Literature DB >> 29068549

Expanding the genetic architecture and phenotypic spectrum in the skeletal ciliopathies.

Wenjuan Zhang1, S Paige Taylor2, Hayley A Ennis1, Kimberly N Forlenza3, Ivan Duran3,4, Bing Li1, Jorge A Ortiz Sanchez1, Lisette Nevarez1, Deborah A Nickerson5,6, Michael Bamshad5,6,7,8, Ralph S Lachman9, Deborah Krakow2,3,9,10, Daniel H Cohn1,3,9.   

Abstract

Defects in the biosynthesis and/or function of primary cilia cause a spectrum of disorders collectively referred to as ciliopathies. A subset of these disorders is distinguished by profound abnormalities of the skeleton that include a long narrow chest with markedly short ribs, extremely short limbs, and polydactyly. These include the perinatal lethal short-rib polydactyly syndromes (SRPS) and the less severe asphyxiating thoracic dystrophy (ATD), Ellis-van Creveld (EVC) syndrome, and cranioectodermal dysplasia (CED) phenotypes. To identify new genes and define the spectrum of mutations in the skeletal ciliopathies, we analyzed 152 unrelated families with SRPS, ATD, and EVC. Causal variants were discovered in 14 genes in 120 families, including one newly associated gene and two genes previously associated with other ciliopathies. These three genes encode components of three different ciliary complexes; FUZ, which encodes a planar cell polarity complex molecule; TRAF3IP1, which encodes an anterograde ciliary transport protein; and LBR, which encodes a nuclear membrane protein with sterol reductase activity. The results established the molecular basis of SRPS type IV, in which mutations were identified in four different ciliary genes. The data provide systematic insight regarding the genotypes associated with a large cohort of these genetically heterogeneous phenotypes and identified new ciliary components required for normal skeletal development.
© 2017 Wiley Periodicals, Inc.

Entities:  

Keywords:  chondrocyte; cilia; ciliopathy; skeletal dysplasia

Mesh:

Substances:

Year:  2017        PMID: 29068549      PMCID: PMC6198324          DOI: 10.1002/humu.23362

Source DB:  PubMed          Journal:  Hum Mutat        ISSN: 1059-7794            Impact factor:   4.878


  94 in total

1.  NEK1 and DYNC2H1 are both involved in short rib polydactyly Majewski type but not in Beemer Langer cases.

Authors:  Joyce El Hokayem; Céline Huber; Adeline Couvé; Jacqueline Aziza; Geneviève Baujat; Raymonde Bouvier; Denise P Cavalcanti; Felicity A Collins; Marie-Pierre Cordier; Anne-Lise Delezoide; Marie Gonzales; Diana Johnson; Martine Le Merrer; Annie Levy-Mozziconacci; Philippe Loget; Dominique Martin-Coignard; Jelena Martinovic; Geert R Mortier; Marie-José Perez; Joëlle Roume; Gioacchino Scarano; Arnold Munnich; Valérie Cormier-Daire
Journal:  J Med Genet       Date:  2012-04       Impact factor: 6.318

2.  Ciliary abnormalities due to defects in the retrograde transport protein DYNC2H1 in short-rib polydactyly syndrome.

Authors:  Amy E Merrill; Barry Merriman; Claire Farrington-Rock; Natalia Camacho; Eiman T Sebald; Vincent A Funari; Matthew J Schibler; Marc H Firestein; Zachary A Cohn; Mary Ann Priore; Alicia K Thompson; David L Rimoin; Stanley F Nelson; Daniel H Cohn; Deborah Krakow
Journal:  Am J Hum Genet       Date:  2009-04       Impact factor: 11.025

3.  Homozygous variant in C21orf2 in a case of Jeune syndrome with severe thoracic involvement: Extending the phenotypic spectrum.

