| Literature DB >> 27487927 |
Yuzo Watanabe1, Hisaaki Yanai2, Mayumi Kanagawa2, Sakiko Suzuki1, Satoko Tamura1, Kiyoshi Okada3, Seiki Baba4, Takashi Kumasaka4, Yoshihiro Agari2, Lirong Chen5, Zheng Qing Fu5, John Chrzas5, Bi Cheng Wang5, Noriko Nakagawa6, Akio Ebihara2, Ryoji Masui6, Seiki Kuramitsu6, Shigeyuki Yokoyama2, Gen Ichi Sampei2, Gota Kawai1.
Abstract
The crystal structures of a subunit of the formylglycinamide ribonucleotide amidotransferase, PurS, from Thermus thermophilus, Sulfolobus tokodaii and Methanocaldococcus jannaschii were determined and their structural characteristics were analyzed. For PurS from T. thermophilus, two structures were determined using two crystals that were grown in different conditions. The four structures in the dimeric form were almost identical to one another despite their relatively low sequence identities. This is also true for all PurS structures determined to date. A few residues were conserved among PurSs and these are located at the interaction site with PurL and PurQ, the other subunits of the formylglycinamide ribonucleotide amidotransferase. Molecular-dynamics simulations of the PurS dimer as well as a model of the complex of the PurS dimer, PurL and PurQ suggest that PurS plays some role in the catalysis of the enzyme by its bending motion.Entities:
Keywords: Methanocaldococcus jannaschii; PurS; Sulfolobus tokodaii; Thermus thermophilus; crystal structure; formylglycinamide ribonucleotide amidotransferase; purine nucleotide-biosynthetic pathway
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Year: 2016 PMID: 27487927 PMCID: PMC4973304 DOI: 10.1107/S2053230X1600978X
Source DB: PubMed Journal: Acta Crystallogr F Struct Biol Commun ISSN: 2053-230X Impact factor: 1.056