Literature DB >> 27469345

Lipidomics for studying metabolism.

Xianlin Han1.   

Abstract

Many thousands of lipid species exist and their metabolism is interwoven via numerous pathways and networks. These networks can also change in response to cellular environment alterations, such as exercise or development of a disease. Measuring such alterations and understanding the pathways involved is crucial to fully understand cellular metabolism. Such demands have catalysed the emergence of lipidomics, which enables the large-scale study of lipids using the principles of analytical chemistry. Mass spectrometry, largely due to its analytical power and rapid development of new instruments and techniques, has been widely used in lipidomics and greatly accelerated advances in the field. This Review provides an introduction to lipidomics and describes some common, but important, cellular metabolic networks that can aid our understanding of metabolic pathways. Some representative applications of lipidomics for studying lipid metabolism and metabolic diseases are highlighted, as well as future applications for the use of lipidomics in studying metabolic pathways.

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Year:  2016        PMID: 27469345     DOI: 10.1038/nrendo.2016.98

Source DB:  PubMed          Journal:  Nat Rev Endocrinol        ISSN: 1759-5029            Impact factor:   43.330


  148 in total

Review 1.  The interaction of hepatic lipid and glucose metabolism in liver diseases.

Authors:  Lars P Bechmann; Rebekka A Hannivoort; Guido Gerken; Gökhan S Hotamisligil; Michael Trauner; Ali Canbay
Journal:  J Hepatol       Date:  2011-12-13       Impact factor: 25.083

2.  Dynamic simulation of cardiolipin remodeling: greasing the wheels for an interpretative approach to lipidomics.

Authors:  Michael A Kiebish; Rob Bell; Kui Yang; Toan Phan; Zhongdan Zhao; William Ames; Thomas N Seyfried; Richard W Gross; Jeffrey H Chuang; Xianlin Han
Journal:  J Lipid Res       Date:  2010-04-21       Impact factor: 5.922

Review 3.  Hepatic triacylglycerol accumulation and insulin resistance.

Authors:  Cynthia A Nagle; Eric L Klett; Rosalind A Coleman
Journal:  J Lipid Res       Date:  2008-11-06       Impact factor: 5.922

Review 4.  Gluttony, sloth and the metabolic syndrome: a roadmap to lipotoxicity.

Authors:  Roger H Unger; Philipp E Scherer
Journal:  Trends Endocrinol Metab       Date:  2010-03-10       Impact factor: 12.015

Review 5.  Substrate cycling between de novo lipogenesis and lipid oxidation: a thermogenic mechanism against skeletal muscle lipotoxicity and glucolipotoxicity.

Authors:  A G Dulloo; M Gubler; J P Montani; J Seydoux; G Solinas
Journal:  Int J Obes Relat Metab Disord       Date:  2004-12

6.  Simulation of triacylglycerol ion profiles: bioinformatics for interpretation of triacylglycerol biosynthesis.

Authors:  Rowland H Han; Miao Wang; Xiaoling Fang; Xianlin Han
Journal:  J Lipid Res       Date:  2013-01-30       Impact factor: 5.922

Review 7.  On the molecular etiology of decreased arachidonic (20:4n-6), docosapentaenoic (22:5n-6) and docosahexaenoic (22:6n-3) acids in Zellweger syndrome and other peroxisomal disorders.

Authors:  J P Infante; V A Huszagh
Journal:  Mol Cell Biochem       Date:  1997-03       Impact factor: 3.396

8.  Automated lipid identification and quantification by multidimensional mass spectrometry-based shotgun lipidomics.

Authors:  Kui Yang; Hua Cheng; Richard W Gross; Xianlin Han
Journal:  Anal Chem       Date:  2009-06-01       Impact factor: 6.986

9.  Cardiolipin biosynthesis and remodeling enzymes are altered during development of heart failure.

Authors:  Harjot K Saini-Chohan; Michael G Holmes; Adam J Chicco; William A Taylor; Russell L Moore; Sylvia A McCune; Diane L Hickson-Bick; Grant M Hatch; Genevieve C Sparagna
Journal:  J Lipid Res       Date:  2008-11-10       Impact factor: 5.922

10.  Top-down lipidomics reveals ether lipid deficiency in blood plasma of hypertensive patients.

Authors:  Juergen Graessler; Dominik Schwudke; Peter E H Schwarz; Ronny Herzog; Andrej Shevchenko; Stefan R Bornstein
Journal:  PLoS One       Date:  2009-07-15       Impact factor: 3.240

