Literature DB >> 27506205

Structural Effects of Solvation by 18-Crown-6 on Gaseous Peptides and TrpCage after Electrospray Ionization.

James G Bonner1, Nathan G Hendricks1, Ryan R Julian2.   

Abstract

Significant effort is being employed to utilize the inherent speed and sensitivity of mass spectrometry for rapid structural determination of proteins; however, a thorough understanding of factors influencing the transition from solution to gas phase is critical for correct interpretation of the results from such experiments. It was previously shown that combined use of action excitation energy transfer (EET) and simulated annealing can reveal detailed structural information about gaseous peptide ions. Herein, we utilize this method to study microsolvation of charged groups by retention of 18-crown-6 (18C6) in the gas phase. In the case of GTP (CEGNVRVSRE LAGHTGY), solvation of the 2+ charge state leads to reduced EET, whereas the opposite result is obtained for the 3+ ion. For the mini-protein C-Trpcage, solvation by 18C6 leads to dramatic increase in EET for the 3+ ion. Examination of structural details probed by molecular dynamics calculations illustrate that solvation by 18C6 alleviates the tendency of charged side chains to seek intramolecular solvation, potentially preserving native-like structures in the gas phase. These results suggest that microsolvation may be an important tool for facilitating examination of native-like protein structures in gas phase experiments. Graphical Abstract ᅟ.

Entities:  

Keywords:  FRET; Microsolvation; Native MS; Spectroscopy; Structural biology

Mesh:

Substances:

Year:  2016        PMID: 27506205     DOI: 10.1007/s13361-016-1456-3

Source DB:  PubMed          Journal:  J Am Soc Mass Spectrom        ISSN: 1044-0305            Impact factor:   3.109


  36 in total

1.  Electron capture dissociation distinguishes a single D-amino acid in a protein and probes the tertiary structure.

Authors:  Christopher M Adams; Frank Kjeldsen; Roman A Zubarev; Bogdan A Budnik; Kim F Haselmann
Journal:  J Am Soc Mass Spectrom       Date:  2004-07       Impact factor: 3.109

2.  Site-specific radical directed dissociation of peptides at phosphorylated residues.

Authors:  Jolene K Diedrich; Ryan R Julian
Journal:  J Am Chem Soc       Date:  2008-08-19       Impact factor: 15.419

3.  Side chain chemistry mediates backbone fragmentation in hydrogen deficient peptide radicals.

Authors:  Qingyu Sun; Hosea Nelson; Tony Ly; Brian M Stoltz; Ryan R Julian
Journal:  J Proteome Res       Date:  2009-02       Impact factor: 4.466

4.  Radical conversion and migration in electron capture dissociation.

Authors:  Benjamin N Moore; Tony Ly; Ryan R Julian
Journal:  J Am Chem Soc       Date:  2011-04-15       Impact factor: 15.419

Review 5.  Native ion mobility-mass spectrometry and related methods in structural biology.

Authors:  A Konijnenberg; A Butterer; F Sobott
Journal:  Biochim Biophys Acta       Date:  2012-12-14

6.  Action-FRET: probing the molecular conformation of mass-selected gas-phase peptides with Förster resonance energy transfer detected by acceptor-specific fragmentation.

Authors:  Steven Daly; Frédéric Poussigue; Anne-Laure Simon; Luke MacAleese; Franck Bertorelle; Fabien Chirot; Rodolphe Antoine; Philippe Dugourd
Journal:  Anal Chem       Date:  2014-08-19       Impact factor: 6.986

7.  Boundaries of mass resolution in native mass spectrometry.

Authors:  Philip Lössl; Joost Snijder; Albert J R Heck
Journal:  J Am Soc Mass Spectrom       Date:  2014-04-04       Impact factor: 3.109

8.  Factors that influence competitive intermolecular solvation of protonated groups in peptides and proteins in the gas phase.

Authors:  Yuanqi Tao; Ryan R Julian
Journal:  J Am Soc Mass Spectrom       Date:  2013-07-09       Impact factor: 3.109

9.  Collision cross sections for structural proteomics.

Authors:  Erik G Marklund; Matteo T Degiacomi; Carol V Robinson; Andrew J Baldwin; Justin L P Benesch
Journal:  Structure       Date:  2015-03-19       Impact factor: 5.006

10.  Quantifying the stabilizing effects of protein-ligand interactions in the gas phase.

Authors:  Timothy M Allison; Eamonn Reading; Idlir Liko; Andrew J Baldwin; Arthur Laganowsky; Carol V Robinson
Journal:  Nat Commun       Date:  2015-10-06       Impact factor: 14.919

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  1 in total

1.  Synthesis of New S-S and C-C Bonds by Photoinitiated Radical Recombination Reactions in the Gas Phase.

Authors:  Lance E Talbert; Xing Zhang; Nathan Hendricks; Arman Alizadeh; Ryan R Julian
Journal:  Int J Mass Spectrom       Date:  2019-04-05       Impact factor: 1.986

  1 in total

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