Literature DB >> 27517698

Pcal_1127, a highly stable and efficient ribose-5-phosphate pyrophosphokinase from Pyrobaculum calidifontis.

Tahira Bibi1, Sumera Perveen1, Iram Aziz1, Qamar Bashir1, Naeem Rashid2, Tadayuki Imanaka3, Muhammad Akhtar1,4.   

Abstract

Analysis of the genome sequence of Pyrobaculum calidifontis revealed the presence of an open reading frame Pcal_1127 annotated as ribose-5-phosphate pyrophosphokinase. To examine the properties of Pcal_1127 the coding gene was cloned, expressed in Escherichia coli, and the purified gene product was characterized. Pcal_1127 exhibited higher activity when ATP was replaced by dATP as pyrophosphate donor. Phosphate and EDTA activated the enzyme activity and equivalent amount of activity was detected with ATP and dATP in their presence. Recombinant Pcal_1127 could utilize all the four nucleotides as pyrophosphate donors with a marked preference for ATP. Optimum temperature and pH for the enzyme activity were 55 °C and 10.5, respectively. A unique feature of Pcal_1127 was its stability against temperature as well as denaturants. Pcal_1127 exhibited more than 95 % residual activity after heating for 4 h at 90 °C and a half-life of 15 min in the boiling water. The enzyme activity was not affected by the presence of 8 M urea or 4 M guanidinium chloride. Pcal_1127 was a highly efficient enzyme with a catalytic efficiency of 5183 mM-1 s-1. These features make Pcal_1127, a novel and unique ribose-5-phosphate pyrophosphokinase.

Entities:  

Keywords:  Highly efficient; Hyperthermophile; Most thermostable; Pyrobaculum calidifontis; Ribose-5-phosphate pyrophosphokinase

Mesh:

Substances:

Year:  2016        PMID: 27517698     DOI: 10.1007/s00792-016-0869-z

Source DB:  PubMed          Journal:  Extremophiles        ISSN: 1431-0651            Impact factor:   2.395


  39 in total

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Journal:  J Biol Chem       Date:  2000-11-10       Impact factor: 5.157

3.  Crystal structure of human phosphoribosylpyrophosphate synthetase 1 reveals a novel allosteric site.

Authors:  Sheng Li; Yongcheng Lu; Baozhen Peng; Jianping Ding
Journal:  Biochem J       Date:  2007-01-01       Impact factor: 3.857

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Journal:  J Biol Chem       Date:  1974-01-10       Impact factor: 5.157

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Authors:  B N Krath; T A Eriksen; T S Poulsen; B Hove-Jensen
Journal:  Biochim Biophys Acta       Date:  1999-03-19

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Journal:  J Biochem       Date:  1989-05       Impact factor: 3.387

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Authors:  B N Krath; B Hove-Jensen
Journal:  Protein Sci       Date:  2001-11       Impact factor: 6.725

8.  Purification and Characterization of Phosphoribosylpyrophosphate Synthetase from Rubber Tree Latex.

Authors:  R. Gallois; J. C. Prevot; A. Clement; J. L. Jacob
Journal:  Plant Physiol       Date:  1997-10       Impact factor: 8.340

9.  Mycobacterium tuberculosis phosphoribosylpyrophosphate synthetase: biochemical features of a crucial enzyme for mycobacterial cell wall biosynthesis.

Authors:  Anna P Lucarelli; Silvia Buroni; Maria R Pasca; Menico Rizzi; Andrea Cavagnino; Giovanna Valentini; Giovanna Riccardi; Laurent R Chiarelli
Journal:  PLoS One       Date:  2010-11-15       Impact factor: 3.240

10.  Heterooligomeric phosphoribosyl diphosphate synthase of Saccharomyces cerevisiae: combinatorial expression of the five PRS genes in Escherichia coli.

Authors:  Bjarne Hove-Jensen
Journal:  J Biol Chem       Date:  2004-07-26       Impact factor: 5.157

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  4 in total

1.  Pcal_0632, a phosphorylating glyceraldehyde-3-phosphate dehydrogenase from Pyrobaculum calidifontis.

Authors:  Iram Aziz; Naeem Rashid; Raza Ashraf; Masood Ahmed Siddiqui; Tadayuki Imanaka; Muhammad Akhtar
Journal:  Extremophiles       Date:  2017-11-25       Impact factor: 2.395

Review 2.  Phosphoribosyl Diphosphate (PRPP): Biosynthesis, Enzymology, Utilization, and Metabolic Significance.

Authors:  Bjarne Hove-Jensen; Kasper R Andersen; Mogens Kilstrup; Jan Martinussen; Robert L Switzer; Martin Willemoës
Journal:  Microbiol Mol Biol Rev       Date:  2016-12-28       Impact factor: 11.056

3.  A Phosphofructokinase Homolog from Pyrobaculum calidifontis Displays Kinase Activity towards Pyrimidine Nucleosides and Ribose 1-Phosphate.

Authors:  Iram Aziz; Tahira Bibi; Naeem Rashid; Riku Aono; Haruyuki Atomi; Muhammad Akhtar
Journal:  J Bacteriol       Date:  2018-07-25       Impact factor: 3.490

4.  Anthranilate phosphoribosyltransferase from the hyperthermophilic archaeon Thermococcus kodakarensis shows maximum activity with zinc and forms a unique dimeric structure.

Authors:  Sumera Perveen; Naeem Rashid; Xiao-Feng Tang; Tadayuki Imanaka; Anastassios C Papageorgiou
Journal:  FEBS Open Bio       Date:  2017-07-24       Impact factor: 2.693

  4 in total

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