Literature DB >> 27495117

Challenges and Opportunities with Non-CYP Enzymes Aldehyde Oxidase, Carboxylesterase, and UDP-Glucuronosyltransferase: Focus on Reaction Phenotyping and Prediction of Human Clearance.

Upendra A Argikar1, Philip M Potter2, J Matthew Hutzler3, Punit H Marathe4.   

Abstract

Over the years, significant progress has been made in reducing metabolic instability due to cytochrome P450-mediated oxidation. High-throughput metabolic stability screening has enabled the advancement of compounds with little to no oxidative metabolism. Furthermore, high lipophilicity and low aqueous solubility of presently pursued chemotypes reduces the probability of renal excretion. As such, these low microsomal turnover compounds are often substrates for non-CYP-mediated metabolism. UGTs, esterases, and aldehyde oxidase are major enzymes involved in catalyzing such metabolism. Hepatocytes provide an excellent tool to identify such pathways including elucidation of major metabolites. To predict human PK parameters for P450-mediated metabolism, in vitro-in vivo extrapolation using hepatic microsomes, hepatocytes, and intestinal microsomes has been actively investigated. However, such methods have not been sufficiently evaluated for non-P450 enzymes. In addition to the involvement of the liver, extrahepatic enzymes (intestine, kidney, lung) are also likely to contribute to these pathways. While there has been considerable progress in predicting metabolic pathways and clearance primarily mediated by the liver, progress in characterizing extrahepatic metabolism and prediction of clearance has been slow. Well-characterized in vitro systems or in vivo animal models to assess drug-drug interaction potential and intersubject variability due to polymorphism are not available. Here we focus on the utility of appropriate in vitro studies to characterize non-CYP-mediated metabolism and to understand the enzymes involved followed by pharmacokinetic studies in the appropriately characterized surrogate species. The review will highlight progress made in establishing in vitro-in vivo correlation, predicting human clearance and avoiding costly clinical failures when non-CYP-mediated metabolic pathways are predominant.

Entities:  

Keywords:  aldehyde oxidase; carboxylesterase; clearance prediction; metabolism; reaction phenotyping; uridine diphosphoglucuronosyl transferase

Mesh:

Substances:

Year:  2016        PMID: 27495117      PMCID: PMC5354079          DOI: 10.1208/s12248-016-9962-6

Source DB:  PubMed          Journal:  AAPS J        ISSN: 1550-7416            Impact factor:   4.009


  121 in total

1.  Characterization of in vitro glucuronidation clearance of a range of drugs in human kidney microsomes: comparison with liver and intestinal glucuronidation and impact of albumin.

Authors:  Katherine L Gill; J Brian Houston; Aleksandra Galetin
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2.  Conformation gating as a mechanism for enzyme specificity.

Authors:  H X Zhou; S T Wlodek; J A McCammon
Journal:  Proc Natl Acad Sci U S A       Date:  1998-08-04       Impact factor: 11.205

3.  Requirements for mammalian carboxylesterase inhibition by substituted ethane-1,2-diones.

Authors:  Elizabeth I Parkinson; M Jason Hatfield; Lyudmila Tsurkan; Janice L Hyatt; Carol C Edwards; Latorya D Hicks; Bing Yan; Philip M Potter
Journal:  Bioorg Med Chem       Date:  2011-07-04       Impact factor: 3.641

Review 4.  Structure and function of mammalian aldehyde oxidases.

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5.  Comparative studies of mammalian acid lipases: Evidence for a new gene family in mouse and rat (Lipo).

Authors:  Roger S Holmes; Laura A Cox; John L VandeBerg
Journal:  Comp Biochem Physiol Part D Genomics Proteomics       Date:  2010-06-11       Impact factor: 2.674

6.  A species difference in the presystemic metabolism of carbazeran in dog and man.

Authors:  B Kaye; J L Offerman; J L Reid; H L Elliott; W S Hillis
Journal:  Xenobiotica       Date:  1984-12       Impact factor: 1.908

7.  Characterization of the expression and activity of carboxylesterases 1 and 2 from the beagle dog, cynomolgus monkey, and human.