Authors:  Aideen M McInerney-Leo; Lawrie Wheeler; Mhairi S Marshall; Lisa K Anderson; Andreas Zankl; Matthew A Brown; Paul J Leo; Carol Wicking; Emma L Duncan
Journal:  Am J Med Genet A       Date:  2017-04-19       Impact factor: 2.802

4.  Beemer-Langer syndrome is a ciliopathy due to biallelic mutations in IFT122.

Authors:  Karina C Silveira; Carolina A Moreno; Denise P Cavalcanti
Journal:  Am J Med Genet A       Date:  2017-03-28       Impact factor: 2.802

5.  Role for the IFT-A Complex in Selective Transport to the Primary Cilium.

Authors:  Wenxiang Fu; Lei Wang; Sehyun Kim; Ji Li; Brian David Dynlacht
Journal:  Cell Rep       Date:  2016-11-01       Impact factor: 9.423

6.  Autosomal recessive HEM/Greenberg skeletal dysplasia is caused by 3 beta-hydroxysterol delta 14-reductase deficiency due to mutations in the lamin B receptor gene.

Authors:  Hans R Waterham; Janet Koster; Petra Mooyer; Gerard van Noort Gv; Richard I Kelley; William R Wilcox; Ronald J A Wanders; Raoul C M Hennekam; Jan C Oosterwijk
Journal:  Am J Hum Genet       Date:  2003-02-28       Impact factor: 11.025

7.  The ciliopathy-associated CPLANE proteins direct basal body recruitment of intraflagellar transport machinery.

Authors:  Michinori Toriyama; Chanjae Lee; S Paige Taylor; Ivan Duran; Daniel H Cohn; Ange-Line Bruel; Jacqueline M Tabler; Kevin Drew; Marcus R Kelly; Sukyoung Kim; Tae Joo Park; Daniela A Braun; Ghislaine Pierquin; Armand Biver; Kerstin Wagner; Anne Malfroot; Inusha Panigrahi; Brunella Franco; Hadeel Adel Al-Lami; Yvonne Yeung; Yeon Ja Choi; Yannis Duffourd; Laurence Faivre; Jean-Baptiste Rivière; Jiang Chen; Karen J Liu; Edward M Marcotte; Friedhelm Hildebrandt; Christel Thauvin-Robinet; Deborah Krakow; Peter K Jackson; John B Wallingford
Journal:  Nat Genet       Date:  2016-05-09       Impact factor: 38.330

8.  Mutations in IFT-A satellite core component genes IFT43 and IFT121 produce short rib polydactyly syndrome with distinctive campomelia.

Authors:  Ivan Duran; S Paige Taylor; Wenjuan Zhang; Jorge Martin; Faisal Qureshi; Suzanne M Jacques; Robert Wallerstein; Ralph S Lachman; Deborah A Nickerson; Michael Bamshad; Daniel H Cohn; Deborah Krakow
Journal:  Cilia       Date:  2017-04-10

9.  The PCP effector Fuzzy controls cilial assembly and signaling by recruiting Rab8 and Dishevelled to the primary cilium.

Authors:  Yulia Zilber; Sima Babayeva; Jung Hwa Seo; Jia Jia Liu; Steven Mootin; Elena Torban
Journal:  Mol Biol Cell       Date:  2013-01-09       Impact factor: 4.138

10.  Destabilization of the IFT-B cilia core complex due to mutations in IFT81 causes a Spectrum of Short-Rib Polydactyly Syndrome.

Authors:  Ivan Duran; S Paige Taylor; Wenjuan Zhang; Jorge Martin; Kimberly N Forlenza; Rhonda P Spiro; Deborah A Nickerson; Michael Bamshad; Daniel H Cohn; Deborah Krakow
Journal:  Sci Rep       Date:  2016-09-26       Impact factor: 4.379

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  34 in total

1.  Role for intraflagellar transport in building a functional transition zone.

Authors:  Victor L Jensen; Nils J Lambacher; Chunmei Li; Swetha Mohan; Corey L Williams; Peter N Inglis; Bradley K Yoder; Oliver E Blacque; Michel R Leroux
Journal:  EMBO Rep       Date:  2018-11-14       Impact factor: 8.807

