Literature DB >> 27466190

IFT52 mutations destabilize anterograde complex assembly, disrupt ciliogenesis and result in short rib polydactyly syndrome.

Wenjuan Zhang1, S Paige Taylor2, Lisette Nevarez1, Ralph S Lachman3, Deborah A Nickerson4,5, Michael Bamshad4,5,6,7, Deborah Krakow2,3,8,9, Daniel H Cohn10,3,9,1.   

Abstract

The short-rib polydactyly syndromes (SRPS) encompass a radiographically and genetically heterogeneous group of skeletal ciliopathies that are characterized by a long narrow chest, short extremities, and variable occurrence of polydactyly. Radiographic abnormalities include undermineralization of the calvarium, shortened and bowed appendicular bones, trident shaped acetabula and polydactyly. In a case of SRPS we identified compound heterozygosity for mutations in IFT52, which encodes a component of the anterograde intraflagellar transport complex. The IFT52 mutant cells synthesized a significantly reduced amount of IFT52 protein, leading to reduced synthesis of IFT74, IFT81, IFT88 and ARL13B, other key anterograde complex members. Ciliogenesis was also disrupted in the mutant cells, with a 60% reduction in the presence of cilia on mutant cells and loss of cilia length regulation for the cells with cilia. These data demonstrate that IFT52 is essential for anterograde complex integrity and for the biosynthesis and maintenance of cilia. The data identify a new locus for SRPS and show that IFT52 mutations result in a ciliopathy with primary effects on the skeleton.
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Year:  2016        PMID: 27466190      PMCID: PMC5291235          DOI: 10.1093/hmg/ddw241

Source DB:  PubMed          Journal:  Hum Mol Genet        ISSN: 0964-6906            Impact factor:   6.150


  41 in total

1.  Ciliary abnormalities due to defects in the retrograde transport protein DYNC2H1 in short-rib polydactyly syndrome.

Authors:  Amy E Merrill; Barry Merriman; Claire Farrington-Rock; Natalia Camacho; Eiman T Sebald; Vincent A Funari; Matthew J Schibler; Marc H Firestein; Zachary A Cohn; Mary Ann Priore; Alicia K Thompson; David L Rimoin; Stanley F Nelson; Daniel H Cohn; Deborah Krakow
Journal:  Am J Hum Genet       Date:  2009-04       Impact factor: 11.025

2.  Ciliopathies with skeletal anomalies and renal insufficiency due to mutations in the IFT-A gene WDR19.

Authors:  Cecilie Bredrup; Sophie Saunier; Machteld M Oud; Torunn Fiskerstrand; Alexander Hoischen; Damien Brackman; Sabine M Leh; Marit Midtbø; Emilie Filhol; Christine Bole-Feysot; Patrick Nitschké; Christian Gilissen; Olav H Haugen; Jan-Stephan F Sanders; Irene Stolte-Dijkstra; Dorus A Mans; Eric J Steenbergen; Ben C J Hamel; Marie Matignon; Rolph Pfundt; Cécile Jeanpierre; Helge Boman; Eyvind Rødahl; Joris A Veltman; Per M Knappskog; Nine V A M Knoers; Ronald Roepman; Heleen H Arts
Journal:  Am J Hum Genet       Date:  2011-10-20       Impact factor: 11.025

3.  A Hidden Markov Model approach to variation among sites in rate of evolution.

Authors:  J Felsenstein; G A Churchill
Journal:  Mol Biol Evol       Date:  1996-01       Impact factor: 16.240

4.  From FastQ data to high confidence variant calls: the Genome Analysis Toolkit best practices pipeline.

Authors:  Geraldine A Van der Auwera; Mauricio O Carneiro; Christopher Hartl; Ryan Poplin; Guillermo Del Angel; Ami Levy-Moonshine; Tadeusz Jordan; Khalid Shakir; David Roazen; Joel Thibault; Eric Banks; Kiran V Garimella; David Altshuler; Stacey Gabriel; Mark A DePristo
Journal:  Curr Protoc Bioinformatics       Date:  2013