Authors:  Eric T Williams; James A Bacon; David M Bender; Jennifer J Lowinger; Wen-Kai Guo; Mariam E Ehsani; Xiliang Wang; He Wang; Yue-Wei Qian; Kenneth J Ruterbories; Steven A Wrighton; Everett J Perkins
Journal:  Drug Metab Dispos       Date:  2011-09-14       Impact factor: 3.922

8.  Carboxylesterase 1 as a determinant of clopidogrel metabolism and activation.

Authors:  Hao-Jie Zhu; Xinwen Wang; Brian E Gawronski; Bryan J Brinda; Dominick J Angiolillo; John S Markowitz
Journal:  J Pharmacol Exp Ther       Date:  2012-12-28       Impact factor: 4.030

9.  Case report of extensive metabolism by aldehyde oxidase in humans: pharmacokinetics and metabolite profile of FK3453 in rats, dogs, and humans.

Authors:  Takafumi Akabane; Kohichiro Tanaka; Megumi Irie; Shigeyuki Terashita; Toshio Teramura
Journal:  Xenobiotica       Date:  2011-03-09       Impact factor: 1.908

10.  Two CES1 gene mutations lead to dysfunctional carboxylesterase 1 activity in man: clinical significance and molecular basis.

Authors:  Hao-Jie Zhu; Kennerly S Patrick; Hong-Jie Yuan; Jun-Sheng Wang; Jennifer L Donovan; C Lindsay DeVane; Robert Malcolm; Julie A Johnson; Geri L Youngblood; Douglas H Sweet; Taimour Y Langaee; John S Markowitz
Journal:  Am J Hum Genet       Date:  2008-05-15       Impact factor: 11.025

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  18 in total

1.  Mechanistic Assessment of Extrahepatic Contributions to Glucuronidation of Integrase Strand Transfer Inhibitors.

Authors:  Stephanie N Liu; Jessica Bo Li Lu; Christy J W Watson; Philip Lazarus; Zeruesenay Desta; Brandon T Gufford
Journal:  Drug Metab Dispos       Date:  2019-02-25       Impact factor: 3.922

2.  Enzyme Kinetics of Uridine Diphosphate Glucuronosyltransferases (UGTs).

Authors:  Jin Zhou; Upendra A Argikar; John O Miners
Journal:  Methods Mol Biol       Date:  2021

3.  Human Liver Microsomes Immobilized on Magnetizable Beads: A Novel Approach to Study In Vitro Drug Metabolism.

Authors:  Alexander M Horspool; Ting Wang; Young-Sun Scaringella; Mitchell E Taub; Tom S Chan
Journal:  Drug Metab Dispos       Date:  2020-05-30       Impact factor: 3.922

4.  Metabolic Profiling of Human Long-Term Liver Models and Hepatic Clearance Predictions from In Vitro Data Using Nonlinear Mixed-Effects Modeling.

Authors:  Nicole A Kratochwil; Christophe Meille; Stephen Fowler; Florian Klammers; Aynur Ekiciler; Birgit Molitor; Sandrine Simon; Isabelle Walter; Claudia McGinnis; Johanna Walther; Brian Leonard; Miriam Triyatni; Hassan Javanbakht; Christoph Funk; Franz Schuler; Thierry Lavé; Neil J Parrott
Journal:  AAPS J       Date:  2017-01-03       Impact factor: 4.009

Review 5.  Physiologically Based Pharmacokinetic Modelling for First-In-Human Predictions: An Updated Model Building Strategy Illustrated with Challenging Industry Case Studies.

Authors:  Neil A Miller; Micaela B Reddy; Aki T Heikkinen; Viera Lukacova; Neil Parrott
Journal:  Clin Pharmacokinet       Date:  2019-06       Impact factor: 6.447

6.  When Cofactors Aren't X Factors: Functional Groups That Are Labile in Human Liver Microsomes in the Absence of NADPH.

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Journal:  ACS Med Chem Lett       Date:  2022-03-11       Impact factor: 4.632

7.  Enzyme Kinetics, Pharmacokinetics, and Inhibition of Aldehyde Oxidase.

Authors:  Erickson M Paragas; Kanika Choughule; Jeffrey P Jones; John T Barr
Journal:  Methods Mol Biol       Date:  2021

8.  Targeted LC-MS/MS Proteomics-Based Strategy To Characterize in Vitro Models Used in Drug Metabolism and Transport Studies.

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Journal:  Anal Chem       Date:  2018-09-28       Impact factor: 6.986

Review 9.  Mechanism of idiosyncratic drug induced liver injury (DILI): unresolved basic issues.

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10.  Application of Physiologically Based Absorption Modeling to Characterize the Pharmacokinetic Profiles of Oral Extended Release Methylphenidate Products in Adults.

Authors:  Xiaoxia Yang; John Duan; Jeffrey Fisher
Journal:  PLoS One       Date:  2016-10-10       Impact factor: 3.240

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