| Literature DB >> 27402448 |
Yusuke Nakamichi1,2, Sayoko Oiki1, Bunzo Mikami3, Kousaku Murata1,4, Wataru Hashimoto5.
Abstract
Bacterial unsaturated glucuronyl hydrolase (UGL) degrades unsaturated disaccharides generated from mammalian extracellular matrices, glycosaminoglycans, by polysaccharide lyases. Two Asp residues, Asp-115 and Asp-175 of Streptococcus agalactiae UGL (SagUGL), are completely conserved in other bacterial UGLs, one of which (Asp-175 of SagUGL) acts as a general acid and base catalyst. The other Asp (Asp-115 of SagUGL) also affects the enzyme activity, although its role in the enzyme reaction has not been well understood. Here, we show substitution of Asp-115 in SagUGL with Asn caused a conformational change in the active site. Tertiary structures of SagUGL mutants D115N and D115N/K370S with negligible enzyme activity were determined at 2.00 and 1.79 Å resolution, respectively, by X-ray crystallography. The side chain of Asn-115 is drastically shifted in both mutants owing to the interaction with several residues, including Asp-175, by formation of hydrogen bonds. This interaction between Asn-115 and Asp-175 probably prevents the mutants from triggering the enzyme reaction using Asp-175 as an acid catalyst.Entities:
Keywords: Glycosaminoglycan; Streptococcus; Unsaturated glucuronyl hydrolase; X-ray crystallography
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Year: 2016 PMID: 27402448 DOI: 10.1007/s10930-016-9673-y
Source DB: PubMed Journal: Protein J ISSN: 1572-3887 Impact factor: 2.371