| Literature DB >> 27449288 |
Kang Liu1, Xinghan Liu1, Meng Wang1, Xijing Wang1, Huafeng Kang1, Shuai Lin1, Pengtao Yang1, Cong Dai1, Peng Xu1, Shanli Li1, Zhijun Dai1.
Abstract
Recent studies have focused on the associations of catalase polymorphisms with various types of cancer, including cervical and prostate cancers. However, the results were inconsistent. To obtain a more reliable conclusion, we evaluated the relationship between the two common catalase gene polymorphisms (rs1001179 and rs794316) and cancer risk by a meta-analysis. Our meta-analysis included 37 published studies involving 14,942 cancer patients and 43,285 cancer-free controls. Odds ratios (ORs) and 95% confidence intervals (CIs) were used to evaluate the cancer risk. The results demonstrated that the rs1001179 polymorphism was associated with an increased cancer risk in the recessive and homozygote models (TT vs. CC: OR = 1.19, P = 0.01; TT vs. CT+CC: OR = 1.19, P <0.001). Furthermore, stratified analyses revealed a significant association between the rs1001179 polymorphism and prostate cancer in all models except the homozygote comparison. An association of the rs794316 polymorphism with cancer risk was detected in two genetic models (TT vs. AA: OR = 1.34, 95% CI = 1.03-1.74, P <0.001; TT vs. AT+AA: OR = 1.39, 95% CI = 1.09-1.77, P = 0.01). Additional well-designed studies with large samples should be performed to validate our results.Entities:
Keywords: cancer; catalase; meta-analysis; polymorphism; susceptibility
Mesh:
Substances:
Year: 2016 PMID: 27449288 PMCID: PMC5325339 DOI: 10.18632/oncotarget.10617
Source DB: PubMed Journal: Oncotarget ISSN: 1949-2553
Figure 1Flow diagram of included studies for the meta-analysis
CNKI = China National Knowledge Infrastructure.
Characteristics of the studies included in the meta-analysis
| First author | Year | Country | Ethnicity | Genotyping medthod | Source of control | Cancer type | Total sample size (case/control) | HWE | SNP |
|---|---|---|---|---|---|---|---|---|---|
| Sousa | 2016 | Brazil | Mixed | Taqman | hospital | HCC | 106/139 | 0.44 | rs1001179 |
| Castaldo | 2015 | Portugal | Caucasian | PCR | population | CC | 119/106 | rs1001179 | |
| Geybels | 2015 | Netherland | Caucasian | PCR | population | PC | 1529/25184 | rs1001179 | |
| Liu | 2015 | China | Asian | PCR-RFLP | hospital | HCC | 266/248 | 0.68 | rs1001179 |
| Saadat | 2015 | Iran | Caucasian | PCR | population | BC | 407/395 | 0.40 | rs1001179 |
| Su-1 | 2015 | China | Asian | PCR-RFLP | hospital | HCC | 301/186 | 0.49 | rs1001179 |
| Su-2 | 2015 | China | Asian | PCR-RFLP | hospital | HCC | 99/294 | 0.83 | rs1001179 |
| Banescu | 2014 | Romania | Caucasian | PCR-RFLP | population | CML | 168/321 | 0.47 | rs1001179 |
| Aynali | 2013 | Turkey | Caucasian | PCR-RFLP | hospital | Laryngeal cancer | 25/23 | 0.13 | rs1001179 |
| Tefik | 2013 | Turkey | Caucasian | PCR-RFLP | population | PC | 155/195 | 0.07 | rs1001179 |
| Ding | 2012 | China | Asian | PCR | population | PC | 1417/1008 | 0.86 | rs1001179 |
