| Literature DB >> 27462510 |
Mouhcine Fadil1, Abdellah Farah2, Bouchaib Ihssane2, Taoufik Haloui3, Sara Lebrazi4, Badreddine Zghari5, Saâd Rachiq3.
Abstract
BACKGROUND: To investigate the effect of environmental factors such as light and shade on essential oil yield and morphological traits of Moroccan Myrtus communis, a chemometric study was conducted on 20 individuals growing under two contrasting light environments.Entities:
Keywords: Chemometrics methods; Essential oil yield; Morphological parameters; Shade plants; Sun plants
Year: 2016 PMID: 27462510 PMCID: PMC4942442 DOI: 10.1186/s40064-016-2749-5
Source DB: PubMed Journal: Springerplus ISSN: 2193-1801
Fig. 1Satellite image of Myrtus communis sampling site and its localization in the map of Taza-Taounat-Al Houceima area
Essential oil yield, morphological traits, and altitude recorded for twenty studied individuals
| Sampling site | Individuals | Essential oil yielda (%) | Altitude (m) | Height (cm) | Leaves lengthb (cm) | Leaves widthb (cm) | Leaves thicknessb (µm) |
|---|---|---|---|---|---|---|---|
| Shaded | Ind 1 | 0.48 ± 0.033 | 455 | 175 | 3.6 ± 0.081 | 1.21 ± 0.074 | 189 ± 0.078 |
| Sahded | Ind 2 | 0.48 ± 0.045 | 454 | 178 | 3.74 ± 0.052 | 1.26 ± 0.110 | 192 ± 0.066 |
| Sahded | Ind 3 | 0.76 ± 0.039 | 462 | 156 | 4.1 ± 0.067 | 1.58 ± 0.065 | 195 ± 0.092 |
| Sahded | Ind 4 | 0.93 ± 0.051 | 470 | 146 | 4.5 ± 0.082 | 1.38 ± 0.0.09 | 198 ± 0.053 |
| Sahded | Ind 5 | 0.8 ± 0.011 | 465 | 162 | 3.78 ± 0.063 | 1.5 ± 0.037 | 200 ± 0.058 |
| Sahded | Ind 6 | 0.54 ± 0.063 | 452 | 180 | 3.46 ± 0.045 | 1.1 ± 0.052 | 202 ± 0.039 |
| Sahded | Ind 7 | 0.57 ± 0.022 | 455 | 170 | 4.17 ± 0.056 | 1.42 ± 0.081 | 206 ± 0.052 |
| Sahded | Ind 8 | 0.7 ± 0.041 | 465 | 160 | 3.59 ± 0.091 | 1.14 ± 0.111 | 209 ± 0.064 |
| Sahded | Ind 9 | 0.72 ± 0.017 | 464 | 200 | 4.06 ± 0.064 | 1.22 ± 0.078 | 212 ± 0.073 |
| Sahded | Ind 10 | 0.65 ± 0.009 | 466 | 150 | 3.25 ± 0.049 | 1.01 ± 0.098 | 215 ± 0.059 |
| Exposed | Ind 11 | 1.06 ± 0.035 | 482 | 90 | 4.05 ± 0.10 | 1.08 ± 0.089 | 369 ± 0.081 |
| Exposed | Ind 12 | 0.96 ± 0.055 | 485 | 105 | 3.08 ± 0.054 | 0.91 ± 0.056 | 375 ± 0.084 |
| Exposed | Ind 13 | 0.95 ± 0.024 | 467 | 95 | 3.74 ± 0.074 | 1.06 ± 0.064 | 386 ± 094 |
| Exposed | Ind 14 | 0.99 ± 0.016 | 472 | 67 | 3.28 ± 0.068 | 0.9 ± 0.071 | 392 ± 0.083 |
| Exposed | Ind 15 | 0.96 ± 0.043 | 475 | 92 | 3.31 ± 0.043 | 0.89 ± 0.059 | 395 ± 0.113 |
| Exposed | Ind 16 | 0.88 ± 0.049 | 478 | 100 | 2.81 ± 0.051 | 0.65 ± 0.091 | 398 ± 0.086 |
| Exposed | Ind 17 | 0.88 ± 0.022 | 474 | 85 | 3.13 ± 0.072 | 0.97 ± 0.032 | 401 ± 0.069 |
| Exposed | Ind 18 | 1.02 ± 0.062 | 475 | 130 | 3.35 ± 0.084 | 1.2 ± 0.088 | 404 ± 0.0117 |
| Exposed | Ind 19 | 0.98 ± 0.051 | 482 | 110 | 3.08 ± 0.046 | 0.91 ± 0.061 | 408 ± 0.057 |
| Exposed | Ind 20 | 0.99 ± 0.019 | 480 | 70 | 3.5 ± 0.095 | 1.08 ± 0.048 | 412 ± 0.078 |
aEach value represents the mean of 3 replicates with standard error
bEach value represents the mean of 30 replicates with standard error
Coordinates of parameters on each component, eigenvalues of components, explained variability by each of them and cumulated percentages of explained variability
| Component number | PC1 | PC2 | PC3 | PC4 | PC5 | PC6 |
|---|---|---|---|---|---|---|
| Essential oil yield | −0.835 | 0.519 | 0.084 | 0.020 | 0.074 | 0.144 |
| Altitude | −0.900 | 0.271 | 0.311 | −0.040 | −0.096 | −0.092 |
| Height | 0.920 | −0.167 | 0.308 | −0.021 | 0.173 | −0.004 |
| Leaves length | 0.667 | 0.693 | −0.107 | −0.244 | 0.034 | −0.044 |
| Leaves width | 0.793 | 0.524 | 0.009 | 0.309 | −0.031 | −0.030 |
| Leaves thickness | −0.963 | 0.048 | −0.136 | 0.085 | 0.190 | −0.097 |
