Literature DB >> 27446659

Efficient positional misalignment correction method for Fourier ptychographic microscopy.

Jiasong Sun1, Qian Chen2, Yuzhen Zhang3, Chao Zuo4.   

Abstract

Fourier ptychographic microscopy (FPM) is a newly developed super-resolution technique, which employs angularly varying illuminations and a phase retrieval algorithm to surpass the diffraction limit of a low numerical aperture (NA) objective lens. In current FPM imaging platforms, accurate knowledge of LED matrix's position is critical to achieve good recovery quality. Furthermore, considering such a wide field-of-view (FOV) in FPM, different regions in the FOV have different sensitivity of LED positional misalignment. In this work, we introduce an iterative method to correct position errors based on the simulated annealing (SA) algorithm. To improve the efficiency of this correcting process, large number of iterations for several images with low illumination NAs are firstly implemented to estimate the initial values of the global positional misalignment model through non-linear regression. Simulation and experimental results are presented to evaluate the performance of the proposed method and it is demonstrated that this method can both improve the quality of the recovered object image and relax the LED elements' position accuracy requirement while aligning the FPM imaging platforms.

Entities:  

Keywords:  (100.0100) Image processing; (100.3010) Image reconstruction techniques; (100.5070) Phase retrieval; (110.0180) Microscopy; (110.1758) Computational imaging

Year:  2016        PMID: 27446659      PMCID: PMC4929645          DOI: 10.1364/BOE.7.001336

Source DB:  PubMed          Journal:  Biomed Opt Express        ISSN: 2156-7085            Impact factor:   3.732


  26 in total

1.  Diversity selection for phase-diverse phase retrieval.

Authors:  Bruce H Dean; Charles W Bowers
Journal:  J Opt Soc Am A Opt Image Sci Vis       Date:  2003-08       Impact factor: 2.129

2.  Coherent aperture-synthesis, wide-field, high-resolution holographic microscopy of biological tissue.

Authors:  Thomas Gutzler; Timothy R Hillman; Sergey A Alexandrov; David D Sampson
Journal:  Opt Lett       Date:  2010-04-15       Impact factor: 3.776

3.  Probe retrieval in ptychographic coherent diffractive imaging.

Authors:  Pierre Thibault; Martin Dierolf; Oliver Bunk; Andreas Menzel; Franz Pfeiffer
Journal:  Ultramicroscopy       Date:  2009-01-04       Impact factor: 2.689

4.  High resolution digital holographic microscopy with a wide field of view based on a synthetic aperture technique and use of linear CCD scanning.

Authors:  Jianglei Di; Jianlin Zhao; Hongzhen Jiang; Peng Zhang; Qi Fan; Weiwei Sun
Journal:  Appl Opt       Date:  2008-10-20       Impact factor: 1.980

5.  Phase retrieval with transverse translation diversity: a nonlinear optimization approach.

Authors:  Manuel Guizar-Sicairos; James R Fienup
Journal:  Opt Express       Date:  2008-05-12       Impact factor: 3.894

6.  Quantitative phase imaging via Fourier ptychographic microscopy.

Authors:  Xiaoze Ou; Roarke Horstmeyer; Changhuei Yang; Guoan Zheng
Journal:  Opt Lett       Date:  2013-11-15       Impact factor: 3.776

7.  Content adaptive illumination for Fourier ptychography.

Authors:  Liheng Bian; Jinli Suo; Guohai Situ; Guoan Zheng; Feng Chen; Qionghai Dai
Journal:  Opt Lett       Date:  2014-12-01       Impact factor: 3.776

8.  Drift correction in ptychographic diffractive imaging.

Authors:  Mike Beckers; Tobias Senkbeil; Thomas Gorniak; Klaus Giewekemeyer; Tim Salditt; Axel Rosenhahn
Journal:  Ultramicroscopy       Date:  2012-11-23       Impact factor: 2.689

9.  Transfer function analysis in epi-illumination Fourier ptychography.

Authors:  Shaun Pacheco; Basel Salahieh; Tom Milster; Jeffrey J Rodriguez; Rongguang Liang
Journal:  Opt Lett       Date:  2015-11-15       Impact factor: 3.776

10.  Wide-field, high-resolution Fourier ptychographic microscopy.

Authors:  Guoan Zheng; Roarke Horstmeyer; Changhuei Yang
Journal:  Nat Photonics       Date:  2013-09-01       Impact factor: 38.771

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  10 in total

1.  Reliable deep-learning-based phase imaging with uncertainty quantification.

Authors:  Yujia Xue; Shiyi Cheng; Yunzhe Li; Lei Tian
Journal:  Optica       Date:  2019-05-07       Impact factor: 11.104

2.  Synthetic aperture interference light (SAIL) microscopy for high-throughput label-free imaging.

Authors:  Chenfei Hu; Mikhail E Kandel; Young Jae Lee; Gabriel Popescu
Journal:  Appl Phys Lett       Date:  2021-12-08       Impact factor: 3.791

3.  Robust Fourier ptychographic microscopy via a physics-based defocusing strategy for calibrating angle-varied LED illumination.

Authors:  Chuanjian Zheng; Shaohui Zhang; Guocheng Zhou; Yao Hu; Qun Hao
Journal:  Biomed Opt Express       Date:  2022-02-22       Impact factor: 3.732

4.  Fourier ptychography multi-parameunter neural network with composite physical priori optimization.

Authors:  Delong Yang; Shaohui Zhang; Chuanjian Zheng; Guocheng Zhou; Lei Cao; Yao Hu; Qun Hao
Journal:  Biomed Opt Express       Date:  2022-04-11       Impact factor: 3.562

5.  Implementation of free-space Fourier Ptychography with near maximum system numerical aperture.

Authors:  Mingshu Liang; Changhuei Yang
Journal:  Opt Express       Date:  2022-06-06       Impact factor: 3.833

6.  Robust full-pose-parameter estimation for the LED array in Fourier ptychographic microscopy.

Authors:  Chuanjian Zheng; Shaohui Zhang; Delong Yang; Guocheng Zhou; Yao Hu; Qun Hao
Journal:  Biomed Opt Express       Date:  2022-08-01       Impact factor: 3.562

7.  Resolution-enhanced Fourier ptychographic microscopy based on high-numerical-aperture illuminations.

Authors:  Jiasong Sun; Chao Zuo; Liang Zhang; Qian Chen
Journal:  Sci Rep       Date:  2017-04-26       Impact factor: 4.379

8.  Neural network model assisted Fourier ptychography with Zernike aberration recovery and total variation constraint.

Authors:  Yongbing Zhang; Yangzhe Liu; Shaowei Jiang; Krishna Dixit; Pengming Song; Xinfeng Zhang; Xiangyang Ji; Xiu Li
Journal:  J Biomed Opt       Date:  2021-03       Impact factor: 3.170

9.  Deep Multi-Feature Transfer Network for Fourier Ptychographic Microscopy Imaging Reconstruction.

Authors:  Xiaoli Wang; Yan Piao; Jinyang Yu; Jie Li; Haixin Sun; Yuanshang Jin; Limin Liu; Tingfa Xu
Journal:  Sensors (Basel)       Date:  2022-02-06       Impact factor: 3.576

10.  High-speed Fourier ptychographic microscopy based on programmable annular illuminations.

Authors:  Jiasong Sun; Chao Zuo; Jialin Zhang; Yao Fan; Qian Chen
Journal:  Sci Rep       Date:  2018-05-16       Impact factor: 4.379

  10 in total

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