Literature DB >> 27482938

Ligand Displacement Reaction Paths in a Diiron Hydrogenase Active Site Model Complex.

Jan H Blank1, Salvador Moncho1, Allen M Lunsford2, Edward N Brothers1, Marcetta Y Darensbourg3, Ashfaq A Bengali4.   

Abstract

The mechanism and energetics of CO, 1-hexene, and 1-hexyne substitution from the complexes (SBenz)2 [Fe2 (CO)6 ] (SBenz=SCH2 Ph) (1-CO), (SBenz)2 [Fe2 (CO)5 (η(2) -1-hexene)] (1-(η(2) -1-hexene)), and (SBenz)2 [Fe2 (CO)5 (η(2) -1-hexyne)] (1-(η(2) -1-hexyne)) were studied by using time-resolved infrared spectroscopy. Exchange of both CO and 1-hexyne by P(OEt)3 and pyridine, respectively, proceeds by a bimolecular mechanism. As similar activation enthalpies are obtained for both reactions, the rate-determining step in both cases is assumed to be the rotation of the Fe(CO)2 L (L=CO or 1-hexyne) unit to accommodate the incoming ligand. The kinetic profile for the displacement of 1-hexene is quite different than that for the alkyne and, in this case, both reaction channels, that is, dissociative (SN 1) and associative (SN 2), were found to be competitive. Because DFT calculations predict similar binding enthalpies of alkene and alkyne to the iron center, the results indicate that the bimolecular pathway in the case of the alkyne is lower in free energy than that of the alkene. In complexes of this type, subtle changes in the departing ligand characteristics and the nature of the mercapto bridge can influence the exchange mechanism, such that more than one reaction pathway is available for ligand substitution. The difference between this and the analogous study of (μ-pdt)[Fe(CO)3 ]2 (pdt=S(CH2 )3 S) underscores the unique characteristics of a three-atom S-S linker in the active site of diiron hydrogenases.
© 2016 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

Entities:  

Keywords:  density functional calculations; enzyme models; hydrogenases; iron complexes; reaction mechanisms

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Year:  2016        PMID: 27482938     DOI: 10.1002/chem.201601677

Source DB:  PubMed          Journal:  Chemistry        ISSN: 0947-6539            Impact factor:   5.236


  1 in total

1.  CO substitution by PPh3 in Fe2S2(CO)6 proceeds via a novel Fe2S intermediate.

Authors:  Fanjun Zhang; Toby J Woods; Thomas B Rauchfuss; Federica Arrigoni; Giuseppe Zampella
Journal:  Chem Commun (Camb)       Date:  2021-04-23       Impact factor: 6.222

  1 in total

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