Literature DB >> 27431380

Mutant IDH: a targetable driver of leukemic phenotypes linking metabolism, epigenetics and transcriptional regulation.

Francine E Garrett-Bakelman1, Ari M Melnick1.   

Abstract

Aberrant epigenomic programming is a hallmark of acute myeloid leukemia. This is partially due to somatic mutations that perturb cytosine methylation, histone post-translational modifications and transcription factors. Remarkably, mutations in the IDH1 and IDH2 genes perturb the epigenome through all three of these mechanisms. Mutant IDH enzymes produce high levels of the oncometabolite (R)-2-hydroxyglutarate that competitively inhibits dioxygenase enzymes that modify methylcytosine to hydroxymethylcytosine and histone tail methylation. The development of IDH mutant specific inhibitors may now enable the therapeutic reprogramming of both layers of the epigenome spontaneously to revert the malignant phenotype of these leukemias and improve clinical outcome for acute myeloid leukemia patients with IDH mutations.

Entities:  

Keywords:  AML; DNA methylation; IDH; epigenomics; histone tail methylation; hydroxymethylcytosine; leukemogenesis; mutation; targeted therapy; transcriptional regulation

Mesh:

Substances:

Year:  2016        PMID: 27431380      PMCID: PMC5066133          DOI: 10.2217/epi-2016-0008

Source DB:  PubMed          Journal:  Epigenomics        ISSN: 1750-192X            Impact factor:   4.357


  81 in total

1.  TET1 and hydroxymethylcytosine in transcription and DNA methylation fidelity.

Authors:  Kristine Williams; Jesper Christensen; Marianne Terndrup Pedersen; Jens V Johansen; Paul A C Cloos; Juri Rappsilber; Kristian Helin
Journal:  Nature       Date:  2011-04-13       Impact factor: 49.962

2.  Tet-mediated formation of 5-carboxylcytosine and its excision by TDG in mammalian DNA.

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Journal:  Science       Date:  2011-08-04       Impact factor: 47.728

Review 3.  Targeting bromodomains: epigenetic readers of lysine acetylation.

Authors:  Panagis Filippakopoulos; Stefan Knapp
Journal:  Nat Rev Drug Discov       Date:  2014-04-22       Impact factor: 84.694

4.  Mutant IDH1 promotes leukemogenesis in vivo and can be specifically targeted in human AML.

Authors:  Anuhar Chaturvedi; Michelle Maria Araujo Cruz; Nidhi Jyotsana; Amit Sharma; Haiyang Yun; Kerstin Görlich; Martin Wichmann; Adrian Schwarzer; Matthias Preller; Felicitas Thol; Johann Meyer; Reinhard Haemmerle; Eduard A Struys; Erwin E Jansen; Ute Modlich; Zhixiong Li; Laura M Sly; Robert Geffers; Robert Lindner; Dietmar J Manstein; Ulrich Lehmann; Jürgen Krauter; Arnold Ganser; Michael Heuser
Journal:  Blood       Date:  2013-08-16       Impact factor: 22.113

Review 5.  IDH mutations in glioma and acute myeloid leukemia.

Authors:  Lenny Dang; Shengfang Jin; Shinsan M Su
Journal:  Trends Mol Med       Date:  2010-08-05       Impact factor: 11.951

6.  A 3D map of the human genome at kilobase resolution reveals principles of chromatin looping.

Authors:  Suhas S P Rao; Miriam H Huntley; Neva C Durand; Elena K Stamenova; Ivan D Bochkov; James T Robinson; Adrian L Sanborn; Ido Machol; Arina D Omer; Eric S Lander; Erez Lieberman Aiden
Journal:  Cell       Date:  2014-12-11       Impact factor: 41.582

7.  Glioma-derived mutations in IDH1 dominantly inhibit IDH1 catalytic activity and induce HIF-1alpha.

Authors:  Shimin Zhao; Yan Lin; Wei Xu; Wenqing Jiang; Zhengyu Zha; Pu Wang; Wei Yu; Zhiqiang Li; Lingling Gong; Yingjie Peng; Jianping Ding; Qunying Lei; Kun-Liang Guan; Yue Xiong
Journal:  Science       Date:  2009-04-10       Impact factor: 47.728

8.  An inhibitor of mutant IDH1 delays growth and promotes differentiation of glioma cells.

Authors:  Dan Rohle; Janeta Popovici-Muller; Nicolaos Palaskas; Sevin Turcan; Christian Grommes; Carl Campos; Jennifer Tsoi; Owen Clark; Barbara Oldrini; Evangelia Komisopoulou; Kaiko Kunii; Alicia Pedraza; Stefanie Schalm; Lee Silverman; Alexandra Miller; Fang Wang; Hua Yang; Yue Chen; Andrew Kernytsky; Marc K Rosenblum; Wei Liu; Scott A Biller; Shinsan M Su; Cameron W Brennan; Timothy A Chan; Thomas G Graeber; Katharine E Yen; Ingo K Mellinghoff
Journal:  Science       Date:  2013-04-04       Impact factor: 47.728

9.  Oncometabolite 2-hydroxyglutarate is a competitive inhibitor of α-ketoglutarate-dependent dioxygenases.

Authors:  Wei Xu; Hui Yang; Ying Liu; Ying Yang; Ping Wang; Se-Hee Kim; Shinsuke Ito; Chen Yang; Pu Wang; Meng-Tao Xiao; Li-xia Liu; Wen-qing Jiang; Jing Liu; Jin-ye Zhang; Bin Wang; Stephen Frye; Yi Zhang; Yan-hui Xu; Qun-ying Lei; Kun-Liang Guan; Shi-min Zhao; Yue Xiong
Journal:  Cancer Cell       Date:  2011-01-18       Impact factor: 38.585

10.  Loss of TET2 in hematopoietic cells leads to DNA hypermethylation of active enhancers and induction of leukemogenesis.

