Literature DB >> 27404257

Just So Stories about the Evolution of Apoptosis.

Douglas R Green1, Patrick Fitzgerald2.   

Abstract

Apoptosis is a form of active cell death engaged by developmental cues as well as many different cellular stresses in which the dying cell essentially 'packages' itself for removal. The process of apoptotic cell death, as defined at the molecular level, is unique to the Metazoa (animals). Yet active cell death exists in non-animal organisms, and in some cases molecules involved in such death show some sequence similarities to those involved in apoptosis, leading to extensive speculation regarding the evolution of apoptosis. Here, we examine such speculation from the perspective of the functional properties of molecules of the mitochondrial apoptotic cell death pathway. We suggest scenarios for the evolution of one pathway of apoptosis, the mitochondrial pathway, and consider how they might be tested. We conclude with a 'Just So Story' of how the mitochondrial pathway of apoptosis might have evolved during eukaryotic evolution.
Copyright © 2016 Elsevier Ltd. All rights reserved.

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Year:  2016        PMID: 27404257      PMCID: PMC4972582          DOI: 10.1016/j.cub.2016.05.023

Source DB:  PubMed          Journal:  Curr Biol        ISSN: 0960-9822            Impact factor:   10.834


  64 in total

Review 1.  Caspase activation: the induced-proximity model.

Authors:  G S Salvesen; V M Dixit
Journal:  Proc Natl Acad Sci U S A       Date:  1999-09-28       Impact factor: 11.205

Review 2.  Signaling pathways that regulate life and cell death: evolution of apoptosis in the context of self-defense.

Authors:  Cristina Muñoz-Pinedo
Journal:  Adv Exp Med Biol       Date:  2012       Impact factor: 2.622

3.  Mitochondrial pathway of apoptosis is ancestral in metazoans.

Authors:  Cheryl E Bender; Patrick Fitzgerald; Stephen W G Tait; Fabien Llambi; Gavin P McStay; Douglas O Tupper; Jason Pellettieri; Alejandro Sánchez Alvarado; Guy S Salvesen; Douglas R Green
Journal:  Proc Natl Acad Sci U S A       Date:  2012-03-13       Impact factor: 11.205

Review 4.  Clearance of Apoptotic Cells and Pyrenocytes.

Authors:  Satoshi Toda; Chihiro Nishi; Yuichi Yanagihashi; Katsumori Segawa; Shigekazu Nagata
Journal:  Curr Top Dev Biol       Date:  2015-09-11       Impact factor: 4.897

5.  The two Drosophila cytochrome C proteins can function in both respiration and caspase activation.

Authors:  Eli Arama; Maya Bader; Mayank Srivastava; Andreas Bergmann; Hermann Steller
Journal:  EMBO J       Date:  2005-12-15       Impact factor: 11.598

6.  Tudor staphylococcal nuclease is an evolutionarily conserved component of the programmed cell death degradome.

Authors:  Jens F Sundström; Alena Vaculova; Andrei P Smertenko; Eugene I Savenkov; Anna Golovko; Elena Minina; Budhi S Tiwari; Salvador Rodriguez-Nieto; Andrey A Zamyatnin; Tuuli Välineva; Juha Saarikettu; Mikko J Frilander; Maria F Suarez; Anton Zavialov; Ulf Ståhl; Patrick J Hussey; Olli Silvennoinen; Eva Sundberg; Boris Zhivotovsky; Peter V Bozhkov
Journal:  Nat Cell Biol       Date:  2009-10-11       Impact factor: 28.824

7.  Structure of the CED-4-CED-9 complex provides insights into programmed cell death in Caenorhabditis elegans.

Authors:  Nieng Yan; Jijie Chai; Eui Seung Lee; Lichuan Gu; Qun Liu; Jiaqing He; Jia-Wei Wu; David Kokel; Huilin Li; Quan Hao; Ding Xue; Yigong Shi
Journal:  Nature       Date:  2005-10-06       Impact factor: 49.962

8.  The soluble form of Bax regulates mitochondrial fusion via MFN2 homotypic complexes.

Authors:  Suzanne Hoppins; Frank Edlich; Megan M Cleland; Soojay Banerjee; J Michael McCaffery; Richard J Youle; Jodi Nunnari
Journal:  Mol Cell       Date:  2011-01-21       Impact factor: 17.970