| Farawela | 2012 | Egypt | Caucasian | PCR-RFLP | population | NHL | 100/100 | 0.49 | rs1001179 |
| Karunasinghe | 2012 | New Zealand | Mixed | Taqman | population | PC | 258/567 | 0.42 | rs1001179 |
| Tsai | 2012 | Taiwan | Asian | PCR | hospital | BC | 260/224 | 0.44 | rs1001179 |
| Chang | 2012 | China | Asian | PCR-RFLP | population | CRC | 880/848 | rs794316 | |
| Nahon | 2011 | France | Caucasian | Taqman | hospital | HCC | 84/55 | 0.62 | rs1001179 |
| Ezzikouri | 2010 | France | Mixed | PCR-RFLP | population | HCC | 96/222 | 0.59 | rs1001179 |
| He-1 | 2010 | USA | Caucasian | Taqman | population | BCC | 270/796 | 0.89 | rs1001179 |
| He-2 | 2010 | USA | Caucasian | Taqman | population | Melanoma | 211/796 | 0.89 | rs1001179 |
| He-3 | 2010 | USA | Caucasian | Taqman | population | SCC | 266/796 | 0.89 | rs1001179 |
| Tang | 2010 | USA | Mixed | Taqman | population | Pancreatic cancer | 551/602 | 0.97 | rs1001179 |
| Wu | 2010 | Taiwan | Asian | PCR-RFLP | hospital | OCC | 122/122 | 0.18 | rs794316 |
| Funke | 2009 | Germany | Caucasian | PCR | population | CRC | 632/605 | 0.11 | rs1001179 |
| Li | 2009 | USA | Caucasian | Taqman | population | BC | 497/493 | 1.00 | rs1001179 |
| Quick-1 | 2008 | USA | Caucasian | HM L/I MS | population | BC | 569/974 | 0.70 | rs1001179 |
| Quick-2 | 2008 | USA | Mixed | HM L/I MS | population | BC | 47/108 | 0.22 | rs1001179 |
| Rajaraman-1 | 2008 | USA | Caucasian | Taqman | hospital | Glioma | 330/438 | 0.57 | rs1001179 |
| Rajaraman-2 | 2008 | USA | Caucasian | Taqman | hospital | Meningioma | 120/438 | 0.57 | rs1001179 |
| Rajaraman-3 | 2008 | USA | Caucasian | Taqman | hospital | Acoustic neuroma | 63/438 | 0.57 | rs1001179 |
| Choi-1 | 2007 | USA | Caucasian | HM L/I MS | population | PC | 463/1233 | 0.26 | rs1001179 |
| Choi-2 | 2007 | USA | African | HM L/I MS | population | PC | 27/120 | 0.60 | rs1001179 |
| Cebrian | 2006 | UK | Caucasian | Taqman | population | BC | 2171/2262 | 0.96 | rs1001179 |
| Ho | 2006 | China | Asian | PCR-RFLP | hospital | LC | 230/240 | 0.44 | rs1001179 |
| Lightfoot | 2006 | USA/UK | Mixed | Taqman | population | NHL | 909/1437 | 0.96 | rs1001179 |
| Ahn | 2005 | USA | Caucasian | HM L/I MS | population | BC | 1008/1056 | 0.93 | rs1001179 |
| Lee-1 | 2002 | South Korea | Asian | PCR-RFLP | population | GC | 80/108 | 0.47 | rs794316 |
| Lee-2 | 2002 | South Korea | Asian | PCR-RFLP | population | HCC | 106/108 | 0.47 | rs794316 |
PCR: polymerase chain reaction; RFLP: restriction fragment length polymorphism; HM L/I MS: high-throughput, matrixassisted, laser desorption/ionization time-of-flight mass spectrometry; HCC: hepatocellular carcinoma; CC: cervical cancer; BC: breast cancer; CML: chronic myeloid leukemia; NHL: non-Hodgkin lymphoma; BCC: basal cell carcinoma; SCC: squamous cell carcinoma; PC: Prostate cancer; CRC: colorectal cancer; OCC: Oral cavity cancer; GC: gastric cancer; LC: lung cancer; SNP: single-nucleotide polymorphisms; HWE: Hardy-Weinberg equilibrium.
