Literature DB >> 27470597

Fokker-Planck formalism in magnetic resonance simulations.

Ilya Kuprov1.   

Abstract

This paper presents an overview of the Fokker-Planck formalism for non-biological magnetic resonance simulations, describes its existing applications and proposes some novel ones. The most attractive feature of Fokker-Planck theory compared to the commonly used Liouville - von Neumann equation is that, for all relevant types of spatial dynamics (spinning, diffusion, stationary flow, etc.), the corresponding Fokker-Planck Hamiltonian is time-independent. Many difficult NMR, EPR and MRI simulation problems (multiple rotation NMR, ultrafast NMR, gradient-based zero-quantum filters, diffusion and flow NMR, off-resonance soft microwave pulses in EPR, spin-spin coupling effects in MRI, etc.) are simplified significantly in Fokker-Planck space. The paper also summarises the author's experiences with writing and using the corresponding modules of the Spinach library - the methods described below have enabled a large variety of simulations previously considered too complicated for routine practical use.
Copyright © 2016 The Author(s). Published by Elsevier Inc. All rights reserved.

Entities:  

Keywords:  Magnetic resonance; Simulation; Spin dynamics

Year:  2016        PMID: 27470597     DOI: 10.1016/j.jmr.2016.07.005

Source DB:  PubMed          Journal:  J Magn Reson        ISSN: 1090-7807            Impact factor:   2.229


  8 in total

1.  Microsecond dynamics in proteins by two-dimensional ESR: Predictions.

Authors:  Pranav Gupta; Zhichun Liang; Jack H Freed
Journal:  J Chem Phys       Date:  2020-06-07       Impact factor: 3.488

2.  Microscopic interpretation and generalization of the Bloch-Torrey equation for diffusion magnetic resonance.

Authors:  Inbar Seroussi; Denis S Grebenkov; Ofer Pasternak; Nir Sochen
Journal:  J Magn Reson       Date:  2017-01-27       Impact factor: 2.229

3.  Theory and Least Squares Fitting of CW ESR Saturation Spectra Using the MOMD Model.

Authors:  Pranav Gupta; Boris Dzikovski; Jack H Freed
Journal:  Appl Magn Reson       Date:  2021-07-18       Impact factor: 0.831

4.  Refocusing CSA during magic angle spinning rotating-frame relaxation experiments.

Authors:  Eric G Keeler; Keith J Fritzsching; Ann E McDermott
Journal:  J Magn Reson       Date:  2018-09-14       Impact factor: 2.229

5.  NMR Spin Relaxation Theory of Biomolecules Undergoing Highly Asymmetric Exchange with Large Interaction Partners.

Authors:  Gregory Jameson; Rafael Brüschweiler
Journal:  J Chem Theory Comput       Date:  2021-03-22       Impact factor: 6.006

6.  Microsecond dynamics in proteins by two-dimensional ESR. II. Addressing computational challenges.

Authors:  Pranav Gupta; Kevin Chaudhari; Jack H Freed
Journal:  J Chem Phys       Date:  2021-02-28       Impact factor: 3.488

7.  Deep neural network processing of DEER data.

Authors:  Steven G Worswick; James A Spencer; Gunnar Jeschke; Ilya Kuprov
Journal:  Sci Adv       Date:  2018-08-24       Impact factor: 14.136

8.  Large-scale NMR simulations in liquid state: A tutorial.

Authors:  Ilya Kuprov
Journal:  Magn Reson Chem       Date:  2017-11-27       Impact factor: 2.447

  8 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.