| Eigenvalues | 4.33 | 1.13 | 0.24 | 0.16 | 0.09 | 0.05 |
| Percentages of explained variability (%) | 72.22 | 18.87 | 3.93 | 2.68 | 1.51 | 0.8 |
| Cumulated percentages (%) | 72.22 | 91.09 | 95.02 | 97.69 | 99.2 | 100 |
Fig. 2Loading plot which shows that essential oil yield, leaves thickness, and altitude were positively correlated between them and negatively with other morphological traits (plants height, leaves length and width); PC1and PC2 are the first two principal components
Fig. 3Graph of individuals’ distribution (score plot) showing two groups of individuals classified according to the studied parameters. PC1and PC2 are the first two principal components
Fig. 4Bi-plot got by superposing score and loading plots showing the distribution of individuals and parameters. PC1and PC2 are the first two principal components
Fig. 5Hierarchical cluster analysis of Myrtus communis individual’s based on the studied parameters. The between-group method based on the Euclidian distance was used; group A: shade plants, group B: sun plants
Means and standard deviations with the Fcalculated obtained for the one-way ANOVA test carried out on the values of essential oil yield and morphological parameters by considering the sampling site as a factor
| Shades site n = 10 | Exposed site n = 10 | FRatio | |
|---|---|---|---|
| Essential oil yield (%) | 0.66 ± 0.044 | 0.96 ± 0.018 | 37.7* |
| Height (cm) | 167.7 ± 4.76 | 94.4 ± 5.88 | 88.14* |
| Leaves length (cm) | 3.83 ± 0.11 | 3.33 ± 0.11 | 8.93* |
| Leaves width (cm) | 1.28 ± 0.053 | 0.96 ± 0.04 | 17.82* |
| Leaves thickness (µm) | 201.8 ± 2.59 | 394 ± 4.39 | 1378.62* |
* Significant at p < 0.001 probability
Fcalculated, Ftheoretical, p values, coefficients of determination R2 and adjusted coefficient of determination R2a related to the three tested models
| Model with main terms only | Model with main and interaction terms | Model with main, interaction and quadratic terms | |
|---|---|---|---|
| Fcalculated | 15.65*** | 7.26** | 29.42*** |
| Ftheoritical | 3.05 | 3.13 | 4.63 |
|
| 0 | 0.0032 | 0.0007 |
| R2 (%) | 80.67 | 88.97 | 98.8 |
| R2a (%) | 75.51 | 76.72 | 95.44 |
**, ***: Significant at p < 0.01 and p < 0.001 probability, respectively
Fig. 6Curve of observed values as a function of predicted ones obtained for the third tested model containing all of the main terms, the interaction terms, and quadratic terms
Estimated regression coefficients for the model containing main, interaction and quadratic terms
| Coefficients | Coefficient | Estimation | Standard error |
|
|
|---|---|---|---|---|---|
| Constant | b0 | 1.003 | 0.075 | 13.288 | <0.001*** |
| Height | b1 | −0.004 | 0.001 | −5.163 | 0.003** |
| Leaves length | b2 | 0.131 | 0.096 | 1.367 | 0.230 |
| Leaves width | b3 | −0.257 | 0.209 | −1.229 | 0.274 |
| Leaves thickness | b4 | 0.000 | 0.000 | 0.118 | 0.911 |
| Height*Leaves length | b12 | 0.002 | 0.004 | 0.494 | 0.642 |
| Height*Leaves width | b13 | −0.026 | 0.007 | −3.710 | 0.013* |
| Height*Leaves thickness | b14 | 0.000 | 0.000 | 2.542 | 0.052 |
| Leaves length*Leaves width | b23 | −2.688 | 0.952 | −2.824 | 0.036* |
| Leaves length*Leaves thickness | b24 | −0.003 | 0.002 | −1.259 | 0.264 |
| Leaves width*Leaves thickness | b34 | −0.006 | 0.005 | −1.241 | 0.270 |
| Height*Height | b11 | 0.000 | 0.000 | 2.457 | 0.058 |
| Leaves length*Leaves length | b22 | 0.210 | 0.223 | 0.940 | 0.390 |
| Leaves width*Leaves width | b33 | 2.859 | 1.359 | 2.105 | 0.089 |
| Leaves thickness*Leaves thickness | b44 | 0.000 | 0.000 | −0.215 | 0.838 |
*, **, ***: Significant at p < 0.05, p < 0.01 and p < 0.001 probability, respectively