Literature DB >> 27417121

The genome editing revolution: A CRISPR-Cas TALE off-target story.

Stefano Stella1, Guillermo Montoya1.   

Abstract

In the last 10 years, we have witnessed a blooming of targeted genome editing systems and applications. The area was revolutionized by the discovery and characterization of the transcription activator-like effector proteins, which are easier to engineer to target new DNA sequences than the previously available DNA binding templates, zinc fingers and meganucleases. Recently, the area experimented a quantum leap because of the introduction of the clustered regularly interspaced short palindromic repeats (CRISPR)-associated protein (Cas) system (clustered regularly interspaced short palindromic sequence). This ribonucleoprotein complex protects bacteria from invading DNAs, and it was adapted to be used in genome editing. The CRISPR ribonucleic acid (RNA) molecule guides to the specific DNA site the Cas9 nuclease to cleave the DNA target. Two years and more than 1000 publications later, the CRISPR-Cas system has become the main tool for genome editing in many laboratories. Currently the targeted genome editing technology has been used in many fields and may be a possible approach for human gene therapy. Furthermore, it can also be used to modifying the genomes of model organisms for studying human pathways or to improve key organisms for biotechnological applications, such as plants, livestock genome as well as yeasts and bacterial strains.
© 2016 The Authors. BioEssays published by WILEY Periodicals, Inc.

Entities:  

Keywords:  CRISPR-Cas9; TALE; engineered nucleases; genome editing; specificity

Mesh:

Year:  2016        PMID: 27417121     DOI: 10.1002/bies.201670903

Source DB:  PubMed          Journal:  Bioessays        ISSN: 0265-9247            Impact factor:   4.345


  21 in total

1.  Re-engineered RNA-Guided FokI-Nucleases for Improved Genome Editing in Human Cells.

Authors:  Steven Havlicek; Yang Shen; Yunus Alpagu; Michaela B Bruntraeger; Nurdiana B M Zufir; Zhi Yi Phuah; Zhiyan Fu; Norris R Dunn; Lawrence W Stanton
Journal:  Mol Ther       Date:  2017-02-01       Impact factor: 11.454

Review 2.  Class 2 CRISPR-Cas RNA-guided endonucleases: Swiss Army knives of genome editing.

Authors:  Stefano Stella; Pablo Alcón; Guillermo Montoya
Journal:  Nat Struct Mol Biol       Date:  2017-10-16       Impact factor: 15.369

Review 3.  The past and presence of gene targeting: from chemicals and DNA via proteins to RNA.

Authors:  T M Geel; M H J Ruiters; R H Cool; L Halby; D C Voshart; L Andrade Ruiz; K E Niezen-Koning; P B Arimondo; M G Rots
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2018-06-05       Impact factor: 6.237

Review 4.  Making ends meet: targeted integration of DNA fragments by genome editing.

Authors:  Yutaka Yamamoto; Susan A Gerbi
Journal:  Chromosoma       Date:  2018-07-12       Impact factor: 4.316

5.  Can Designer Indels Be Tailored by Gene Editing?: Can Indels Be Customized?

Authors:  Sara G Trimidal; Ronald Benjamin; Ji Eun Bae; Mira V Han; Elizabeth Kong; Aaron Singer; Tyler S Williams; Bing Yang; Martin R Schiller
Journal:  Bioessays       Date:  2019-11-06       Impact factor: 4.345

Review 6.  Zebrafish In Vivo Models of Cancer and Metastasis.

Authors:  Katy R Astell; Dirk Sieger
Journal:  Cold Spring Harb Perspect Med       Date:  2020-08-03       Impact factor: 5.159

Review 7.  Engineering Plant Immunity: Using CRISPR/Cas9 to Generate Virus Resistance.

Authors:  Syed Shan-E-Ali Zaidi; Manal Tashkandi; Shahid Mansoor; Magdy M Mahfouz
Journal:  Front Plant Sci       Date:  2016-11-08       Impact factor: 5.753

Review 8.  Editing the Neuronal Genome: a CRISPR View of Chromatin Regulation in Neuronal Development, Function, and Plasticity.

Authors:  Marty G Yang; Anne E West
Journal:  Yale J Biol Med       Date:  2016-12-23

9.  CRISPR-ON-Mediated KLF4 overexpression inhibits the proliferation, migration and invasion of urothelial bladder cancer in vitro and in vivo.

Authors:  Xin Xu; Jiangfeng Li; Yi Zhu; Bo Xie; Xiao Wang; Song Wang; Haiyun Xie; Huaqing Yan; Yufan Ying; Yiwei Lin; Ben Liu; Wei Wang; Xiangyi Zheng
Journal:  Oncotarget       Date:  2017-10-27

Review 10.  Autoimmunity in plants.

Authors:  Joydeep Chakraborty; Prithwi Ghosh; Sampa Das
Journal:  Planta       Date:  2018-07-25       Impact factor: 4.116

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