Literature DB >> 2748595

Cloning and sequencing of cDNA encoding baboon liver alcohol dehydrogenase: evidence for a common ancestral lineage with the human alcohol dehydrogenase beta subunit and for class I ADH gene duplications predating primate radiation.

A E Trezise1, E A Godfrey, R S Holmes, I R Beacham.   

Abstract

The baboon has at least five alcohol dehydrogenases (ADH; alcohol:NAD+ oxidoreductase, EC 1.1.1.1) and has distinct liver and kidney class I isozymes. A rat liver class I ADH partial cDNA was used to screen a baboon liver cDNA library. A cDNA clone was isolated and sequenced and found to contain the entire coding region for baboon liver ADH, 12 nucleotides of the 5' noncoding region, and 256 nucleotides of the 3' noncoding region. The amino acid sequence deduced from this cDNA most closely resembles that of human liver ADH beta subunit (ADH-beta): 363 of 374 residues were identical. This suggested that baboon liver class I ADH is of the same ancestral lineage as the human ADH-beta. In contrast to human liver, only a single ADH-beta transcript is observed in baboon liver. A comparison of human and baboon ADH 3' noncoding regions suggests that a single nucleotide change in a polyadenylylation signal consensus sequence may, in part, be responsible for the generation of ADH-beta transcripts with variable-length 3' ends in human liver. A nucleotide substitution rate of 0.5 x 10(-9) substitutions per site per year for primate class I ADH genes was deduced from the data, which suggests that the alpha-beta gamma separation of human ADH genes occurred about 60 million years ago, and that primate class I ADH gene duplications predated primate radiation.

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Year:  1989        PMID: 2748595      PMCID: PMC297641          DOI: 10.1073/pnas.86.14.5454

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  40 in total

1.  cDNA clones coding for the beta-subunit of human liver alcohol dehydrogenase have differently sized 3'-non-coding regions.

Authors:  L O Hedén; J O Höög; K Larsson; M Lake; E Lagerholm; A Holmgren; B L Vallee; H Jörnvall; H von Bahr-Lindström
Journal:  FEBS Lett       Date:  1986-01-06       Impact factor: 4.124

2.  Structural relationships among class I isozymes of human liver alcohol dehydrogenase.

Authors:  J Hempel; B Holmquist; L Fleetwood; R Kaiser; J Barros-Söderling; R Bühler; B L Vallee; H Jörnvall
Journal:  Biochemistry       Date:  1985-09-24       Impact factor: 3.162

3.  The gamma 1 and gamma 2 subunits of human liver alcohol dehydrogenase. cDNA structures, two amino acid replacements, and compatibility with changes in the enzymatic properties.

Authors:  J O Höög; L O Hedén; K Larsson; H Jörnvall; H von Bahr-Lindström
Journal:  Eur J Biochem       Date:  1986-09-01

4.  Efficient in vitro synthesis of biologically active RNA and RNA hybridization probes from plasmids containing a bacteriophage SP6 promoter.

Authors:  D A Melton; P A Krieg; M R Rebagliati; T Maniatis; K Zinn; M R Green
Journal:  Nucleic Acids Res       Date:  1984-09-25       Impact factor: 16.971

5.  Molecular cloning of a full-length cDNA for human alcohol dehydrogenase.

Authors:  T Ikuta; T Fujiyoshi; K Kurachi; A Yoshida
Journal:  Proc Natl Acad Sci U S A       Date:  1985-05       Impact factor: 11.205

6.  cDNA and protein structure for the alpha subunit of human liver alcohol dehydrogenase.

Authors:  H von Bahr-Lindström; J O Höög; L O Hedén; R Kaiser; L Fleetwood; K Larsson; M Lake; B Holmquist; A Holmgren; J Hempel
Journal:  Biochemistry       Date:  1986-05-06       Impact factor: 3.162

7.  Primate eta-globin DNA sequences and man's place among the great apes.

Authors:  B F Koop; M Goodman; P Xu; K Chan; J L Slightom
Journal:  Nature       Date:  1986 Jan 16-22       Impact factor: 49.962

8.  Three human alcohol dehydrogenase subunits: cDNA structure and molecular and evolutionary divergence.

Authors:  T Ikuta; S Szeto; A Yoshida
Journal:  Proc Natl Acad Sci U S A       Date:  1986-02       Impact factor: 11.205

9.  Cloning and sequencing of cDNA encoding the complete mouse liver alcohol dehydrogenase.

Authors:  H J Edenberg; K Zhang; K Fong; W F Bosron; T K Li
Journal:  Proc Natl Acad Sci U S A       Date:  1985-04       Impact factor: 11.205

10.  Human liver alcohol dehydrogenase. 1. The primary structure of the beta 1 beta 1 isoenzyme.

Authors:  J Hempel; R Bühler; R Kaiser; B Holmquist; C de Zalenski; J P von Wartburg; B Vallee; H Jörnvall
Journal:  Eur J Biochem       Date:  1984-12-17
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  7 in total

1.  Progressive sequence alignment and molecular evolution of the Zn-containing alcohol dehydrogenase family.

Authors:  H W Sun; B V Plapp
Journal:  J Mol Evol       Date:  1992-06       Impact factor: 2.395

2.  Induction of the major integral membrane protein of mouse liver peroxisomes by peroxisome proliferators.

Authors:  N Chen; D I Crane
Journal:  Biochem J       Date:  1992-04-15       Impact factor: 3.857

3.  Amino acid substitution at the Adh locus of Drosophila is facilitated by small population size.

Authors:  T Ohta
Journal:  Proc Natl Acad Sci U S A       Date:  1993-05-15       Impact factor: 11.205

4.  Biochemical genetics of alcohol dehydrogenase isozymes in the gray short-tailed opossum (Monodelphis domestica).

Authors:  R S Holmes; R A van Oorschot; J L VandeBerg
Journal:  Biochem Genet       Date:  1992-06       Impact factor: 1.890

5.  Molecular cloning of the human and monkey sperm surface protein PH-20.

Authors:  Y Lin; L H Kimmel; D G Myles; P Primakoff
Journal:  Proc Natl Acad Sci U S A       Date:  1993-11-01       Impact factor: 11.205

6.  Multiplication of the class I alcohol dehydrogenase locus in mammalian evolution.

Authors:  M Yasunami; C S Chen; A Yoshida
Journal:  Biochem Genet       Date:  1990-12       Impact factor: 1.890

7.  The natural history of class I primate alcohol dehydrogenases includes gene duplication, gene loss, and gene conversion.

Authors:  Matthew A Carrigan; Oleg Uryasev; Ross P Davis; Lanmin Zhai; Thomas D Hurley; Steven A Benner
Journal:  PLoS One       Date:  2012-07-31       Impact factor: 3.240

  7 in total

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