| Literature DB >> 27458544 |
Karen Jones-Mason1, Isabel Elaine Allen2, Nicole Bush3, Steve Hamilton4.
Abstract
BACKGROUND: Epigenetic processes act as a link between environment and individual development. This pilot study examined the association between socioeconomic status (SES), attachment, and methylation of the promoter region of the serotonin transporter gene (SLC6A4).Entities:
Keywords: Attachment; SLC6A4 and 5‐HTTLPR; methylation; socioeconomic status
Mesh:
Substances:
Year: 2016 PMID: 27458544 PMCID: PMC4951620 DOI: 10.1002/brb3.480
Source DB: PubMed Journal: Brain Behav Impact factor: 2.708
Figure 1Targeted regions for methylation data, and mean SLC6A4 methylation. (A) Targeted regions for methylation data. Two amplicons used to cover SLC6A4 in CpG island upstream of exon 1. (B) Mean methylation, with standard deviation, for two SLC6A4 amplicons for 100 participants.
Depression (BDI), anxiety (BAI), ethnicity, sex and methylation and attachment
| A. We note that all analyses contain a variable labeled Asian American versus others. The term “others” refers to all non‐Asian‐American participants. This variable was added because the only differences detected in genotype or in |
| B. Neither anxiety nor depression was related to categorical attachment classification (four way [F, D, E, U] or two way [U vs. F]), |
| C. Continuous UL, trauma and loss or trauma was unrelated to anxiety. UL (w/o trauma) ( |
BAI, Beck Anxiety Inventory; BDI, Beck Depression Inventory; SES, socioeconomic status; UL, unresolved loss; UT, unresolved trauma.
Demographic and descriptive data
| Characteristic | Value (% or SD) |
|---|---|
| Age (years, mean‐SD) | 19.8 (1.6) |
| Female ( | 82 (81.2) |
| Ethnicity | |
| European‐American ( | 34 (33.7) |
| Asian‐American ( | 49 (48.5) |
| Hispanic ( | 12 (11.9) |
| African‐American ( | 2 (2) |
| Other (%) | 4 (4) |
| BDI (mean‐SD) | 6.9 (6.5) |
| Severe ( | 1 (0.9) |
| Moderate ( | 5 (4.95) |
| Mild ( | 10 (9.9) |
| Minimal ( | 85 (84.1) |
| BAI (mean‐SD) | 6.1 (5.7) |
| Severe ( | 2 (1.9) |
| Moderate ( | 4 (3.9) |
| None or mild ( | 95 (94.0) |
| Hollingshead Index (mean‐SD) | 47.9 (15.1) |
| Hollingshead Index groups ( | |
| ≥54 | 44 (43.6) |
| 40–54 | 32 (31.7) |
| 30–39 | 9 (8.9) |
| 20–29 | 9 (8.9) |
| ≤20 | 7 (6.9) |
| ≥30 Mid/High SES | 85 (84.2) |
| <30 Low SES | 16 (15.8) |
| AAI ( | |
| Secure (“F”) | 48 (47.5) |
| Insecure (“D/E”) | 28 (27.7) |
| Unresolved (“U”) | 25 (24.8) |
|
| |
| S/S | 32 (31.7) |
| S/L | 50 (49.5) |
| L/L | 19 (18.8) |
AAI, Adult Attachment Interview; BAI, Beck Anxiety Inventory; BDI, Beck Depression Inventory; SES, socioeconomic status.
Descriptive statistics for variables included in the linear regressions examining the associations of SES, SLC6A4_1pc methylation, and their interaction
| Mean | Std deviation |
| |
|---|---|---|---|
| ULT | 3.29 | 1.8 | 100 |
| UL | 2.97 | 1.8 | 100 |
| UT | 2.3 | 1.8 | 40 |
| UT (whole sample) | 1.5 | 1.28 | 100 |
| SES | 0.000 | 0.36845 | 100 |
| Genotype | 0.000 | 0.70575 | 100 |
| Asian‐Amer. versus Others | 0.500 | 0.5025 | 100 |
| Male versus Female | 0.81 | 0.394 | 100 |
|
| 0.000 | 2.01522 | 100 |
| SES* | −0.104 | 0.81086 | 100 |
| UL (UL w/o trauma) | 3.33333 | 1.842446 | 69 |
| SES | −0.0441 | 0.32250 | 69 |
| Genotype | 0.1010 | 0.72702 | 69 |
| Asian‐Amer. versus Others | 0.391 | 0.4916 | 69 |
| Male versus Female | 0.81 | 0.394 | 69 |
|
| −0.1377 | 2.09057 | 69 |
| SES* | −0.1762 | 0.69666 | 69 |
SES, socioeconomic status; UL, unresolved loss; ULT, unresolved loss and trauma.