Genotype Distribution and Allele Frequency of CAT polymorphisms in Cases and Controls
| First author | Genotype (N) | Allele frequency (N) | MAF | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Case | Control | Case | Control | |||||||||||
| total | AA | AB | BB | total | AA | AB | BB | A | B | A | B | |||
| rs1001179 | ||||||||||||||
| Sousa 2016 | 106 | 68 | 35 | 3 | 139 | 103 | 32 | 4 | 171 | 41 | 238 | 40 | 0.19 | |
| Castaldo 2015 | 119 | 58 | 25 | 36 | 106 | 65 | 27 | 14 | 141 | 97 | 157 | 55 | 0.41 | |
| Geybels 2015 | 1529 | 887 | 539 | 103 | 25184 | 15794 | 8108 | 1282 | 2313 | 745 | 39696 | 10672 | 0.24 | |
| Liu 2015 | 266 | 239 | 27 | 0 | 248 | 223 | 24 | 1 | 505 | 27 | 470 | 26 | 0.05 | |
| Saadat 2015 | 407 | 261 | 129 | 17 | 395 | 240 | 132 | 23 | 651 | 163 | 612 | 178 | 0.20 | |
| Su-1 2015 | 301 | 273 | 27 | 1 | 186 | 168 | 18 | 0 | 573 | 29 | 354 | 18 | 0.05 | |
| Su-2 2015 | 99 | 92 | 7 | 0 | 294 | 264 | 29 | 1 | 191 | 7 | 557 | 31 | 0.04 | |
| Banescu 2014 | 168 | 105 | 49 | 14 | 321 | 168 | 132 | 21 | 259 | 77 | 468 | 174 | 0.23 | |
| Aynali 2013 | 25 | 13 | 10 | 2 | 23 | 12 | 11 | 0 | 36 | 14 | 35 | 11 | 0.28 | |
| Tefik 2013 | 155 | 58 | 64 | 33 | 195 | 107 | 68 | 20 | 180 | 130 | 282 | 108 | 0.42 | |
| Ding 2012 | 1417 | 1316 | 99 | 2 | 1008 | 940 | 67 | 1 | 2731 | 103 | 1947 | 69 | 0.04 | |
| Farawela 2012 | 100 | 26 | 49 | 25 | 100 | 28 | 53 | 19 | 101 | 99 | 109 | 91 | 0.50 | |
| Karunasinghe 2012 | 258 | 144 | 99 | 15 | 567 | 350 | 195 | 22 | 387 | 129 | 895 | 239 | 0.25 | |
| Tsai 2012 | 260 | 225 | 35 | 0 | 224 | 202 | 22 | 0 | 485 | 35 | 426 | 22 | 0.07 | |
| Nahon 2011 | 84 | 62 | 21 | 1 | 55 | 32 | 19 | 4 | 145 | 23 | 83 | 27 | 0.14 | |
| Ezzikouri 2010 | 96 | 76 | 14 | 6 | 222 | 173 | 45 | 4 | 166 | 26 | 391 | 53 | 0.14 | |
| He-1 2010 | 270 | 161 | 97 | 12 | 796 | 512 | 252 | 32 | 419 | 121 | 1276 | 316 | 0.22 | |
| He-2 2010 | 211 | 129 | 75 | 7 | 796 | 512 | 252 | 32 | 333 | 89 | 1276 | 316 | 0.21 | |
| He-3 2010 | 266 | 160 | 96 | 10 | 796 | 512 | 252 | 32 | 416 | 116 | 1276 | 316 | 0.22 | |
| Tang 2010 | 551 | 349 | 174 | 28 | 602 | 366 | 207 | 29 | 872 | 230 | 939 | 265 | 0.21 | |
| Funke 2009 | 632 | 374 | 235 | 23 | 605 | 348 | 231 | 26 | 983 | 281 | 927 | 283 | 0.22 | |
| Li 2009 | 497 | 295 | 176 | 26 | 493 | 303 | 167 | 23 | 766 | 228 | 773 | 213 | 0.23 | |
| Quick-1 2008 | 569 | 345 | 197 | 27 | 974 | 598 | 333 | 43 | 887 | 251 | 1529 | 419 | 0.22 | |
| Quick-2 2008 | 47 | 34 | 13 | 0 | 108 | 97 | 10 | 1 | 81 | 13 | 204 | 12 | 0.14 | |
| Rajaraman-1 2008 | 330 | 195 | 124 | 11 | 438 | 251 | 164 | 23 | 514 | 146 | 666 | 210 | 0.22 | |
| Rajaraman-2 2008 | 120 | 73 | 39 | 8 | 438 | 251 | 164 | 23 | 185 | 55 | 666 | 210 | 0.23 | |
