Sofia Lôa Clemente; Nuno Taveira
Journal:  PLoS One       Date:  2017-07-17       Impact factor: 3.240

2.  Divergent HIV-1 strains (CRF92_C2U and CRF93_cpx) co-circulating in the Democratic Republic of the Congo: Phylogenetic insights on the early evolutionary history of subtype C.

Authors:  C J Villabona Arenas; N Vidal; S Ahuka Mundeke; J Muwonga; L Serrano; J J Muyembe; F Boillot; E Delaporte; M Peeters
Journal:  Virus Evol       Date:  2017-11-10

3.  Current and historic HIV-1 molecular epidemiology in paediatric and adult population from Kinshasa in the Democratic Republic of Congo.

Authors:  Marina Rubio-Garrido; José María González-Alba; Gabriel Reina; Adolphe Ndarabu; David Barquín; Silvia Carlos; Juan Carlos Galán; África Holguín
Journal:  Sci Rep       Date:  2020-10-28       Impact factor: 4.379

4.  Factors Influencing HIV Drug Resistance among Pregnant Women in Luanda, Angola: Findings from a Cross-Sectional Study.

Authors:  Cruz S Sebastião; Joana Morais; Miguel Brito
Journal:  Trop Med Infect Dis       Date:  2021-03-05

5.  Newly Discovered Archival Data Show Coincidence of a Peak of Sexually Transmitted Diseases with the Early Epicenter of Pandemic HIV-1.

Authors:  João Dinis Sousa; Philip J Havik; Viktor Müller; Anne-Mieke Vandamme
Journal:  Viruses       Date:  2021-08-27       Impact factor: 5.048

  5 in total

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