9.  Role for CED-9 and Egl-1 as regulators of mitochondrial fission and fusion dynamics.

Authors:  Petrina Delivani; Colin Adrain; Rebecca C Taylor; Patrick J Duriez; Seamus J Martin
Journal:  Mol Cell       Date:  2006-03-17       Impact factor: 17.970

10.  The role of ARK in stress-induced apoptosis in Drosophila cells.

Authors:  Katja C Zimmermann; Jean-Ehrland Ricci; Nathalie M Droin; Douglas R Green
Journal:  J Cell Biol       Date:  2002-03-18       Impact factor: 10.539

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  29 in total

1.  Crystal structure of the programmed cell death 5 protein from Sulfolobus solfataricus.

Authors:  Kuan Fu Lin; Jia Yuan Hsu; Dong Lin Hsieh; Meng Ju Tsai; Ching Hui Yeh; Chin Yu Chen
Journal:  Acta Crystallogr F Struct Biol Commun       Date:  2019-01-23       Impact factor: 1.056

2.  Symbiotic Origin of Apoptosis.

Authors:  Szymon Kaczanowski
Journal:  Results Probl Cell Differ       Date:  2020

Review 3.  "Only a Life Lived for Others Is Worth Living": Redox Signaling by Oxygenated Phospholipids in Cell Fate Decisions.

Authors:  Yulia Y Tyurina; Indira Shrivastava; Vladimir A Tyurin; Gaowei Mao; Haider H Dar; Simon Watkins; Michael Epperly; Ivet Bahar; Anna A Shvedova; Bruce Pitt; Sally E Wenzel; Rama K Mallampalli; Yoel Sadovsky; Dmitry Gabrilovich; Joel S Greenberger; Hülya Bayır; Valerian E Kagan
Journal:  Antioxid Redox Signal       Date:  2017-10-16       Impact factor: 8.401

Review 4.  Mechanism of interaction between autophagy and apoptosis in cancer.

Authors:  Shreya Das; Nidhi Shukla; Shashi Shekhar Singh; Sapana Kushwaha; Richa Shrivastava
Journal:  Apoptosis       Date:  2021-09-12       Impact factor: 4.677

5.  Ca2+-mediated mitochondrial inner membrane permeabilization induces cell death independently of Bax and Bak.

Authors:  Giovanni Quarato; Fabien Llambi; Cliff S Guy; Jaeki Min; Marisa Actis; Huan Sun; Shilpa Narina; Shondra M Pruett-Miller; Junmin Peng; Zoran Rankovic; Douglas R Green
Journal:  Cell Death Differ       Date:  2022-06-20       Impact factor: 12.067

6.  Apoptosis is not conserved in plants as revealed by critical examination of a model for plant apoptosis-like cell death.

Authors:  Elena A Minina; Adrian N Dauphinee; Florentine Ballhaus; Vladimir Gogvadze; Andrei P Smertenko; Peter V Bozhkov
Journal:  BMC Biol       Date:  2021-05-12       Impact factor: 7.431

Review 7.  Molecular mechanisms of cell death: recommendations of the Nomenclature Committee on Cell Death 2018.