| Rajaraman-3 2008 | 63 | 43 | 17 | 3 | 438 | 251 | 164 | 23 | 103 | 23 | 666 | 210 | 0.18 | |
| Choi-1 2007 | 463 | 281 | 157 | 25 | 1233 | 732 | 445 | 56 | 719 | 207 | 1909 | 557 | 0.22 | |
| Choi-2 2007 | 27 | 24 | 3 | 0 | 120 | 109 | 11 | 0 | 51 | 3 | 229 | 11 | 0.06 | |
| Cebrian 2006 | 2171 | 1351 | 707 | 113 | 2262 | 1362 | 787 | 113 | 3409 | 933 | 3511 | 1013 | 0.21 | |
| Ho 2006 | 230 | 209 | 19 | 2 | 240 | 217 | 23 | 0 | 437 | 23 | 457 | 23 | 0.05 | |
| Lightfoot 2006 | 909 | 554 | 298 | 57 | 1437 | 867 | 498 | 72 | 1406 | 412 | 2232 | 642 | 0.23 | |
| Ahn 2005 | 1008 | 614 | 349 | 45 | 1056 | 679 | 335 | 42 | 1577 | 439 | 1693 | 419 | 0.22 | |
| rs794316 | ||||||||||||||
| Chang 2012 | 880 | 280 | 448 | 152 | 848 | 272 | 472 | 104 | 1008 | 752 | 1016 | 680 | 0.43 | |
| Wu 2010 | 122 | 57 | 55 | 10 | 122 | 62 | 54 | 6 | 169 | 75 | 178 | 66 | 0.31 | |
| Lee-1 2002 | 80 | 35 | 38 | 7 | 108 | 51 | 44 | 13 | 108 | 52 | 146 | 70 | 0.33 | |
| Lee-2 2002 | 106 | 51 | 42 | 13 | 108 | 51 | 44 | 13 | 144 | 68 | 146 | 70 | 0.32 | |
A: the major allele; B: the minor allele; MAF: minor allele frequencies.
Meta-analysis of the association between CAT polymorphisms and cancer risk
| Comparisons | OR | 95%CI | Heterogeneity | Effects model | ||
|---|---|---|---|---|---|---|
| I2 | ||||||
| rs1001179 | 1.06 | 0.99-1.13 | 0.11 | 54% | 0.00 | R |
| HWE | 1.04 | 0.97-1.11 | 0.28 | 39% | 0.02 | R |
| Caucasian | 1.05 | 0.96-1.14 | 0.27 | 66% | 0.00 | R |
| Asian | 1.05 | 0.86-1.29 | 0.64 | 0% | 0.80 | F |
| Mixed | 1.10 | 0.92-1.32 | 0.29 | 54% | 0.07 | R |
| PC | 0.02 | 61% | 0.02 | R | ||
| HCC | 0.85 | 0.62-1.17 | 0.32 | 25% | 0.25 | F |
| BC | 1.04 | 0.93-1.17 | 0.50 | 52% | 0.05 | R |
| rs794316 | 1.10 | 0.98-1.24 | 0.11 | 0% | 0.88 | F |
| HWE | 1.06 | 0.84- 1.35 | 0.61 | 0% | 0.76 | F |
| rs1001179 | 0.00 | 20% | 0.16 | F | ||
| HWE | 0.05 | 0% | 0.70 | F | ||
| Caucasian | 1.16 | 0.97-1.38 | 0.10 | 41% | 0.03 | R |
| Asian | 1.37 | 0.37-5.14 | 0.64 | 0% | 0.80 | F |
| Mixed | 1.29 | 0.98-1.68 | 0.07 | 0% | 0.47 | F |
| PC | 0.00 | 33% | 0.20 | F | ||
| HCC | 0.88 | 0.20- 3.82 | 0.87 | 45% | 0.12 | F |
| BC | 1.03 | 0.85- 1.25 | 0.75 | 0% | 0.82 | F |
| rs794316 | 0.00 | 0% | 0.58 | F | ||
| HWE | 1.09 | 0.62-1.91 | 0.76 | 0% | 0.52 | F |
| rs1001179 | 1.02 | 0.94- 1.09 | 0.68 | 39% | 0.01 | R |
| HWE | 1.01 | 0.93- 1.09 | 0.82 | 35% | 0.03 | R |
| Caucasian | 1.01 | 0.93- 1.11 | 0.76 | 47% | 0.01 | R |
| Asian | 1.03 | 0.84- 1.28 | 0.77 | 0% | 0.77 | F |
| Mixed | 1.05 | 0.80- 1.38 | 0.72 | 67% | 0.02 | R |
| PC | 1.14 | 0.99- 1.31 | 0.06 | 33% | 0.19 | F |
| HCC | 0.81 | 0.60- 1.09 | 0.17 | 0% | 0.73 | F |
