Literature DB >> 27410423

Construction of Thermophilic Xylanase and Its Structural Analysis.

Masahiro Watanabe1,2, Harumi Fukada3, Kazuhiko Ishikawa1,4.   

Abstract

The glycoside hydrolase family 11 xylanase has been utilized in a wide variety of industrial applications, from food processing to kraft pulp bleaching. Thermostability enhances the economic value of industrial enzymes by making them more robust. Recently, we determined the crystal structure of an endo-β-1,4-xylanase (GH11) from mesophilic Talaromyces cellulolyticus, named XylC. Ligand-free XylC exists to two conformations (open and closed forms). We found that the "closed" structure possessed an unstable region within the N-terminal region far from the active site. In this study, we designed the thermostable xylanase by the structure-based site-directed mutagenesis on the N-terminal region. In total, nine mutations (S35C, N44H, Y61M, T62C, N63L, D65P, N66G, T101P, and S102N) and an introduced disulfide bond of the enzyme contributed to the improvement in thermostability. By combining the mutations, we succeeded in constructing a mutant for which the melting temperature was partially additively increased by >20 °C (measured by differential scanning calorimetry) and the activity was additively enhanced at elevated temperatures, without loss of the original specific activity. The crystal structure of the most thermostable mutant was determined at 2.0 Å resolution to elucidate the structural basis of thermostability. From the crystal structure of the mutant, it was revealed that the formation of a disulfide bond induces new C-C contacts and a conformational change in the N-terminus. The resulting induced conformational change in the N-terminus is key for stabilizing this region and for constructing thermostable mutants without compromising the activity.

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Year:  2016        PMID: 27410423     DOI: 10.1021/acs.biochem.6b00414

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  3 in total

1.  Putative role of invariant water molecules in the X-ray structures of family G fungal endoxylanases.

Authors:  Protyusha Dey; Hridoy R Bairagya; Amit Roy
Journal:  J Biosci       Date:  2018-06       Impact factor: 1.826

2.  Structural Analysis and Construction of a Thermostable Antifungal Chitinase.

Authors:  Dan Kozome; Keiko Uechi; Toki Taira; Harumi Fukada; Tomomi Kubota; Kazuhiko Ishikawa
Journal:  Appl Environ Microbiol       Date:  2022-06-02       Impact factor: 5.005

3.  Improving the temperature characteristics and catalytic efficiency of a mesophilic xylanase from Aspergillus oryzae, AoXyn11A, by iterative mutagenesis based on in silico design.

Authors:  Xue-Qing Li; Qin Wu; Die Hu; Rui Wang; Yan Liu; Min-Chen Wu; Jian-Fang Li
Journal:  AMB Express       Date:  2017-05-15       Impact factor: 3.298

  3 in total

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