Literature DB >> 27419466

Engineering an NADPH/NADP+ Redox Biosensor in Yeast.

Jie Zhang1, Nikolaus Sonnenschein1, Thomas P B Pihl1, Kasper R Pedersen1, Michael K Jensen1, Jay D Keasling1,2,3.   

Abstract

Genetically encoded biosensors have emerged as powerful tools for timely and precise in vivo evaluation of cellular metabolism. In particular, biosensors that can couple intercellular cues with downstream signaling responses are currently attracting major attention within health science and biotechnology. Still, there is a need for bioprospecting and engineering of more biosensors to enable real-time monitoring of specific cellular states and controlling downstream actuation. In this study, we report the engineering and application of a transcription factor-based NADPH/NADP+ redox biosensor in the budding yeast Saccharomyces cerevisiae. Using the biosensor, we are able to monitor the cause of oxidative stress by chemical induction, and changes in NADPH/NADP+ ratios caused by genetic manipulations. Because of the regulatory potential of the biosensor, we also show that the biosensor can actuate upon NADPH deficiency by activation of NADPH regeneration. Finally, we couple the biosensor with an expression of dosage-sensitive genes (DSGs) and thereby create a novel tunable sensor-selector useful for synthetic selection of cells with higher NADPH/NADP+ ratios from mixed cell populations. We show that the combination of exploitation and rational engineering of native signaling components is applicable for diagnosis, regulation, and selection of cellular redox states.

Entities:  

Keywords:  biosensor; dosage-sensitive genes; redox; yeast

Mesh:

Substances:

Year:  2016        PMID: 27419466     DOI: 10.1021/acssynbio.6b00135

Source DB:  PubMed          Journal:  ACS Synth Biol        ISSN: 2161-5063            Impact factor:   5.110


  16 in total

Review 1.  Redox Systems Biology: Harnessing the Sentinels of the Cysteine Redoxome.

Authors:  Jason M Held
Journal:  Antioxid Redox Signal       Date:  2019-09-09       Impact factor: 8.401

Review 2.  Redox cofactor engineering in industrial microorganisms: strategies, recent applications and future directions.

Authors:  Jiaheng Liu; Huiling Li; Guangrong Zhao; Qinggele Caiyin; Jianjun Qiao
Journal:  J Ind Microbiol Biotechnol       Date:  2018-03-27       Impact factor: 3.346

3.  In vivo biosensors: mechanisms, development, and applications.

Authors:  Shuobo Shi; Ee Lui Ang; Huimin Zhao
Journal:  J Ind Microbiol Biotechnol       Date:  2018-01-29       Impact factor: 3.346

Review 4.  Oxidative stress response pathways in fungi.

Authors:  Hajar Yaakoub; Sara Mina; Alphonse Calenda; Jean-Philippe Bouchara; Nicolas Papon
Journal:  Cell Mol Life Sci       Date:  2022-06-01       Impact factor: 9.261

5.  Assessment of fluorescent protein candidates for multi-color flow cytometry analysis of Saccharomyces cerevisiae.

Authors:  Raquel Perruca-Foncillas; Johan Davidsson; Magnus Carlquist; Marie F Gorwa-Grauslund
Journal:  Biotechnol Rep (Amst)       Date:  2022-04-26

6.  Allosteric inhibition of MTHFR prevents futile SAM cycling and maintains nucleotide pools in one-carbon metabolism.

Authors:  Muskan Bhatia; Jyotika Thakur; Shradha Suyal; Ruchika Oniel; Rahul Chakraborty; Shalini Pradhan; Monika Sharma; Shantanu Sengupta; Sunil Laxman; Shyam Kumar Masakapalli; Anand Kumar Bachhawat
Journal:  J Biol Chem       Date:  2020-09-15       Impact factor: 5.157

Review 7.  Blueprints for Biosensors: Design, Limitations, and Applications.

Authors:  Alexander C Carpenter; Ian T Paulsen; Thomas C Williams
Journal:  Genes (Basel)       Date:  2018-07-26       Impact factor: 4.096

8.  Displaced by Deceivers: Prevention of Biosensor Cross-Talk Is Pivotal for Successful Biosensor-Based High-Throughput Screening Campaigns.

Authors:  Lion Konstantin Flachbart; Sascha Sokolowsky; Jan Marienhagen
Journal:  ACS Synth Biol       Date:  2019-07-23       Impact factor: 5.110

9.  Development of a formaldehyde biosensor with application to synthetic methylotrophy.

Authors:  Benjamin M Woolston; Timothy Roth; Ishwar Kohale; David R Liu; Gregory Stephanopoulos
Journal:  Biotechnol Bioeng       Date:  2017-11-03       Impact factor: 4.530

Review 10.  Yeast-Based Biosensors: Current Applications and New Developments.

Authors:  Helene Martin-Yken
Journal:  Biosensors (Basel)       Date:  2020-05-13
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