Results from the linear regression examining the associations of SES, SLC6A4_1pc methylation, and their interaction with four measures unresolved attachment
|
| Std. er. | β |
| Sig. | CI (95% CI for | ||
|---|---|---|---|---|---|---|---|
| UL | |||||||
| SES | 0.417 | 0.496 | 0.082 | 0.841 | 0.403 | −0.568 | 1.401 |
| Asian‐Amer. versus Others | −0.276 | 0.400 | −0.074 | −0.689 | 0.493 | −1.070 | 0.519 |
| Male versus Female | −0.696 | 0.472 | −0.146 | −1.476 | 0.143 | −1.633 | 0.240 |
| Genotype | 0.200 | 0.277 | 0.075 | 0.721 | 0.473 | −0.351 | 0.751 |
|
| −0.384 | 0.096 | −0.412 | −4.014 | 0.000 | −0.574 | −0.194 |
| SES* | −0.472 | 0.220 | −0.204 | −2.146 | 0.034 | −0.909 | −0.035 |
| Model: | |||||||
| UL w/o Trauma (UT) | |||||||
| SES | −0.839 | 0.958 | −0.147 | −0.876 | 0.384 | −2.755 | 1.076 |
| Asian‐Amer. versus Others | −0.021 | 0.498 | −0.006 | −0.042 | 0.967 | −1.017 | 0.975 |
| Male versus Female | −0.620 | 0.575 | −0.132 | −1.079 | 0.285 | −1.768 | 0.529 |
| Genotype | 0.047 | 0.325 | 0.019 | 0.145 | 0.885 | −0.602 | 0.697 |
|
| −0.434 | 0.123 | −0.492 | −3.540 | 0.001 | −0.679 | −0.189 |
| SES* | −1.031 | 0.427 | −0.390 | −2.417 | 0.019 | −1.884 | −0.178 |
| Model: F6,62 = 3.281, | |||||||
| UT | |||||||
| SES | 1.521 | 0.309 | 0.439 | 4.919 | 0.000 | 0.907 | 2.136 |
| Asian‐Amer. versus Others | 0.140 | 0.250 | 0.055 | 0.560 | 0.577 | −0.356 | 0.636 |
| Male versus Female | −0.428 | 0.294 | −0.132 | −1.453 | 0.150 | −1.012 | 0.157 |
| Genotype | −0.348 | 0.173 | −0.192 | −2.010 | 0.047 | −0.692 | −0.004 |
|
| 0.151 | 0.060 | 0.238 | 2.525 | 0.013 | 0.032 | 0.269 |
| SES* | 0.446 | 0.137 | 0.283 | 3.253 | 0.002 | 0.174 | 0.719 |
| Model: | |||||||
| ULT | |||||||
| SES | 1.297 | 0.520 | 0.256 | 2.491 | 0.015 | 0.263 | 2.330 |
| Asian‐Amer. versus Others | −0.200 | 0.420 | −0.054 | −0.476 | 0.635 | −1.034 | 0.634 |
| Male versus Female | −0.845 | 0.495 | −0.178 | −1.705 | 0.091 | −1.828 | 0.139 |
| Genotype | −0.010 | 0.291 | −0.004 | −0.033 | 0.974 | −0.588 | 0.569 |
|
| −0.222 | 0.100 | −0.239 | −2.207 | 0.030 | −0.421 | −0.022 |
| SES* | −0.029 | 0.231 | −0.012 | −0.125 | 0.901 | −0.487 | 0.430 |
| Model: | |||||||
SES, socioeconomic status; UL, unresolved loss; ULT, unresolved loss and trauma; UT, unresolved trauma.
