Literature DB >> 27415469

Bioengineered non-coding RNA agent (BERA) in action.

Zhijian Duan1, Ai-Ming Yu1.   

Abstract

Non-coding RNAs (ncRNAs) including microRNAs (miRNAs) and small interfering RNAs (siRNAs) are important players in the control of gene regulation and represent novel promising therapeutic targets or agents for the treatment of various diseases. While synthetic ncRNAs are predominately utilized, the effects of excessive artificial modifications on higher-order structures, activities and toxicities of ncRNAs remain uncertain. Inspired by recombinant protein technology allowing large-scale bioengineering of proteins for research and therapy, efforts have been made to develop practical and effective means to bioengineer ncRNA agents. The fermentation-based approaches shall offer biological ncRNA agents with natural modifications and proper folding critical for ncRNA structure, function and safety. In this article, we will summarize current recombinant RNA platforms to the production of ncRNA agents including siRNAs and miRNAs. The applications of bioengineered ncRNA agents for basic research and potential therapeutics are also discussed.

Entities:  

Keywords:  bioengineering; cancer; miRNA; non-coding RNAs; siRNA; therapy

Mesh:

Substances:

Year:  2016        PMID: 27415469      PMCID: PMC5094625          DOI: 10.1080/21655979.2016.1207011

Source DB:  PubMed          Journal:  Bioengineered        ISSN: 2165-5979            Impact factor:   3.269


  45 in total

1.  Fluorescence imaging of cellular metabolites with RNA.

Authors:  Jeremy S Paige; Thinh Nguyen-Duc; Wenjiao Song; Samie R Jaffrey
Journal:  Science       Date:  2012-03-09       Impact factor: 47.728

2.  Synthesis of RNA by in vitro transcription.

Authors:  Bertrand Beckert; Benoît Masquida
Journal:  Methods Mol Biol       Date:  2011

Review 3.  Protein therapeutics: a summary and pharmacological classification.

Authors:  Benjamin Leader; Quentin J Baca; David E Golan
Journal:  Nat Rev Drug Discov       Date:  2008-01       Impact factor: 84.694

4.  A generic protocol for the expression and purification of recombinant RNA in Escherichia coli using a tRNA scaffold.

Authors:  Luc Ponchon; Geneviève Beauvais; Sylvie Nonin-Lecomte; Frédéric Dardel
Journal:  Nat Protoc       Date:  2009-05-28       Impact factor: 13.491

5.  Useful properties of restriction enzymes that recognize interrupted palindromes.

Authors:  C Pitulle; K O Hedenstierna; G E Fox
Journal:  Biotechniques       Date:  1996-10       Impact factor: 1.993

Review 6.  Bioengineering of noncoding RNAs for research agents and therapeutics.

Authors:  Pui Yan Ho; Ai-Ming Yu
Journal:  Wiley Interdiscip Rev RNA       Date:  2016-01-13       Impact factor: 9.957

7.  Engineered 5S ribosomal RNAs displaying aptamers recognizing vascular endothelial growth factor and malachite green.

Authors:  Xing Zhang; Ajish S R Potty; George W Jackson; Victor Stepanov; Andrew Tang; Yamei Liu; Katerina Kourentzi; Ulrich Strych; George E Fox; Richard C Willson
Journal:  J Mol Recognit       Date:  2009 Mar-Apr       Impact factor: 2.137

8.  Co-expression of RNA-protein complexes in Escherichia coli and applications to RNA biology.

Authors:  Luc Ponchon; Marjorie Catala; Bili Seijo; Marguerite El Khouri; Frédéric Dardel; Sylvie Nonin-Lecomte; Carine Tisné
Journal:  Nucleic Acids Res       Date:  2013-06-26       Impact factor: 16.971

Review 9.  Current prospects for RNA interference-based therapies.

Authors:  Beverly L Davidson; Paul B McCray
Journal:  Nat Rev Genet       Date:  2011-05       Impact factor: 53.242

10.  Genetically engineered pre-microRNA-34a prodrug suppresses orthotopic osteosarcoma xenograft tumor growth via the induction of apoptosis and cell cycle arrest.

