Literature DB >> 27445135

Activity-Dependent Palmitoylation Controls SynDIG1 Stability, Localization, and Function.

Inderpreet Kaur1, Vladimir Yarov-Yarovoy2, Lyndsey M Kirk1, Kristopher E Plambeck1, Eden V Barragan1, Eric S Ontiveros1, Elva Díaz3.   

Abstract

UNLABELLED: Synapses are specialized contacts between neurons. Synapse differentiation-induced gene I (SynDIG1) plays a critical role during synapse development to regulate AMPA receptor (AMPAR) and PSD-95 content at excitatory synapses. Palmitoylation regulates the localization and function of many synaptic proteins, including AMPARs and PSD-95. Here we show that SynDIG1 is palmitoylated, and investigate the effects of palmitoylation on SynDIG1 stability and localization. Structural modeling of SynDIG1 suggests that the membrane-associated region forms a three-helical bundle with two cysteine residues located at positions 191 and 192 in the juxta-transmembrane region exposed to the cytoplasm. Site-directed mutagenesis reveals that C191 and C192 are palmitoylated in heterologous cells and positively regulates dendritic targeting in neurons. Like PSD-95, activity blockade in a rat hippocampal slice culture increases SynDIG1 palmitoylation, which is consistent with our prior demonstration that SynDIG1 localization at synapses increases upon activity blockade. These data demonstrate that palmitoylation of SynDIG1 is regulated by neuronal activity, and plays a critical role in regulating its stability and subcellular localization, and thereby its function. SIGNIFICANCE STATEMENT: Palmitoylation is a reversible post-translation modification that has recently been recognized as playing a critical role in the localization and function of many synaptic proteins. Here we show that activity-dependent palmitoylation of the atypical AMPA receptor auxiliary transmembrane protein SynDIG1 regulates its stability and localization at synapses to regulate function and synaptic strength.
Copyright © 2016 the authors 0270-6474/16/367562-07$15.00/0.

Entities:  

Keywords:  PSD-95; SynDIG1; excitatory synapse; palmitoylation

Mesh:

Substances:

Year:  2016        PMID: 27445135      PMCID: PMC4951570          DOI: 10.1523/JNEUROSCI.4859-14.2016

Source DB:  PubMed          Journal:  J Neurosci        ISSN: 0270-6474            Impact factor:   6.167


  26 in total

1.  Cascaded multiple classifiers for secondary structure prediction.

Authors:  M Ouali; R D King
Journal:  Protein Sci       Date:  2000-06       Impact factor: 6.725

2.  Synaptic strength regulated by palmitate cycling on PSD-95.

Authors:  Alaa El-Din El-Husseini; Eric Schnell; Srikanth Dakoji; Neal Sweeney; Qiang Zhou; Oliver Prange; Catherine Gauthier-Campbell; Andrea Aguilera-Moreno; Roger A Nicoll; David S Bredt
Journal:  Cell       Date:  2002-03-22       Impact factor: 41.582

3.  Structure validation by Calpha geometry: phi,psi and Cbeta deviation.

Authors:  Simon C Lovell; Ian W Davis; W Bryan Arendall; Paul I W de Bakker; J Michael Word; Michael G Prisant; Jane S Richardson; David C Richardson
Journal:  Proteins       Date:  2003-02-15

4.  UCSF Chimera--a visualization system for exploratory research and analysis.

Authors:  Eric F Pettersen; Thomas D Goddard; Conrad C Huang; Gregory S Couch; Daniel M Greenblatt; Elaine C Meng; Thomas E Ferrin
Journal:  J Comput Chem       Date:  2004-10       Impact factor: 3.376

5.  Differential regulation of AMPA receptor subunit trafficking by palmitoylation of two distinct sites.

Authors:  Takashi Hayashi; Gavin Rumbaugh; Richard L Huganir
Journal:  Neuron       Date:  2005-09-01       Impact factor: 17.173

6.  Multipass membrane protein structure prediction using Rosetta.

Authors:  Vladimir Yarov-Yarovoy; Jack Schonbrun; David Baker
Journal:  Proteins       Date:  2006-03-01

Review 7.  What does S-palmitoylation do to membrane proteins?

Authors:  Sanja Blaskovic; Mathieu Blanc; F Gisou van der Goot
Journal:  FEBS J       Date:  2013-04-18       Impact factor: 5.542

8.  SynDIG1: an activity-regulated, AMPA- receptor-interacting transmembrane protein that regulates excitatory synapse development.