Authors:  Kasper D Rasmussen; Guangshuai Jia; Jens V Johansen; Marianne T Pedersen; Nicolas Rapin; Frederik O Bagger; Bo T Porse; Olivier A Bernard; Jesper Christensen; Kristian Helin
Journal:  Genes Dev       Date:  2015-04-17       Impact factor: 11.361

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  10 in total

1.  IDH Mutation, Competitive Inhibition of FTO, and RNA Methylation.

Authors:  Sara M Elkashef; An-Ping Lin; Jamie Myers; Heinz Sill; Daifeng Jiang; Patricia L M Dahia; Ricardo C T Aguiar
Journal:  Cancer Cell       Date:  2017-05-08       Impact factor: 31.743

2.  Isocitrate dehydrogenase mutations are associated with altered IL-1β responses in acute myeloid leukemia.

Authors:  Kathryn I Sunthankar; Matthew T Jenkins; Candace H Cote; Sweta B Patel; Robert S Welner; P Brent Ferrell
Journal:  Leukemia       Date:  2021-12-02       Impact factor: 12.883

3.  Rational Targeting of Cooperating Layers of the Epigenome Yields Enhanced Therapeutic Efficacy against AML.

Authors:  Cihangir Duy; Matt Teater; Francine E Garrett-Bakelman; Tak C Lee; Cem Meydan; Jacob L Glass; Meng Li; Johannes C Hellmuth; Helai P Mohammad; Kimberly N Smitheman; Alan H Shih; Omar Abdel-Wahab; Martin S Tallman; Monica L Guzman; David Muench; H Leighton Grimes; Gail J Roboz; Ryan G Kruger; Caretha L Creasy; Elisabeth M Paietta; Ross L Levine; Martin Carroll; Ari M Melnick
Journal:  Cancer Discov       Date:  2019-05-10       Impact factor: 39.397

Review 4.  The Process and Regulatory Components of Inflammation in Brain Oncogenesis.

Authors:  A G M Mostofa; Surendra R Punganuru; Hanumantha Rao Madala; Mohammad Al-Obaide; Kalkunte S Srivenugopal
Journal:  Biomolecules       Date:  2017-03-27

Review 5.  The Role for Myc in Coordinating Glycolysis, Oxidative Phosphorylation, Glutaminolysis, and Fatty Acid Metabolism in Normal and Neoplastic Tissues.

Authors:  Eric S Goetzman; Edward V Prochownik
Journal:  Front Endocrinol (Lausanne)       Date:  2018-04-12       Impact factor: 5.555

6.  Targeted next generation sequencing identified clinically actionable mutations in patients with esophageal sarcomatoid carcinoma.

Authors:  Hongyang Lu; Shifeng Yang; Huineng Zhu; Xiaoling Tong; Fajun Xie; Jing Qin; Na Han; Xue Wu; Yun Fan; Yang W Shao; Weimin Mao
Journal:  BMC Cancer       Date:  2018-03-05       Impact factor: 4.430

Review 7.  IDH1-mutated relapsed or refractory AML: current challenges and future prospects.

Authors:  Juan Eduardo Megías-Vericat; Octavio Ballesta-López; Eva Barragán; Pau Montesinos
Journal:  Blood Lymphat Cancer       Date:  2019-06-27

8.  Detection Of Mutations In The Isocitrate Dehydrogenase Genes (IDH1/IDH2) Using castPCRTM In Patients With AML And Their Clinical Impact In Mexico City.

Authors:  Irma Olarte; Anel García; Christian Ramos; Brenda Arratia; Federico Centeno; Johanna Paredes; Etta Rozen; Juan Kassack; Juan Collazo; Adolfo Martínez
Journal:  Onco Targets Ther       Date:  2019-10-01       Impact factor: 4.147

9.  A Phase II Trial of the Double Epigenetic Priming Regimen Including Chidamide and Decitabine for Relapsed/Refractory Acute Myeloid Leukemia.

Authors:  Jia Yin; Chao-Ling Wan; Ling Zhang; Hao Zhang; Lian Bai; Hai-Xia Zhou; Ming-Zhu Xu; Li-Yun Chen; Chong-Sheng Qian; Hui-Ying Qiu; Su-Ning Chen; Xiao-Wen Tang; De-Pei Wu; Yan-Ming Zhang; Ai-Ning Sun; Sheng-Li Xue
Journal:  Front Oncol       Date:  2021-09-03       Impact factor: 6.244

10.  The effects of mutational processes and selection on driver mutations across cancer types.

Authors:  Daniel Temko; Ian P M Tomlinson; Simone Severini; Benjamin Schuster-Böckler; Trevor A Graham
Journal:  Nat Commun       Date:  2018-05-10       Impact factor: 14.919

  10 in total

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