2.  Beyond Panel-Based Testing: Exome Analysis Increases Sensitivity for Diagnosis of Genetic Kidney Disease.

Authors:  Parker C Wilson; Latisha Love-Gregory; Meagan Corliss; Samantha McNulty; Jonathan W Heusel; Joseph P Gaut
Journal:  Kidney360       Date:  2020-05-13

3.  Identification of a novel variant of the ciliopathic gene FUZZY associated with craniosynostosis.

Authors:  William B Barrell; Hadeel Adel Al-Lami; Jacqueline A C Goos; Sigrid M A Swagemakers; Marieke van Dooren; Elena Torban; Peter J van der Spek; Irene M J Mathijssen; Karen J Liu
Journal:  Eur J Hum Genet       Date:  2021-11-01       Impact factor: 4.246

Review 4.  The Joubert-Meckel-Nephronophthisis Spectrum of Ciliopathies.

Authors:  Julie C Van De Weghe; Arianna Gomez; Dan Doherty
Journal:  Annu Rev Genomics Hum Genet       Date:  2022-06-02       Impact factor: 9.340

5.  Novel large deletion involving EVC and EVC2 in Ellis-van Creveld syndrome.

Authors:  Hiroki Sato; Kenichi Suga; Masashi Suzue; Yukako Honma; Yasunobu Hayabuchi; Shunsuke Miyai; Hiroki Kurahashi; Ryuji Nakagawa
Journal:  Hum Genome Var       Date:  2022-05-17

6.  WDR34, a candidate gene for non-syndromic rod-cone dystrophy.

Authors:  Maria Solaguren-Beascoa; Kinga M Bujakowska; Cécile Méjécase; Lisa Emmenegger; Elise Orhan; Marion Neuillé; Saddek Mohand-Saïd; Christel Condroyer; Marie-Elise Lancelot; Christelle Michiels; Vanessa Demontant; Aline Antonio; Mélanie Letexier; Jean-Paul Saraiva; Christine Lonjou; Wassila Carpentier; Thierry Léveillard; Eric A Pierce; Hélène Dollfus; José-Alain Sahel; Shomi S Bhattacharya; Isabelle Audo; Christina Zeitz
Journal:  Clin Genet       Date:  2020-11-09       Impact factor: 4.438

Review 7.  Skeletal ciliopathies: a pattern recognition approach.

Authors:  Atsuhiko Handa; Ulrika Voss; Anna Hammarsjö; Giedre Grigelioniene; Gen Nishimura
Journal:  Jpn J Radiol       Date:  2020-01-21       Impact factor: 2.374

Review 8.  Planar cell polarity pathway in kidney development, function and disease.

Authors:  Elena Torban; Sergei Y Sokol
Journal:  Nat Rev Nephrol       Date:  2021-02-05       Impact factor: 28.314

9.  Chiari 1 malformation and exome sequencing in 51 trios: the emerging role of rare missense variants in chromatin-remodeling genes.

Authors:  Aldesia Provenzano; Andrea La Barbera; Mirko Scagnet; Angelica Pagliazzi; Giovanna Traficante; Marilena Pantaleo; Lucia Tiberi; Debora Vergani; Nehir Edibe Kurtas; Silvia Guarducci; Sara Bargiacchi; Giulia Forzano; Rosangela Artuso; Viviana Palazzo; Ada Kura; Flavio Giordano; Daniele di Feo; Marzia Mortilla; Claudio De Filippi; Gianluca Mattei; Livia Garavelli; Betti Giusti; Lorenzo Genitori; Orsetta Zuffardi; Sabrina Giglio
Journal:  Hum Genet       Date:  2020-12-18       Impact factor: 4.132

10.  A novel heterotaxy gene: Expansion of the phenotype of TTC21B-spectrum disease.

Authors:  Alanna Strong; Dong Li; Frank Mentch; Hakon Hakonarson
Journal:  Am J Med Genet A       Date:  2021-02-05       Impact factor: 2.578

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