Authors:  Evgenia Kalashnikova; Ramón A Lorca; Inderpreet Kaur; Gustavo A Barisone; Bonnie Li; Tatsuto Ishimaru; James S Trimmer; Durga P Mohapatra; Elva Díaz
Journal:  Neuron       Date:  2010-01-14       Impact factor: 17.173

9.  Palmitoylome profiling reveals S-palmitoylation-dependent antiviral activity of IFITM3.

Authors:  Jacob S Yount; Bruno Moltedo; Yu-Ying Yang; Guillaume Charron; Thomas M Moran; Carolina B López; Howard C Hang
Journal:  Nat Chem Biol       Date:  2010-07-04       Impact factor: 15.040

10.  Neural palmitoyl-proteomics reveals dynamic synaptic palmitoylation.

Authors:  Rujun Kang; Junmei Wan; Pamela Arstikaitis; Hideto Takahashi; Kun Huang; Aaron O Bailey; James X Thompson; Amy F Roth; Renaldo C Drisdel; Ryan Mastro; William N Green; John R Yates; Nicholas G Davis; Alaa El-Husseini
Journal:  Nature       Date:  2008-12-18       Impact factor: 49.962

View more
  9 in total

1.  Protein Lipidation: Occurrence, Mechanisms, Biological Functions, and Enabling Technologies.

Authors:  Hong Jiang; Xiaoyu Zhang; Xiao Chen; Pornpun Aramsangtienchai; Zhen Tong; Hening Lin
Journal:  Chem Rev       Date:  2018-01-02       Impact factor: 60.622

2.  The palmitoyltransferase ZDHHC20 enhances interferon-induced transmembrane protein 3 (IFITM3) palmitoylation and antiviral activity.

Authors:  Temet M McMichael; Lizhi Zhang; Mahesh Chemudupati; Jocelyn C Hach; Adam D Kenney; Howard C Hang; Jacob S Yount
Journal:  J Biol Chem       Date:  2017-10-27       Impact factor: 5.157

3.  Lack of BACE1 S-palmitoylation reduces amyloid burden and mitigates memory deficits in transgenic mouse models of Alzheimer's disease.

Authors:  Robert J Andrew; Celia G Fernandez; Molly Stanley; Hong Jiang; Phuong Nguyen; Richard C Rice; Virginie Buggia-Prévot; Pierre De Rossi; Kulandaivelu S Vetrivel; Raza Lamb; Arnau Argemi; Emilie S Allaert; Elle M Rathbun; Sofia V Krause; Steven L Wagner; Angèle T Parent; David M Holtzman; Gopal Thinakaran
Journal:  Proc Natl Acad Sci U S A       Date:  2017-10-23       Impact factor: 11.205

4.  SynDIG4/Prrt1 Is Required for Excitatory Synapse Development and Plasticity Underlying Cognitive Function.

Authors:  Lucas Matt; Lyndsey M Kirk; George Chenaux; David J Speca; Kyle R Puhger; Michael C Pride; Mohammad Qneibi; Tomer Haham; Kristopher E Plambeck; Yael Stern-Bach; Jill L Silverman; Jacqueline N Crawley; Johannes W Hell; Elva Díaz
Journal:  Cell Rep       Date:  2018-02-27       Impact factor: 9.423

5.  Loss of SynDIG1 Reduces Excitatory Synapse Maturation But Not Formation In Vivo.

Authors:  George Chenaux; Lucas Matt; Travis C Hill; Inderpreet Kaur; Xiao-Bo Liu; Lyndsey M Kirk; David J Speca; Samuel A McMahon; Karen Zito; Johannes W Hell; Elva Díaz
Journal:  eNeuro       Date:  2016-10-21

Review 6.  Role of Palmitoylation of Postsynaptic Proteins in Promoting Synaptic Plasticity.

Authors:  Lucas Matt; Karam Kim; Dhrubajyoti Chowdhury; Johannes W Hell
Journal:  Front Mol Neurosci       Date:  2019-01-31       Impact factor: 5.639

Review 7.  Roles of palmitoylation in structural long-term synaptic plasticity.

Authors:  Benjun Ji; Małgorzata Skup
Journal:  Mol Brain       Date:  2021-01-11       Impact factor: 4.041

8.  Functional network dynamics in a neurodevelopmental disorder of known genetic origin.

Authors:  Erin Hawkins; Danyal Akarca; Mengya Zhang; Diandra Brkić; Mark Woolrich; Kate Baker; Duncan Astle
Journal:  Hum Brain Mapp       Date:  2019-10-22       Impact factor: 5.399

9.  Post-Translational Modifications of BACE1 in Alzheimer's Disease.

Authors:  Wen Wen; Ping Li; Panwang Liu; Shijun Xu; Fushun Wang; Jason H Huang
Journal:  Curr Neuropharmacol       Date:  2022       Impact factor: 7.708

  9 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.