Correlations between UL, UL (w/o trauma), UT and ULT and SES, sex, ethnicity, genotype, SLC6A4_1pc, methylation and SES*SLC6A4 methylation interaction
| U score | SES | Male versus Female | Ethnic. | Geno. |
| SES* | |
|---|---|---|---|---|---|---|---|
| UL ( | |||||||
| UL | 1.000 | 0.146 | 0.006 | 0.032 | 0.043 | −0.367 | −0.257 |
| SES | 0.146 | 1.000 | 0.142 | 0.109 | −0.191 | −0.142 | −0.239 |
| Male versus Female | 0.006 | 0.142 | 1.000 | −0.025 | −0.090 | −0.326 | −0.053 |
| Ethnicity | 0.032 | 0.109 | −0.025 | 1.000 | −0.441 | −0.283 | 0.101 |
| Genotype | 0.043 | −0.191 | −0.090 | −0.441 | 1.000 | 0.146 | 0.012 |
|
| −0.367 | −0.142 | −0.326 | −0.283 | 0.146 | 1.000 | 0.110 |
| SES* | −0.257 | −0.239 | −0.053 | 0.101 | 0.012 | 0.110 | 1.000 |
| UL (w/o trauma) ( | |||||||
| UL (UL w/o UT) | 1.000 | 0.219 | 0.007 | 0.154 | −0.064 | −0.361 | −0.252 |
| SES | 0.219 | 1.000 | 0.174 | 0.081 | −0.174 | −0.274 | −0.660 |
| Male versus Female | 0.007 | 0.174 | 1.000 | 0.007 | −0.173 | −0.375 | 0.042 |
| Ethnicity | 0.154 | 0.081 | 0.007 | 1.000 | −0.462 | −0.316 | −0.066 |
| Genotype | −0.064 | −0.174 | −0.173 | −0.462 | 1.000 | 0.202 | 0.088 |
|
| −0.361 | −0.274 | −0.375 | −0.316 | 0.202 | 1.000 | −0.091 |
|
| −0.252 | −0.660 | 0.042 | −0.066 | 0.088 | −0.091 | 1.000 |
| UT ( | |||||||
| UT ( | 1.000 | 0.361 | −0.147 | 0.110 | −0.251 | 0.206 | 0.207 |
| SES | 0.361 | 1.000 | 0.142 | 0.109 | −0.191 | −0.142 | −0.239 |
| Male versus Female | −0.147 | 0.142 | 1.000 | −0.025 | −0.090 | −0.326 | −0.053 |
| Ethnicity | 0.110 | 0.109 | −0.025 | 1.000 | −0.441 | −0.283 | −0.049 |
| Genotype | −0.251 | −0.191 | −0.090 | −0.441 | 1.000 | 0.146 | 0.012 |
|
| 0.206 | −0.142 | −0.326 | −0.283 | 0.146 | 1.000 | 0.110 |
|
| 0.207 | −0.239 | −0.053 | −0.049 | 0.012 | 0.110 | 1.000 |
| UL/trauma ( | |||||||
| UL/trauma (UTL) | 1.000 | 0.262 | −0.062 | 0.048 | −0.048 | −0.204 | −0.088 |
| SES | 0.262 | 1.000 | 0.142 | 0.109 | −0.191 | −0.142 | −0.239 |
| Male versus Female | −0.062 | 0.142 | 1.000 | −0.025 | −0.090 | −0.326 | −0.053 |
| Ethnicity | 0.048 | 0.109 | −0.025 | 1.000 | −0.441 | −0.283 | −0.049 |
| Genotype | −0.048 | −0.191 | −0.090 | −0.441 | 1.000 | 0.146 | 0.012 |
|
| −0.204 | −0.142 | −0.326 | −0.283 | 0.146 | 1.000 | 0.110 |
|
| −0.088 | −0.239 | −0.053 | −0.049 | 0.012 | 0.110 | 1.000 |
SES, socioeconomic status; UL, unresolved loss; ULT, unresolved loss and trauma; UT, unresolved trauma.
P < 0.05.
Results from analysis of variance of SLC6A4_2pc methylation with SES, sex, ethnicity and attachment (U vs. F and Org. vs. U) as factors
| Parameter |
| Std. error |
| Sig. | 95% Confidence interval | Partial eta squared | |
|---|---|---|---|---|---|---|---|
| Lower bound | Upper bound | ||||||
|
AAI: Secure versus Unresolved | |||||||
| Mid/High SES (0) versus Low (1) | 1.270 | 0.548 | 2.318 | 0.023 (0.042) | 0.177 | 2.364 | 0.074 |
| Male versus Female | 0.405 | 0.521 | 0.778 | 0.440 (n.s.) | −0.635 | 1.445 | 0.009 |
| Asian‐American versus Others | −0.625 | 0.422 | −1.481 | 0.143 (n.s.) | −1.467 | 0.218 | 0.032 |
| AAI: F versus U | −1.353 | 0.447 | −3.030 | 0.003 (0.010) | −2.245 | −0.462 | 0.120 |
|
AAI: Organized versus Unresolved | |||||||
| Mid/High SES (0) versus Low (1) | 1.361 | 0.511 | 2.665 | 0.009 (0.023) | 0.347 | 2.375 | 0.070 |
| Male versus Female | 0.217 | 0.456 | 0.475 | 0.636 (n.s.) | −0.689 | 1.123 | 0.002 |
| Asian‐Amer. versus Others | −0.295 | 0.356 | −0.830 | 0.409 (n.s.) | −1.001 | 0.411 | 0.007 |
| AAI: Org. versus U | −1.345 | 0.424 | −3.170 | 0.002(0.009) | −2.187 | −0.503 | 0.096 |
AAI, Adult Attachment Interview; SES, socioeconomic status.
Corrected for multiple testing using FDR.
Figure 2Analysis of variance of SLC6A4_2pc methylation with attachment classification (Organized vs. Unresolved) as a factor.
Figure 3Analysis of variance of SLC6A4_2pc methylation with socioeconomic status as a factor among unresolved participants.