Literature DB >> 23246828

Native ion mobility-mass spectrometry and related methods in structural biology.

A Konijnenberg1, A Butterer, F Sobott.   

Abstract

Mass spectrometry-based methods have become increasingly important in structural biology - in particular for large and dynamic, even heterogeneous assemblies of biomolecules. Native electrospray ionization coupled to ion mobility-mass spectrometry provides access to stoichiometry, size and architecture of noncovalent assemblies; while non-native approaches such as covalent labeling and H/D exchange can highlight dynamic details of protein structures and capture intermediate states. In this overview article we will describe these methods and highlight some recent applications for proteins and protein complexes, with particular emphasis on native MS analysis. This article is part of a Special Issue entitled: Mass spectrometry in structural biology.
Copyright © 2012 Elsevier B.V. All rights reserved.

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Year:  2012        PMID: 23246828     DOI: 10.1016/j.bbapap.2012.11.013

Source DB:  PubMed          Journal:  Biochim Biophys Acta        ISSN: 0006-3002


  84 in total

1.  Protein Structural Studies by Traveling Wave Ion Mobility Spectrometry: A Critical Look at Electrospray Sources and Calibration Issues.

Authors:  Yu Sun; Siavash Vahidi; Modupeola A Sowole; Lars Konermann
Journal:  J Am Soc Mass Spectrom       Date:  2015-09-14       Impact factor: 3.109

2.  Addressing a Common Misconception: Ammonium Acetate as Neutral pH "Buffer" for Native Electrospray Mass Spectrometry.

Authors:  Lars Konermann
Journal:  J Am Soc Mass Spectrom       Date:  2017-07-14       Impact factor: 3.109

Review 3.  Probing structures of large protein complexes using zero-length cross-linking.

Authors:  Roland F Rivera-Santiago; Sira Sriswasdi; Sandra L Harper; David W Speicher
Journal:  Methods       Date:  2015-05-01       Impact factor: 3.608

4.  Computational Insights into Compaction of Gas-Phase Protein and Protein Complex Ions in Native Ion Mobility-Mass Spectrometry.

Authors:  Amber D Rolland; James S Prell
Journal:  Trends Analyt Chem       Date:  2019-04-30       Impact factor: 12.296

5.  Top-down mass spectrometry of intact membrane protein complexes reveals oligomeric state and sequence information in a single experiment.

Authors:  Albert Konijnenberg; Ludovic Bannwarth; Duygu Yilmaz; Armağan Koçer; Catherine Venien-Bryan; Frank Sobott
Journal:  Protein Sci       Date:  2015-05-29       Impact factor: 6.725

6.  Extensive Charge Reduction and Dissociation of Intact Protein Complexes Following Electron Transfer on a Quadrupole-Ion Mobility-Time-of-Flight MS.

Authors:  Frederik Lermyte; Jonathan P Williams; Jeffery M Brown; Esther M Martin; Frank Sobott
Journal:  J Am Soc Mass Spectrom       Date:  2015-04-11       Impact factor: 3.109

Review 7.  The emerging role of native mass spectrometry in characterizing the structure and dynamics of macromolecular complexes.

Authors:  Elisabetta Boeri Erba; Carlo Petosa
Journal:  Protein Sci       Date:  2015-03-31       Impact factor: 6.725

8.  Thermodynamic Stability of the Transcription Regulator PaaR2 from Escherichia coli O157:H7.

Authors:  Pieter De Bruyn; San Hadži; Alexandra Vandervelde; Albert Konijnenberg; Maruša Prolič-Kalinšek; Yann G-J Sterckx; Frank Sobott; Jurij Lah; Laurence Van Melderen; Remy Loris
Journal:  Biophys J       Date:  2019-03-28       Impact factor: 4.033

9.  Relative interfacial cleavage energetics of protein complexes revealed by surface collisions.

Authors:  Sophie R Harvey; Justin T Seffernick; Royston S Quintyn; Yang Song; Yue Ju; Jing Yan; Aniruddha N Sahasrabuddhe; Andrew Norris; Mowei Zhou; Edward J Behrman; Steffen Lindert; Vicki H Wysocki
Journal:  Proc Natl Acad Sci U S A       Date:  2019-04-03       Impact factor: 11.205

10.  Molecular Mechanism of ISC Iron-Sulfur Cluster Biogenesis Revealed by High-Resolution Native Mass Spectrometry.

Authors:  Cheng-Wei Lin; Jacob W McCabe; David H Russell; David P Barondeau
Journal:  J Am Chem Soc       Date:  2020-03-17       Impact factor: 15.419

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