Literature DB >> 27397795

Complete genome sequence of bacteriophage P2559Y, a marine phage that infects Croceibacter atlanticus HTCC2559.

Ilnam Kang1, Dongmin Kang1, Jang-Cheon Cho2.   

Abstract

The genus Croceibacter of the family Flavobacteriaceae represents a ubiquitous component of marine bacterioplankton, and is known to be involved in the interaction with phytoplankton. Here, we report the isolation and genome sequencing of a lytic siphovirus P2559Y that infects Croceibacter atlanticus HTCC2559, the type strain of the genus Croceibacter. The complete genome of P2559Y was 43,153bp in length, with a GC content of 38.9%. Functional annotation of 51 genes predicted in the genome showed that the P2559Y genome had a modular architecture. Comparison to the genome of P2559S, another phage that infects the same host strain, revealed an interesting feature in the genetic diversity of phages infecting the genus Croceibacter. The two phage genomes had a synteny in the structure module and shared many structural genes, while little similarity was found in the DNA replication/metabolism module.
Copyright © 2016 Elsevier B.V. All rights reserved.

Entities:  

Keywords:  Flavobacteriaceae; Genome sequencing; Marine phage; Siphoviridae

Mesh:

Year:  2016        PMID: 27397795     DOI: 10.1016/j.margen.2016.07.001

Source DB:  PubMed          Journal:  Mar Genomics        ISSN: 1874-7787            Impact factor:   1.710


  5 in total

1.  Complete genomic sequence of bacteriophage P23: a novel Vibrio phage isolated from the Yellow Sea, China.

Authors:  Yundan Liu; Lei Zhao; Min Wang; Qi Wang; Xinran Zhang; Yuye Han; Meiwen Wang; Tong Jiang; Hongbing Shao; Yong Jiang; Andrew McMinn
Journal:  Virus Genes       Date:  2019-08-16       Impact factor: 2.332

2.  Toward Understanding Phage:Host Interactions in the Rumen; Complete Genome Sequences of Lytic Phages Infecting Rumen Bacteria.

Authors:  Rosalind A Gilbert; William J Kelly; Eric Altermann; Sinead C Leahy; Catherine Minchin; Diane Ouwerkerk; Athol V Klieve
Journal:  Front Microbiol       Date:  2017-12-05       Impact factor: 5.640

3.  Metavirome Sequencing of the Termite Gut Reveals the Presence of an Unexplored Bacteriophage Community.

Authors:  Chinmay V Tikhe; Claudia Husseneder
Journal:  Front Microbiol       Date:  2018-01-04       Impact factor: 5.640

4.  Genome Analysis of Two Novel Synechococcus Phages That Lack Common Auxiliary Metabolic Genes: Possible Reasons and Ecological Insights by Comparative Analysis of Cyanomyoviruses.

Authors:  Tong Jiang; Cui Guo; Min Wang; Meiwen Wang; Xinran Zhang; Yundan Liu; Yantao Liang; Yong Jiang; Hui He; Hongbing Shao; Andrew McMinn
Journal:  Viruses       Date:  2020-07-25       Impact factor: 5.048

5.  In silico Prediction of Virus-Host Interactions for Marine Bacteroidetes With the Use of Metagenome-Assembled Genomes.

Authors:  Kento Tominaga; Daichi Morimoto; Yosuke Nishimura; Hiroyuki Ogata; Takashi Yoshida
Journal:  Front Microbiol       Date:  2020-04-28       Impact factor: 5.640

  5 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.