Literature DB >> 27423861

Rapid Semisynthesis of Acetylated and Sumoylated Histone Analogs.

A Dhall1, C E Weller1, C Chatterjee2.   

Abstract

The density and diversity of posttranslational modifications (PTMs) observed in histone proteins typically limit their purification to homogeneity from biological sources. Access to quantities of uniformly modified histones is, however, critical for investigating the downstream effects of histone PTMs on chromatin-templated processes. Therefore, a number of semisynthetic methodologies have been developed to generate histones bearing precisely defined PTMs or close analogs thereof. In this chapter, we present two optimized and rapid strategies for generating functional analogs of site-specifically acetylated and sumoylated histones. First, we describe a convergent strategy to site-specifically attach the small ubiquitin-like modifier-3 (SUMO-3) protein to the site of Lys12 in histone H4 by means of a disulfide linkage. We then describe the generation of thialysine analogs of histone H3 acetylated at Lys14 or Lys56, using thiol-ene coupling chemistry. Both strategies afford multimilligram quantities of uniformly modified histones that are easily incorporated into mononucleosomes and nucleosome arrays for biophysical and biochemical investigations. These methods are readily extendable to any desired sites in the four core nucleosomal histones and their variant forms.
© 2016 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  Acetylation; Chromatin; Disulfide; Histone; SUMO; Sumoylation semisynthesis

Mesh:

Substances:

Year:  2016        PMID: 27423861      PMCID: PMC5183458          DOI: 10.1016/bs.mie.2016.01.005

Source DB:  PubMed          Journal:  Methods Enzymol        ISSN: 0076-6879            Impact factor:   1.600


  30 in total

1.  Chromatin fiber folding: requirement for the histone H4 N-terminal tail.

Authors:  Benedetta Dorigo; Thomas Schalch; Kerstin Bystricky; Timothy J Richmond
Journal:  J Mol Biol       Date:  2003-03-14       Impact factor: 5.469

2.  Histone sumoylation is associated with transcriptional repression.

Authors:  Yuzuru Shiio; Robert N Eisenman
Journal:  Proc Natl Acad Sci U S A       Date:  2003-10-24       Impact factor: 11.205

Review 3.  Epigenetic modifications and human disease.

Authors:  Anna Portela; Manel Esteller
Journal:  Nat Biotechnol       Date:  2010-10       Impact factor: 54.908

4.  A novel proteomics approach to identify SUMOylated proteins and their modification sites in human cells.

Authors:  Frederic Galisson; Louiza Mahrouche; Mathieu Courcelles; Eric Bonneil; Sylvain Meloche; Mounira K Chelbi-Alix; Pierre Thibault
Journal:  Mol Cell Proteomics       Date:  2010-11-22       Impact factor: 5.911

Review 5.  Functions of site-specific histone acetylation and deacetylation.

Authors:  Mona D Shahbazian; Michael Grunstein
Journal:  Annu Rev Biochem       Date:  2007       Impact factor: 23.643

6.  Pervasive combinatorial modification of histone H3 in human cells.

Authors:  Benjamin A Garcia; James J Pesavento; Craig A Mizzen; Neil L Kelleher
Journal:  Nat Methods       Date:  2007-05-21       Impact factor: 28.547

7.  Histone H2B (and H2A) ubiquitination allows normal histone octamer and core particle reconstitution.

Authors:  N Davies; G G Lindsey
Journal:  Biochim Biophys Acta       Date:  1994-06-21

8.  Expressed protein ligation: a general method for protein engineering.

Authors:  T W Muir; D Sondhi; P A Cole
Journal:  Proc Natl Acad Sci U S A       Date:  1998-06-09       Impact factor: 11.205

9.  The site-specific installation of methyl-lysine analogs into recombinant histones.

Authors:  Matthew D Simon; Feixia Chu; Lisa R Racki; Cecile C de la Cruz; Alma L Burlingame; Barbara Panning; Geeta J Narlikar; Kevan M Shokat
Journal:  Cell       Date:  2007-03-09       Impact factor: 41.582

10.  Uncovering global SUMOylation signaling networks in a site-specific manner.

Authors:  Ivo A Hendriks; Rochelle C J D'Souza; Bing Yang; Matty Verlaan-de Vries; Matthias Mann; Alfred C O Vertegaal
Journal:  Nat Struct Mol Biol       Date:  2014-09-14       Impact factor: 15.369

View more
  2 in total

Review 1.  Strategies for Generating Modified Nucleosomes: Applications within Structural Biology Studies.

Authors:  Catherine A Musselman; Tatiana G Kutateladze
Journal:  ACS Chem Biol       Date:  2019-03-12       Impact factor: 5.100

2.  A Highly Efficient Synthesis of Polyubiquitin Chains.

Authors:  Qian Qu; Man Pan; Shuai Gao; Qing-Yun Zheng; Yuan-Yuan Yu; Jia-Can Su; Xiang Li; Hong-Gang Hu
Journal:  Adv Sci (Weinh)       Date:  2018-05-14       Impact factor: 16.806

  2 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.