Literature DB >> 27470294

Characterization of circular RNAs landscape in multiple system atrophy brain.

Bei Jun Chen1, James D Mills2, Konii Takenaka1, Nicola Bliim1, Glenda M Halliday3,4, Michael Janitz5.   

Abstract

Circular RNAs (circRNAs) have been recently identified as a naturally occurring family of widespread and diverse endogenous non-coding RNAs that may regulate gene expression in mammals. They are unusually stable RNA molecules with cell type- or developmental stage-specific expression patterns. However, the role of circRNAs in pathology of complex disease is entirely unknown. Here, we report the specific circular transcriptome in the multiple system atrophy (MSA) brain as determined by RNA sequencing. Five circRNAs, namely IQCK, MAP4K3, EFCAB11, DTNA, and MCTP1, were identified and validated as specifically over-expressed in MSA frontal cortex. The expression levels of linear transcripts were not significantly altered and thus did not follow the pattern of their circular counterparts. Further analysis of expression of five MSA-specific circRNAs revealed their over-expression in the white matter of the MSA cortical tissue. Together, this is the first report describing perturbation of circular transcriptome in α-synucleinopathies.
© 2016 International Society for Neurochemistry.

Entities:  

Keywords:  brain transcriptome; circular RNAs; disease markers; grey matter; multiple system atrophy; white matter

Mesh:

Substances:

Year:  2016        PMID: 27470294     DOI: 10.1111/jnc.13752

Source DB:  PubMed          Journal:  J Neurochem        ISSN: 0022-3042            Impact factor:   5.372


  24 in total

Review 1.  Role of circular RNAs in brain development and CNS diseases.

Authors:  Suresh L Mehta; Robert J Dempsey; Raghu Vemuganti
Journal:  Prog Neurobiol       Date:  2020-01-10       Impact factor: 11.685

2.  Circular RNA TLK1 Aggravates Neuronal Injury and Neurological Deficits after Ischemic Stroke via miR-335-3p/TIPARP.

Authors:  Fangfang Wu; Bing Han; Shusheng Wu; Li Yang; Shuo Leng; Mingyue Li; Jiefeng Liao; Guangtian Wang; Qingqing Ye; Yuan Zhang; Haifeng Chen; Xufeng Chen; Ming Zhong; Yun Xu; Qiang Liu; John H Zhang; Honghong Yao
Journal:  J Neurosci       Date:  2019-07-16       Impact factor: 6.167

Review 3.  CircRNA accumulation: A new hallmark of aging?

Authors:  David Knupp; Pedro Miura
Journal:  Mech Ageing Dev       Date:  2018-05-16       Impact factor: 5.432

4.  Association Between Episodic Memory and Genetic Risk Factors for Alzheimer's Disease in South Asians from the Longitudinal Aging Study in India-Diagnostic Assessment of Dementia (LASI-DAD).

Authors:  Jennifer A Smith; Wei Zhao; Miao Yu; Kalee E Rumfelt; Priya Moorjani; Andrea Ganna; Aparajit B Dey; Jinkook Lee; Sharon L R Kardia
Journal:  J Am Geriatr Soc       Date:  2020-08       Impact factor: 5.562

5.  Deficiency in the Ubiquitin Conjugating Enzyme UBE2A in Alzheimer's Disease (AD) is Linked to Deficits in a Natural Circular miRNA-7 Sponge (circRNA; ciRS-7).

Authors:  Yuhai Zhao; Peter N Alexandrov; Vivian Jaber; Walter J Lukiw
Journal:  Genes (Basel)       Date:  2016-12-05       Impact factor: 4.096

6.  circHLA-C Plays an Important Role in Lupus Nephritis by Sponging miR-150.

Authors:  Junjun Luan; Congcong Jiao; Weiwei Kong; Jingqi Fu; Wei Qu; Ying Chen; Xinwang Zhu; Yu Zeng; Guangying Guo; Huimeng Qi; Li Yao; Jingbo Pi; Lining Wang; Hua Zhou
Journal:  Mol Ther Nucleic Acids       Date:  2017-12-20       Impact factor: 8.886

Review 7.  Multiple system atrophy: genetic risks and alpha-synuclein mutations.

Authors:  Heather T Whittaker; Yichen Qui; Conceição Bettencourt; Henry Houlden
Journal:  F1000Res       Date:  2017-11-30

8.  Analysis of the circular RNA transcriptome in endometrial cancer.

Authors:  Bei Jun Chen; Frances L Byrne; Konii Takenaka; Susan C Modesitt; Ellen M Olzomer; James D Mills; Rhonda Farrell; Kyle L Hoehn; Michael Janitz
Journal:  Oncotarget       Date:  2017-12-20

Review 9.  Circular RNAs in Sepsis: Biogenesis, Function, and Clinical Significance.

Authors:  Jesús Beltrán-García; Rebeca Osca-Verdegal; Elena Nacher-Sendra; Federico V Pallardó; José Luis García-Giménez
Journal:  Cells       Date:  2020-06-25       Impact factor: 6.600

10.  Non-coding transcriptome in brain aging.

Authors:  Thomas Arendt; Uwe Ueberham; Michael Janitz
Journal:  Aging (Albany NY)       Date:  2017-09-12       Impact factor: 5.682

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