Literature DB >> 27499442

The Dynamic Basis for Signal Propagation in Human Pin1-WW.

Simon Olsson1, Dean Strotz2, Beat Vögeli2, Roland Riek2, Andrea Cavalli3.   

Abstract

Allostery is the structural manifestation of information transduction in biomolecules. Its hallmark is conformational change induced by perturbations at a distal site. An increasing body of evidence demonstrates the presence of allostery in very flexible and even disordered proteins, encouraging a thermodynamic description of this phenomenon. Still, resolving such processes at atomic resolution is difficult. Here we establish a protocol to determine atomistic thermodynamic models of such systems using high-resolution solution state nuclear magnetic resonance data and extensive molecular simulations. Using this methodology, we study information transduction in the WW domain of a key cell-cycle regulator Pin1. Pin1 binds promiscuously to phospho-Ser/Thr-Pro motifs, however, disparate structural and dynamic responses have been reported upon binding different ligands. Our model consists of two topologically distinct states whose relative population may be specifically skewed by an incoming ligand. This model provides a canonical basis for the understanding of multi-functionality in Pin1.
Copyright © 2016 Elsevier Ltd. All rights reserved.

Entities:  

Mesh:

Substances:

Year:  2016        PMID: 27499442     DOI: 10.1016/j.str.2016.06.013

Source DB:  PubMed          Journal:  Structure        ISSN: 0969-2126            Impact factor:   5.006


  5 in total

1.  Combining experimental and simulation data of molecular processes via augmented Markov models.

Authors:  Simon Olsson; Hao Wu; Fabian Paul; Cecilia Clementi; Frank Noé
Journal:  Proc Natl Acad Sci U S A       Date:  2017-07-17       Impact factor: 11.205

2.  Protein Allostery at Atomic Resolution.

Authors:  Dean Strotz; Julien Orts; Harindranath Kadavath; Michael Friedmann; Dhiman Ghosh; Simon Olsson; Celestine N Chi; Aditya Pokharna; Peter Güntert; Beat Vögeli; Roland Riek
Journal:  Angew Chem Int Ed Engl       Date:  2020-09-30       Impact factor: 16.823

3.  Fine-tuning the extent and dynamics of binding cleft opening as a potential general regulatory mechanism in parvulin-type peptidyl prolyl isomerases.

Authors:  András Czajlik; Bertalan Kovács; Perttu Permi; Zoltán Gáspári
Journal:  Sci Rep       Date:  2017-03-16       Impact factor: 4.379

4.  Conformational ensembles of RNA oligonucleotides from integrating NMR and molecular simulations.

Authors:  Sandro Bottaro; Giovanni Bussi; Scott D Kennedy; Douglas H Turner; Kresten Lindorff-Larsen
Journal:  Sci Adv       Date:  2018-05-18       Impact factor: 14.136

Review 5.  The Exact Nuclear Overhauser Enhancement: Recent Advances.

Authors:  Parker J Nichols; Alexandra Born; Morkos A Henen; Dean Strotz; Julien Orts; Simon Olsson; Peter Güntert; Celestine N Chi; Beat Vögeli
Journal:  Molecules       Date:  2017-07-14       Impact factor: 4.411

  5 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.