Authors:  Lorenzo Galluzzi; Ilio Vitale; Stuart A Aaronson; John M Abrams; Dieter Adam; Patrizia Agostinis; Emad S Alnemri; Lucia Altucci; Ivano Amelio; David W Andrews; Margherita Annicchiarico-Petruzzelli; Alexey V Antonov; Eli Arama; Eric H Baehrecke; Nickolai A Barlev; Nicolas G Bazan; Francesca Bernassola; Mathieu J M Bertrand; Katiuscia Bianchi; Mikhail V Blagosklonny; Klas Blomgren; Christoph Borner; Patricia Boya; Catherine Brenner; Michelangelo Campanella; Eleonora Candi; Didac Carmona-Gutierrez; Francesco Cecconi; Francis K-M Chan; Navdeep S Chandel; Emily H Cheng; Jerry E Chipuk; John A Cidlowski; Aaron Ciechanover; Gerald M Cohen; Marcus Conrad; Juan R Cubillos-Ruiz; Peter E Czabotar; Vincenzo D'Angiolella; Ted M Dawson; Valina L Dawson; Vincenzo De Laurenzi; Ruggero De Maria; Klaus-Michael Debatin; Ralph J DeBerardinis; Mohanish Deshmukh; Nicola Di Daniele; Francesco Di Virgilio; Vishva M Dixit; Scott J Dixon; Colin S Duckett; Brian D Dynlacht; Wafik S El-Deiry; John W Elrod; Gian Maria Fimia; Simone Fulda; Ana J García-Sáez; Abhishek D Garg; Carmen Garrido; Evripidis Gavathiotis; Pierre Golstein; Eyal Gottlieb; Douglas R Green; Lloyd A Greene; Hinrich Gronemeyer; Atan Gross; Gyorgy Hajnoczky; J Marie Hardwick; Isaac S Harris; Michael O Hengartner; Claudio Hetz; Hidenori Ichijo; Marja Jäättelä; Bertrand Joseph; Philipp J Jost; Philippe P Juin; William J Kaiser; Michael Karin; Thomas Kaufmann; Oliver Kepp; Adi Kimchi; Richard N Kitsis; Daniel J Klionsky; Richard A Knight; Sharad Kumar; Sam W Lee; John J Lemasters; Beth Levine; Andreas Linkermann; Stuart A Lipton; Richard A Lockshin; Carlos López-Otín; Scott W Lowe; Tom Luedde; Enrico Lugli; Marion MacFarlane; Frank Madeo; Michal Malewicz; Walter Malorni; Gwenola Manic; Jean-Christophe Marine; Seamus J Martin; Jean-Claude Martinou; Jan Paul Medema; Patrick Mehlen; Pascal Meier; Sonia Melino; Edward A Miao; Jeffery D Molkentin; Ute M Moll; Cristina Muñoz-Pinedo; Shigekazu Nagata; Gabriel Nuñez; Andrew Oberst; Moshe Oren; Michael Overholtzer; Michele Pagano; Theocharis Panaretakis; Manolis Pasparakis; Josef M Penninger; David M Pereira; Shazib Pervaiz; Marcus E Peter; Mauro Piacentini; Paolo Pinton; Jochen H M Prehn; Hamsa Puthalakath; Gabriel A Rabinovich; Markus Rehm; Rosario Rizzuto; Cecilia M P Rodrigues; David C Rubinsztein; Thomas Rudel; Kevin M Ryan; Emre Sayan; Luca Scorrano; Feng Shao; Yufang Shi; John Silke; Hans-Uwe Simon; Antonella Sistigu; Brent R Stockwell; Andreas Strasser; Gyorgy Szabadkai; Stephen W G Tait; Daolin Tang; Nektarios Tavernarakis; Andrew Thorburn; Yoshihide Tsujimoto; Boris Turk; Tom Vanden Berghe; Peter Vandenabeele; Matthew G Vander Heiden; Andreas Villunger; Herbert W Virgin; Karen H Vousden; Domagoj Vucic; Erwin F Wagner; Henning Walczak; David Wallach; Ying Wang; James A Wells; Will Wood; Junying Yuan; Zahra Zakeri; Boris Zhivotovsky; Laurence Zitvogel; Gerry Melino; Guido Kroemer
Journal:  Cell Death Differ       Date:  2018-01-23       Impact factor: 12.067

Review 8.  Evolution of caspase-mediated cell death and differentiation: twins separated at birth.

Authors:  Ryan A V Bell; Lynn A Megeney
Journal:  Cell Death Differ       Date:  2017-03-24       Impact factor: 15.828

9.  Hepatoprotective effect of methyl ferulic acid against carbon tetrachloride-induced acute liver injury in rats.

Authors:  Chengfang Yang; Li Li; Zuheng Ma; Yujuan Zhong; Wenxiao Pang; Meili Xiong; Shuping Fang; Yongwen Li
Journal:  Exp Ther Med       Date:  2017-12-27       Impact factor: 2.447

10.  Bufalin induced apoptosis in SCC‑4 human tongue cancer cells by decreasing Bcl‑2 and increasing Bax expression via the mitochondria‑dependent pathway.

Authors:  Han-Yu Chou; Fu-Shin Chueh; Yi-Shih Ma; Rick Sai-Chuen Wu; Ching-Lung Liao; Yung-Lin Chu; Ming-Jen Fan; Wen-Wen Huang; Jing-Gung Chung
Journal:  Mol Med Rep       Date:  2017-09-28       Impact factor: 2.952

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