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  120 in total

1.  Analytical challenges of shotgun lipidomics at different resolution of measurements.

Authors:  Jianing Wang; Xianlin Han
Journal:  Trends Analyt Chem       Date:  2019-10-17       Impact factor: 12.296

2.  Distinct Lipidomic Landscapes Associated with Clinical Stages of Urothelial Cancer of the Bladder.

Authors:  Danthasinghe Waduge Badrajee Piyarathna; Thekkelnaycke M Rajendiran; Vasanta Putluri; Venkatrao Vantaku; Tanu Soni; Friedrich-Carl von Rundstedt; Sri Ramya Donepudi; Feng Jin; Suman Maity; Chandrashekar R Ambati; Jianrong Dong; Daniel Gödde; Stephan Roth; Stephan Störkel; Stephan Degener; George Michailidis; Seth P Lerner; Subramaniam Pennathur; Yair Lotan; Cristian Coarfa; Arun Sreekumar; Nagireddy Putluri
Journal:  Eur Urol Focus       Date:  2017-04-20

Review 3.  Form(ul)ation of adipocytes by lipids.

Authors:  Kfir Lapid; Jonathan M Graff
Journal:  Adipocyte       Date:  2017-03-01       Impact factor: 4.534

4.  Absolute quantitative lipidomics reveals lipidome-wide alterations in aging brain.

Authors:  Jia Tu; Yandong Yin; Meimei Xu; Ruohong Wang; Zheng-Jiang Zhu
Journal:  Metabolomics       Date:  2017-11-28       Impact factor: 4.290

5.  Lipidomic profiling reveals distinct differences in plasma lipid composition in healthy, prediabetic, and type 2 diabetic individuals.

Authors:  Huanzi Zhong; Chao Fang; Yanqun Fan; Yan Lu; Bo Wen; Huahui Ren; Guixue Hou; Fangming Yang; Hailiang Xie; Zhuye Jie; Ye Peng; Zhiqiang Ye; Jiegen Wu; Jin Zi; Guoqing Zhao; Jiayu Chen; Xiao Bao; Yihe Hu; Yan Gao; Jun Zhang; Huanming Yang; Jian Wang; Lise Madsen; Karsten Kristiansen; Chuanming Ni; Junhua Li; Siqi Liu
Journal:  Gigascience       Date:  2017-07-01       Impact factor: 6.524

6.  Oxidative environment causes molecular remodeling in embryonic heart-a metabolomic and lipidomic fingerprinting analysis.

Authors:  Shairam Manickaraj; Deepak Thirumalai; Prashanth Manjunath; Viswanathan Sekarbabu; Sivasubramanian Jeganathan; Lakshmikirupa Sundaresan; Rajalakshmi Subramaniyam; Manivannan Jeganathan
Journal:  Environ Sci Pollut Res Int       Date:  2017-09-02       Impact factor: 4.223

Review 7.  Decoding P4-ATPase substrate interactions.

Authors:  Bartholomew P Roland; Todd R Graham
Journal:  Crit Rev Biochem Mol Biol       Date:  2016-10-04       Impact factor: 8.250

Review 8.  Lipidomics: Techniques, Applications, and Outcomes Related to Biomedical Sciences.

Authors:  Kui Yang; Xianlin Han
Journal:  Trends Biochem Sci       Date:  2016-09-20       Impact factor: 13.807

9.  Imaging of Triglycerides in Tissues Using Nanospray Desorption Electrospray Ionization (Nano-DESI) Mass Spectrometry.

Authors:  Daisy Unsihuay; Jiamin Qiu; Sneha Swaroop; Konstantin O Nagornov; Anton N Kozhinov; Yury O Tsybin; Shihuan Kuang; Julia Laskin
Journal:  Int J Mass Spectrom       Date:  2019-11-27       Impact factor: 1.986

10.  Systems Analyses Reveal Physiological Roles and Genetic Regulators of Liver Lipid Species.

Authors:  Pooja Jha; Molly T McDevitt; Rahul Gupta; Pedro M Quiros; Evan G Williams; Karim Gariani; Maroun B Sleiman; Leo Diserens; Adam Jochem; Arne Ulbrich; Joshua J Coon; Johan Auwerx; David J Pagliarini
Journal:  Cell Syst       Date:  2018-06-13       Impact factor: 10.304

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