5.  Cranioectodermal Dysplasia, Sensenbrenner syndrome, is a ciliopathy caused by mutations in the IFT122 gene.

Authors:  Joanna Walczak-Sztulpa; Jonathan Eggenschwiler; Daniel Osborn; Desmond A Brown; Francesco Emma; Claus Klingenberg; Raoul C Hennekam; Giuliano Torre; Masoud Garshasbi; Andreas Tzschach; Malgorzata Szczepanska; Marian Krawczynski; Jacek Zachwieja; Danuta Zwolinska; Philip L Beales; Hans-Hilger Ropers; Anna Latos-Bielenska; Andreas W Kuss
Journal:  Am J Hum Genet       Date:  2010-05-20       Impact factor: 11.025

Review 6.  Ciliary disorder of the skeleton.

Authors:  Celine Huber; Valerie Cormier-Daire
Journal:  Am J Med Genet C Semin Med Genet       Date:  2012-07-12       Impact factor: 3.908

7.  TTC21B contributes both causal and modifying alleles across the ciliopathy spectrum.

Authors:  Erica E Davis; Qi Zhang; Qin Liu; Bill H Diplas; Lisa M Davey; Jane Hartley; Corinne Stoetzel; Katarzyna Szymanska; Gokul Ramaswami; Clare V Logan; Donna M Muzny; Alice C Young; David A Wheeler; Pedro Cruz; Margaret Morgan; Lora R Lewis; Praveen Cherukuri; Baishali Maskeri; Nancy F Hansen; James C Mullikin; Robert W Blakesley; Gerard G Bouffard; Gabor Gyapay; Susanne Rieger; Burkhard Tönshoff; Ilse Kern; Neveen A Soliman; Thomas J Neuhaus; Kathryn J Swoboda; Hulya Kayserili; Tomas E Gallagher; Richard A Lewis; Carsten Bergmann; Edgar A Otto; Sophie Saunier; Peter J Scambler; Philip L Beales; Joseph G Gleeson; Eamonn R Maher; Tania Attié-Bitach; Hélène Dollfus; Colin A Johnson; Eric D Green; Richard A Gibbs; Friedhelm Hildebrandt; Eric A Pierce; Nicholas Katsanis
Journal:  Nat Genet       Date:  2011-01-23       Impact factor: 38.330

8.  Mutations in DYNC2LI1 disrupt cilia function and cause short rib polydactyly syndrome.

Authors:  S Paige Taylor; Tiago J Dantas; Ivan Duran; Sulin Wu; Ralph S Lachman; Stanley F Nelson; Daniel H Cohn; Richard B Vallee; Deborah Krakow
Journal:  Nat Commun       Date:  2015-06-16       Impact factor: 14.919

9.  Crystal structures of IFT70/52 and IFT52/46 provide insight into intraflagellar transport B core complex assembly.

Authors:  Michael Taschner; Fruzsina Kotsis; Philipp Braeuer; E Wolfgang Kuehn; Esben Lorentzen
Journal:  J Cell Biol       Date:  2014-10-27       Impact factor: 10.539

10.  Dissecting the sequential assembly and localization of intraflagellar transport particle complex B in Chlamydomonas.

Authors:  Elizabeth A Richey; Hongmin Qin
Journal:  PLoS One       Date:  2012-08-10       Impact factor: 3.240

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  12 in total

1.  FAM92A Underlies Nonsyndromic Postaxial Polydactyly in Humans and an Abnormal Limb and Digit Skeletal Phenotype in Mice.

Authors:  Isabelle Schrauwen; Arnaud Pj Giese; Abdul Aziz; David Tino Lafont; Imen Chakchouk; Regie Lyn P Santos-Cortez; Kwanghyuk Lee; Anushree Acharya; Falak Sher Khan; Asmat Ullah; Deborah A Nickerson; Michael J Bamshad; Ghazanfar Ali; Saima Riazuddin; Muhammad Ansar; Wasim Ahmad; Zubair M Ahmed; Suzanne M Leal
Journal:  J Bone Miner Res       Date:  2018-11-05       Impact factor: 6.741

Review 2.  Genes and molecular pathways underpinning ciliopathies.

