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Literature DB >> 27463666

Response to Comment on "A histone acetylation switch regulates H2A.Z deposition by the SWR-C remodeling enzyme".

Abstract

Wang et al report a failure to reproduce our biochemical observation that the INO80C and SWR1C/SWR1/SWR-C chromatin remodeling enzymes catalyze replacement of nucleosomal H2A.Z with H2A when the substrate contains H3-K56Q. They point to technical problems with our dimer exchange assay. In response, we have recapitulated our findings using a mobility shift assay that was developed and employed by Wang and colleagues.

Entities: Chemical Gene Mutation Species

Mesh：

Substances：

Year: 2016 PMID： 27463666 PMCID： PMC8121161 DOI： 10.1126/science.aad6398

Source DB: PubMed Journal: Science ISSN： 0036-8075 Impact factor: 47.728

9 in total

1. Preparation of nucleosome core particle from recombinant histones.

Authors: K Luger; T J Rechsteiner; T J Richmond
Journal: Methods Enzymol Date: 1999 Impact factor: 1.600

Review 2. INO80 and SWR complexes: relating structure to function in chromatin remodeling.

Authors: Christian B Gerhold; Susan M Gasser
Journal: Trends Cell Biol Date: 2014-07-31 Impact factor: 20.808

3. The ATP-dependent remodeler RSC transfers histone dimers and octamers through the rapid formation of an unstable encounter intermediate.

Authors: Claire E Rowe; Geeta J Narlikar
Journal: Biochemistry Date: 2010-10-25 Impact factor: 3.162

4. Global regulation of H2A.Z localization by the INO80 chromatin-remodeling enzyme is essential for genome integrity.

Authors: Manolis Papamichos-Chronakis; Shinya Watanabe; Oliver J Rando; Craig L Peterson
Journal: Cell Date: 2011-01-21 Impact factor: 41.582

5. A histone acetylation switch regulates H2A.Z deposition by the SWR-C remodeling enzyme.

Authors: Shinya Watanabe; Marta Radman-Livaja; Oliver J Rando; Craig L Peterson
Journal: Science Date: 2013-04-12 Impact factor: 47.728

6. Nucleosome-free region dominates histone acetylation in targeting SWR1 to promoters for H2A.Z replacement.

Authors: Anand Ranjan; Gaku Mizuguchi; Peter C FitzGerald; Debbie Wei; Feng Wang; Yingzi Huang; Ed Luk; Christopher L Woodcock; Carl Wu
Journal: Cell Date: 2013-09-12 Impact factor: 41.582

7. The Histone Chaperones FACT and Spt6 Restrict H2A.Z from Intragenic Locations.

Authors: Célia Jeronimo; Shinya Watanabe; Craig D Kaplan; Craig L Peterson; François Robert
Journal: Mol Cell Date: 2015-05-07 Impact factor: 17.970

8. ATP-driven exchange of histone H2AZ variant catalyzed by SWR1 chromatin remodeling complex.

Authors: Gaku Mizuguchi; Xuetong Shen; Joe Landry; Wei-Hua Wu; Subhojit Sen; Carl Wu
Journal: Science Date: 2003-11-26 Impact factor: 47.728

9. Structural analyses of the chromatin remodelling enzymes INO80-C and SWR-C.

Authors: Shinya Watanabe; Dongyan Tan; Mahadevan Lakshminarasimhan; Michael P Washburn; Eun-Jin Erica Hong; Thomas Walz; Craig L Peterson
Journal: Nat Commun Date: 2015-05-12 Impact factor: 14.919

9 in total

6 in total

Response to Comment on "A histone acetylation switch regulates H2A.Z deposition by the SWR-C remodeling enzyme".

1. Preparation of nucleosome core particle from recombinant histones.

Review 2. INO80 and SWR complexes: relating structure to function in chromatin remodeling.

3. The ATP-dependent remodeler RSC transfers histone dimers and octamers through the rapid formation of an unstable encounter intermediate.

4. Global regulation of H2A.Z localization by the INO80 chromatin-remodeling enzyme is essential for genome integrity.

5. A histone acetylation switch regulates H2A.Z deposition by the SWR-C remodeling enzyme.

6. Nucleosome-free region dominates histone acetylation in targeting SWR1 to promoters for H2A.Z replacement.

7. The Histone Chaperones FACT and Spt6 Restrict H2A.Z from Intragenic Locations.

8. ATP-driven exchange of histone H2AZ variant catalyzed by SWR1 chromatin remodeling complex.

9. Structural analyses of the chromatin remodelling enzymes INO80-C and SWR-C.

Review 1. Multicolor single-molecule FRET for DNA and RNA processes.

Review 2. Roles of the INO80 and SWR1 Chromatin Remodeling Complexes in Plants.

Review 3. Interplay among ATP-Dependent Chromatin Remodelers Determines Chromatin Organisation in Yeast.

Review 4. DNA Double Strand Break Repair and Its Control by Nucleosome Remodeling.

5. The chromatin remodeler Ino80 mediates RNAPII pausing site determination.

Review 6. INO80 and SWR1 complexes: the non-identical twins of chromatin remodelling.