Authors:  Yong Zhao; Mei-Juan Tu; Wei-Peng Wang; Jing-Xin Qiu; Ai-Xi Yu; Ai-Ming Yu
Journal:  Sci Rep       Date:  2016-05-24       Impact factor: 4.379

View more
  13 in total

1.  New insights for therapeutic recombinant human miRNAs heterologous production: Rhodovolum sulfidophilum vs Escherichia coli.

Authors:  Patrícia Pereira; Augusto Q Pedro; João A Queiroz; Ana R Figueiras; Fani Sousa
Journal:  Bioengineered       Date:  2017-03-10       Impact factor: 3.269

Review 2.  RNA therapy: Are we using the right molecules?

Authors:  Ai-Ming Yu; Chao Jian; Allan H Yu; Mei-Juan Tu
Journal:  Pharmacol Ther       Date:  2018-12-04       Impact factor: 12.310

3.  Effects of MicroRNA-34a on the Pharmacokinetics of Cytochrome P450 Probe Drugs in Mice.

Authors:  Joseph L Jilek; Ye Tian; Ai-Ming Yu
Journal:  Drug Metab Dispos       Date:  2017-03-02       Impact factor: 3.922

4.  Bioengineered miR-34a modulates mitochondrial inner membrane protein 17 like 2 (MPV17L2) expression toward the control of cancer cell mitochondrial functions.

Authors:  Wan-Rong Yi; Mei-Juan Tu; Ai-Xi Yu; Jun Lin; Ai-Ming Yu
Journal:  Bioengineered       Date:  2022-05       Impact factor: 6.832

5.  Bioengineered NRF2-siRNA Is Effective to Interfere with NRF2 Pathways and Improve Chemosensitivity of Human Cancer Cells.

Authors:  Peng-Cheng Li; Mei-Juan Tu; Pui Yan Ho; Joseph L Jilek; Zhijian Duan; Qian-Yu Zhang; Ai-Xi Yu; Ai-Ming Yu
Journal:  Drug Metab Dispos       Date:  2017-10-23       Impact factor: 3.922

6.  Co-targeting of DNA, RNA, and protein molecules provides optimal outcomes for treating osteosarcoma and pulmonary metastasis in spontaneous and experimental metastasis mouse models.

Authors:  Chao Jian; Mei-Juan Tu; Pui Yan Ho; Zhijian Duan; Qianyu Zhang; Jing-Xin Qiu; Ralph W DeVere White; Theodore Wun; Primo N Lara; Kit S Lam; Ai-Xi Yu; Ai-Ming Yu
Journal:  Oncotarget       Date:  2017-05-09

7.  Targeting MIAT reduces apoptosis of cardiomyocytes after ischemia/reperfusion injury.

Authors:  Longying Chen; Dianlong Zhang; Li Yu; He Dong
Journal:  Bioengineered       Date:  2019-12       Impact factor: 3.269

Review 8.  Novel approaches for efficient  in vivo fermentation production of noncoding RNAs.

Authors:  Ai-Ming Yu; Neelu Batra; Mei-Juan Tu; Colleen Sweeney
Journal:  Appl Microbiol Biotechnol       Date:  2020-01-17       Impact factor: 4.813

Review 9.  A guide to large-scale RNA sample preparation.

Authors:  Lorenzo Baronti; Hampus Karlsson; Maja Marušič; Katja Petzold
Journal:  Anal Bioanal Chem       Date:  2018-03-15       Impact factor: 4.142

Review 10.  Current trends in drug metabolism and pharmacokinetics.

Authors:  Yuhua Li; Qiang Meng; Mengbi Yang; Dongyang Liu; Xiangyu Hou; Lan Tang; Xin Wang; Yuanfeng Lyu; Xiaoyan Chen; Kexin Liu; Ai-Ming Yu; Zhong Zuo; Huichang Bi
Journal:  Acta Pharm Sin B       Date:  2019-10-18       Impact factor: 11.413

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.