Authors:  Jeremy F Reiter; Michel R Leroux
Journal:  Nat Rev Mol Cell Biol       Date:  2017-07-12       Impact factor: 94.444

3.  Bi-allelic Mutations in TTC29 Cause Male Subfertility with Asthenoteratospermia in Humans and Mice.

Authors:  Chunyu Liu; Xiaojin He; Wangjie Liu; Shenmin Yang; Lingbo Wang; Weiyu Li; Huan Wu; Shuyan Tang; Xiaoqing Ni; Jiaxiong Wang; Yang Gao; Shixiong Tian; Lin Zhang; Jiangshan Cong; Zhihua Zhang; Qing Tan; Jingjing Zhang; Hong Li; Yading Zhong; Mingrong Lv; Jinsong Li; Li Jin; Yunxia Cao; Feng Zhang
Journal:  Am J Hum Genet       Date:  2019-11-14       Impact factor: 11.025

4.  Expanding the genetic architecture and phenotypic spectrum in the skeletal ciliopathies.

Authors:  Wenjuan Zhang; S Paige Taylor; Hayley A Ennis; Kimberly N Forlenza; Ivan Duran; Bing Li; Jorge A Ortiz Sanchez; Lisette Nevarez; Deborah A Nickerson; Michael Bamshad; Ralph S Lachman; Deborah Krakow; Daniel H Cohn
Journal:  Hum Mutat       Date:  2017-11-06       Impact factor: 4.878

Review 5.  Craniosynostosis as a clinical and diagnostic problem: molecular pathology and genetic counseling.

Authors:  Anna Kutkowska-Kaźmierczak; Monika Gos; Ewa Obersztyn
Journal:  J Appl Genet       Date:  2018-02-01       Impact factor: 3.240

6.  Thm2 interacts with paralog, Thm1, and sensitizes to Hedgehog signaling in postnatal skeletogenesis.

Authors:  Bailey A Allard; Wei Wang; Tana S Pottorf; Hammad Mumtaz; Brittany M Jack; Henry H Wang; Luciane M Silva; Damon T Jacobs; Jinxi Wang; Erin E Bumann; Pamela V Tran
Journal:  Cell Mol Life Sci       Date:  2021-03-08       Impact factor: 9.207

7.  Mutations in IFT-A satellite core component genes IFT43 and IFT121 produce short rib polydactyly syndrome with distinctive campomelia.

Authors:  Ivan Duran; S Paige Taylor; Wenjuan Zhang; Jorge Martin; Faisal Qureshi; Suzanne M Jacques; Robert Wallerstein; Ralph S Lachman; Deborah A Nickerson; Michael Bamshad; Daniel H Cohn; Deborah Krakow
Journal:  Cilia       Date:  2017-04-10

Review 8.  A review of skeletal dysplasia research in India.

Authors:  A Uttarilli; H Shah; A Shukla; K M Girisha
Journal:  J Postgrad Med       Date:  2018 Apr-Jun       Impact factor: 1.476

Review 9.  Intraflagellar Transport Proteins as Regulators of Primary Cilia Length.

Authors:  Wei Wang; Brittany M Jack; Henry H Wang; Matthew A Kavanaugh; Robin L Maser; Pamela V Tran
Journal:  Front Cell Dev Biol       Date:  2021-05-19

10.  Mutations in GRK2 cause Jeune syndrome by impairing Hedgehog and canonical Wnt signaling.

Authors:  Michaela Bosakova; Sara P Abraham; Alexandru Nita; Eva Hruba; Marcela Buchtova; S Paige Taylor; Ivan Duran; Jorge Martin; Katerina Svozilova; Tomas Barta; Miroslav Varecha; Lukas Balek; Jiri Kohoutek; Tomasz Radaszkiewicz; Ganesh V Pusapati; Vitezslav Bryja; Eric T Rush; Isabelle Thiffault; Deborah A Nickerson; Michael J Bamshad; Rajat Rohatgi; Daniel H Cohn; Deborah Krakow; Pavel Krejci
Journal:  EMBO Mol Med       Date:  2020-10-14       Impact factor: 12.137

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