| Literature DB >> 27498015 |
Tina Kapur1, Steve Pieper2, Andriy Fedorov3, J-C Fillion-Robin4, Michael Halle3, Lauren O'Donnell3, Andras Lasso5, Tamas Ungi5, Csaba Pinter5, Julien Finet4, Sonia Pujol3, Jayender Jagadeesan3, Junichi Tokuda3, Isaiah Norton3, Raul San Jose Estepar3, David Gering6, Hugo J W L Aerts3, Marianna Jakab3, Nobuhiko Hata3, Luiz Ibanez7, Daniel Blezek8, Jim Miller9, Stephen Aylward4, W Eric L Grimson10, Gabor Fichtinger5, William M Wells3, William E Lorensen11, Will Schroeder4, Ron Kikinis3.
Abstract
The National Alliance for Medical Image Computing (NA-MIC) was launched in 2004 with the goal of investigating and developing an open source software infrastructure for the extraction of information and knowledge from medical images using computational methods. Several leading research and engineering groups participated in this effort that was funded by the US National Institutes of Health through a variety of infrastructure grants. This effort transformed 3D Slicer from an internal, Boston-based, academic research software application into a professionally maintained, robust, open source platform with an international leadership and developer and user communities. Critical improvements to the widely used underlying open source libraries and tools-VTK, ITK, CMake, CDash, DCMTK-were an additional consequence of this effort. This project has contributed to close to a thousand peer-reviewed publications and a growing portfolio of US and international funded efforts expanding the use of these tools in new medical computing applications every year. In this editorial, we discuss what we believe are gaps in the way medical image computing is pursued today; how a well-executed research platform can enable discovery, innovation and reproducible science ("Open Science"); and how our quest to build such a software platform has evolved into a productive and rewarding social engineering exercise in building an open-access community with a shared vision.Entities:
Keywords: 3D Slicer; Hackathon; Medical image computing; NA-MIC; Open access; Open science; Open source; Project week; Reproducible research
Mesh:
Year: 2016 PMID: 27498015 PMCID: PMC5003088 DOI: 10.1016/j.media.2016.06.035
Source DB: PubMed Journal: Med Image Anal ISSN: 1361-8415 Impact factor: 8.545