| BC | 1.07 | 0.91- 1.25 | 0.43 | 60% | 0.02 | R |
| rs794316 | 0.97 | 0.81- 1.16 | 0.74 | 0% | 0.76 | F |
| HWE | 1.10 | 0.79- 1.52 | 0.59 | 0% | 0.81 | F |
| rs1001179 | 1.04 | 0.96- 1.12 | 0.33 | 48% | 0.00 | R |
| HWE | 1.02 | 0.95- 1.11 | 0.54 | 39% | 0.02 | R |
| Caucasian | 1.03 | 0.94- 1.14 | 0.50 | 59% | 0.00 | R |
| Asian | 1.04 | 0.84- 1.29 | 0.70 | 0 % | 0.79 | F |
| Mixed | 1.09 | 0.86- 1.38 | 0.49 | 62% | 0.03 | R |
| PC | 0.04 | 55% | 0.05 | R | ||
| HCC | 0.83 | 0.62- 1.11 | 0.21 | 0% | 0.56 | F |
| BC | 1.06 | 0.91- 1.23 | 0.44 | 59% | 0.02 | R |
| rs794316 | 1.04 | 0.87-1.23 | 0.68 | 0% | 0.92 | F |
| HWE | 1.10 | 0.80- 1.49 | 0.57 | 0% | 0.85 | F |
| rs1001179 | 0.00 | 10% | 0.31 | F | ||
| HWE | 0.05 | 0% | 0.70 | F | ||
| Caucasian | 1.16 | 0.99- 1.35 | 0.06 | 29% | 0.11 | F |
| Asian | 1.38 | 0.37- 5.18 | 0.63 | 0 % | 0.80 | F |
| Mixed | 1.30 | 0.99- 1.70 | 0.05 | 0% | 0.50 | F |
| PC | 0.00 | 0% | 0.48 | F | ||
| HCC | 0.95 | 0.23- 3.99 | 0.94 | 43% | 0.14 | F |
| BC | 1.04 | 0.86- 1.25 | 0.70 | 0% | 0.89 | F |
| rs794316 | 0.01 | 0% | 0.41 | F | ||
| HWE | 1.05 | 0.61- 1.79 | 0.87 | 0% | 0.46 | F |
A: the major allele; B: the minor allele; F: fixed effects mode; R: random effects model; HCC: hepatocellular carcinoma; BC: breast cancer; PC: Prostate cancer; HWE: meta-analysis excluding the studies departing from HWE.
Figure 2Forest plot of cancer risk related to rs1001179 polymorphism under TT versus CC genetic model
T = the minor allele in rs1001179 polymorphism, C = the major allele in rs1001179 polymorphism, CI = confidence interval, OR = odds ratio.
Figure 3Forest plot of cancer risk related to rs794316 polymorphism under TT versus AA genetic model
T = the minor allele in rs794316 polymorphism, A = the major allele in rs794316 polymorphism, CI = confidence interval, OR = odds ratio.
Meta-regression analyses of potential source of heterogeneity
| Heterogeneity factors | Coefficient | SE | Z | 95% CI | ||
|---|---|---|---|---|---|---|
| LL | UL | |||||
| Sample size | 0.047 | 0.042 | 1.12 | 0.273 | −0.039 | 0.134 |
| Publication year | 0.026 | 0.014 | 1.77 | 0.088 | −0.004 | 0.056 |
| Ethnicity | 0.146 | 0.159 | 0.92 | 0.368 | −0.182 | 0.473 |
| Genotype method | −0.023 | 0.054 | −0.42 | 0.676 | −0.135 | 0.089 |
| Source of control | 0.259 | 0.244 | 1.06 | 0.300 | −0.244 | 0.761 |
SE: standard error; 95% CI: 95% confidence interval; LL: lower limit; UL: upper limit.
Figure 4Begg's funnel plot for publication bias test of CAT polymorphisms: rs1001179 (A), rs794316 (B), under the homozygous model
Figure 5Sensitivity analysis of the association between CAT rs1001179 polymorphism and cancer risk under the homozygous model