Literature DB >> 27480506

A targeted sequencing study of glutamatergic candidate genes in suicide attempters with bipolar disorder.

Sophia C Gaynor1, Marie E Breen1, Eric T Monson1, Kelly de Klerk1, Meredith Parsons1, Adam P DeLuca2, Todd E Scheetz2,3, Peter P Zandi4, James B Potash1, Virginia L Willour1.   

Abstract

Suicidal behavior has been shown to have a heritable component that is partly driven by psychiatric disorders [Brent and Mann, 2005]. However, there is also an independent factor contributing to the heritability of suicidal behavior. We previously conducted a genome-wide association study (GWAS) of bipolar suicide attempters and bipolar non-attempters to assess this independent factor [Willour et al., 2012]. This GWAS implicated glutamatergic neurotransmission in attempted suicide. In the current study, we have conducted a targeted next-generation sequencing study of the glutamatergic N-methyl-D-aspartate (NMDA) receptor, neurexin, and neuroligin gene families in 476 bipolar suicide attempters and 473 bipolar non-attempters. The goal of this study was to gather sequence information from coding and regulatory regions of these glutamatergic genes to identify variants associated with attempted suicide. We identified 186 coding variants and 4,298 regulatory variants predicted to be functional in these genes. No individual variants were overrepresented in cases or controls to a degree that was statistically significant after correction for multiple testing. Additionally, none of the gene-level results were statistically significant following correction. While this study provides no direct support for a role of the examined glutamatergic candidate genes, further sequencing in expanded gene sets and datasets will be required to ultimately determine whether genetic variation in glutamatergic signaling influences suicidal behavior.
© 2016 Wiley Periodicals, Inc. © 2016 Wiley Periodicals, Inc.

Entities:  

Keywords:  GRIN3A; NLGN1; bipolar disorder; candidate gene sequencing; suicidal behavior

Mesh:

Substances:

Year:  2016        PMID: 27480506      PMCID: PMC5814248          DOI: 10.1002/ajmg.b.32479

Source DB:  PubMed          Journal:  Am J Med Genet B Neuropsychiatr Genet        ISSN: 1552-4841            Impact factor:   3.568


  58 in total

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2.  Truncating mutations in NRXN2 and NRXN1 in autism spectrum disorders and schizophrenia.

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Journal:  Hum Genet       Date:  2011-03-22       Impact factor: 4.132

3.  Attempted suicide in bipolar disorder pedigrees: evidence for linkage to 2p12.

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Authors:  Pierre Paoletti
Journal:  Eur J Neurosci       Date:  2011-03-14       Impact factor: 3.386

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Authors:  Adolfo Sequeira; Firoza Mamdani; Carl Ernst; Marquis P Vawter; William E Bunney; Veronique Lebel; Sonia Rehal; Tim Klempan; Alain Gratton; Chawki Benkelfat; Guy A Rouleau; Naguib Mechawar; Gustavo Turecki
Journal:  PLoS One       Date:  2009-08-11       Impact factor: 3.240

7.  Candidate endophenotypes for genetic studies of suicidal behavior.

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Journal:  Biol Psychiatry       Date:  2009-02-07       Impact factor: 13.382

8.  A global reference for human genetic variation.

Authors:  Adam Auton; Lisa D Brooks; Richard M Durbin; Erik P Garrison; Hyun Min Kang; Jan O Korbel; Jonathan L Marchini; Shane McCarthy; Gil A McVean; Gonçalo R Abecasis
Journal:  Nature       Date:  2015-10-01       Impact factor: 49.962

9.  An integrated map of genetic variation from 1,092 human genomes.

Authors:  Goncalo R Abecasis; Adam Auton; Lisa D Brooks; Mark A DePristo; Richard M Durbin; Robert E Handsaker; Hyun Min Kang; Gabor T Marth; Gil A McVean
Journal:  Nature       Date:  2012-11-01       Impact factor: 49.962

10.  Identifying Mendelian disease genes with the variant effect scoring tool.

Authors:  Hannah Carter; Christopher Douville; Peter D Stenson; David N Cooper; Rachel Karchin
Journal:  BMC Genomics       Date:  2013-05-28       Impact factor: 3.969

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  5 in total

Review 1.  Structure, Function, and Pharmacology of Glutamate Receptor Ion Channels.

Authors:  Kasper B Hansen; Lonnie P Wollmuth; Derek Bowie; Hiro Furukawa; Frank S Menniti; Alexander I Sobolevsky; Geoffrey T Swanson; Sharon A Swanger; Ingo H Greger; Terunaga Nakagawa; Chris J McBain; Vasanthi Jayaraman; Chian-Ming Low; Mark L Dell'Acqua; Jeffrey S Diamond; Chad R Camp; Riley E Perszyk; Hongjie Yuan; Stephen F Traynelis
Journal:  Pharmacol Rev       Date:  2021-10       Impact factor: 18.923

Review 2.  Clinical and therapeutic significance of genetic variation in the GRIN gene family encoding NMDARs.

Authors:  Tim A Benke; Kristen Park; Ilona Krey; Chad R Camp; Rui Song; Amy J Ramsey; Hongjie Yuan; Stephen F Traynelis; Johannes Lemke
Journal:  Neuropharmacology       Date:  2021-09-22       Impact factor: 5.250

3.  Targeted Sequencing of FKBP5 in Suicide Attempters with Bipolar Disorder.

Authors:  Marie E Breen; Sophia C Gaynor; Eric T Monson; Kelly de Klerk; Meredith G Parsons; Terry A Braun; Adam P DeLuca; Peter P Zandi; James B Potash; Virginia L Willour
Journal:  PLoS One       Date:  2016-12-28       Impact factor: 3.240

Review 4.  Neurobiological Basis of Increased Risk for Suicidal Behaviour.

Authors:  Aleksandra Wisłowska-Stanek; Karolina Kołosowska; Piotr Maciejak
Journal:  Cells       Date:  2021-09-23       Impact factor: 6.600

5.  Neurexin 1 variants as risk factors for suicide death.

Authors:  Nancy William; Carsten Reissner; Robert Sargent; Todd M Darlington; Emily DiBlasi; Qingqin S Li; Brooks Keeshin; William B Callor; Elliott Ferris; Leslie Jerominski; Ken R Smith; Erik D Christensen; Douglas M Gray; Nicola J Camp; Markus Missler; Megan E Williams; Hilary Coon
Journal:  Mol Psychiatry       Date:  2021-06-25       Impact factor: 15.992

  5 in total

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