Literature DB >> 27396732

Discovery of New Anti-Schistosomal Hits by Integration of QSAR-Based Virtual Screening and High Content Screening.

Bruno J Neves1, Rafael F Dantas2, Mario R Senger2, Cleber C Melo-Filho1, Walter C G Valente2, Ana C M de Almeida2, João M Rezende-Neto2, Elid F C Lima2, Ross Paveley3, Nicholas Furnham3, Eugene Muratov4, Lee Kamentsky5, Anne E Carpenter5, Rodolpho C Braga1, Floriano P Silva-Junior2, Carolina Horta Andrade1.   

Abstract

Schistosomiasis is a debilitating neglected tropical disease, caused by flatworms of Schistosoma genus. The treatment relies on a single drug, praziquantel (PZQ), making the discovery of new compounds extremely urgent. In this work, we integrated QSAR-based virtual screening (VS) of Schistosoma mansoni thioredoxin glutathione reductase (SmTGR) inhibitors and high content screening (HCS) aiming to discover new antischistosomal agents. Initially, binary QSAR models for inhibition of SmTGR were developed and validated using the Organization for Economic Co-operation and Development (OECD) guidance. Using these models, we prioritized 29 compounds for further testing in two HCS platforms based on image analysis of assay plates. Among them, 2-[2-(3-methyl-4-nitro-5-isoxazolyl)vinyl]pyridine and 2-(benzylsulfonyl)-1,3-benzothiazole, two compounds representing new chemical scaffolds have activity against schistosomula and adult worms at low micromolar concentrations and therefore represent promising antischistosomal hits for further hit-to-lead optimization.

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Year:  2016        PMID: 27396732      PMCID: PMC5844225          DOI: 10.1021/acs.jmedchem.5b02038

Source DB:  PubMed          Journal:  J Med Chem        ISSN: 0022-2623            Impact factor:   7.446


  82 in total

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Authors:  A R TIMMS; E BUEDING
Journal:  Br J Pharmacol Chemother       Date:  1959-03

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Authors:  Jonathan B Baell; Georgina A Holloway
Journal:  J Med Chem       Date:  2010-04-08       Impact factor: 7.446

3.  Schistosoma mansoni: levels of antioxidants and resistance to oxidants increase during development.

Authors:  B Nare; J M Smith; R K Prichard
Journal:  Exp Parasitol       Date:  1990-05       Impact factor: 2.011

Review 4.  Automated imaging and other developments in whole-organism anthelmintic screening.

Authors:  R A Paveley; Q D Bickle
Journal:  Parasite Immunol       Date:  2013 Sep-Oct       Impact factor: 2.280

Review 5.  Virtual screening strategies in medicinal chemistry: the state of the art and current challenges.

Authors:  Rodolpho C Braga; Vinicius M Alves; Arthur C Silva; Marilia N Nascimento; Flavia C Silva; Luciano M Liao; Carolina H Andrade
Journal:  Curr Top Med Chem       Date:  2014       Impact factor: 3.295

6.  KNIME Workflow to Assess PAINS Filters in SMARTS Format. Comparison of RDKit and Indigo Cheminformatics Libraries.

Authors:  Simon Saubern; Rajarshi Guha; Jonathan B Baell
Journal:  Mol Inform       Date:  2011-08-04       Impact factor: 3.353

7.  Whole-genome sequence of Schistosoma haematobium.

Authors:  Neil D Young; Aaron R Jex; Bo Li; Shiping Liu; Linfeng Yang; Zijun Xiong; Yingrui Li; Cinzia Cantacessi; Ross S Hall; Xun Xu; Fangyuan Chen; Xuan Wu; Adhemar Zerlotini; Guilherme Oliveira; Andreas Hofmann; Guojie Zhang; Xiaodong Fang; Yi Kang; Bronwyn E Campbell; Alex Loukas; Shoba Ranganathan; David Rollinson; Gabriel Rinaldi; Paul J Brindley; Huanming Yang; Jun Wang; Jian Wang; Robin B Gasser
Journal:  Nat Genet       Date:  2012-01-15       Impact factor: 38.330

8.  Platyhelminth mitochondrial and cytosolic redox homeostasis is controlled by a single thioredoxin glutathione reductase and dependent on selenium and glutathione.

Authors:  Mariana Bonilla; Ana Denicola; Sergey V Novoselov; Anton A Turanov; Anna Protasio; Darwin Izmendi; Vadim N Gladyshev; Gustavo Salinas
Journal:  J Biol Chem       Date:  2008-04-11       Impact factor: 5.157

Review 9.  Modern approaches to accelerate discovery of new antischistosomal drugs.

Authors:  Bruno Junior Neves; Eugene Muratov; Renato Beilner Machado; Carolina Horta Andrade; Pedro Vitor Lemos Cravo
Journal:  Expert Opin Drug Discov       Date:  2016-05-03       Impact factor: 6.098

10.  Colloidal aggregation affects the efficacy of anticancer drugs in cell culture.

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Journal:  ACS Chem Biol       Date:  2012-06-08       Impact factor: 5.100

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  22 in total

1.  2D-SAR and 3D-QSAR analyses for acetylcholinesterase inhibitors.

Authors:  Bing Niu; Manman Zhao; Qiang Su; Mengying Zhang; Wei Lv; Qin Chen; Fuxue Chen; Dechang Chu; Dongshu Du; Yuhui Zhang
Journal:  Mol Divers       Date:  2017-03-09       Impact factor: 2.943

2.  Multi-Descriptor Read Across (MuDRA): A Simple and Transparent Approach for Developing Accurate Quantitative Structure-Activity Relationship Models.

Authors:  Vinicius M Alves; Alexander Golbraikh; Stephen J Capuzzi; Kammy Liu; Wai In Lam; Daniel Robert Korn; Diane Pozefsky; Carolina Horta Andrade; Eugene N Muratov; Alexander Tropsha
Journal:  J Chem Inf Model       Date:  2018-06-13       Impact factor: 4.956

3.  QSAR-driven design, synthesis and discovery of potent chalcone derivatives with antitubercular activity.

Authors:  Marcelo N Gomes; Rodolpho C Braga; Edyta M Grzelak; Bruno J Neves; Eugene Muratov; Rui Ma; Larry L Klein; Sanghyun Cho; Guilherme R Oliveira; Scott G Franzblau; Carolina Horta Andrade
Journal:  Eur J Med Chem       Date:  2017-05-10       Impact factor: 6.514

Review 4.  Chemotherapy for human schistosomiasis: how far have we come? What's new? Where do we go from here?

Authors:  Godwin Akpeko Dziwornu; Henrietta Dede Attram; Samuel Gachuhi; Kelly Chibale
Journal:  RSC Med Chem       Date:  2020-04-06

5.  Molecular insights on ABL kinase activation using tree-based machine learning models and molecular docking.

Authors:  Philipe Oliveira Fernandes; Diego Magno Martins; Aline de Souza Bozzi; João Paulo A Martins; Adolfo Henrique de Moraes; Vinícius Gonçalves Maltarollo
Journal:  Mol Divers       Date:  2021-06-30       Impact factor: 3.364

6.  Phantom PAINS: Problems with the Utility of Alerts for Pan-Assay INterference CompoundS.

Authors:  Stephen J Capuzzi; Eugene N Muratov; Alexander Tropsha
Journal:  J Chem Inf Model       Date:  2017-02-25       Impact factor: 4.956

Review 7.  Transfer and Multi-task Learning in QSAR Modeling: Advances and Challenges.

Authors:  Rodolfo S Simões; Vinicius G Maltarollo; Patricia R Oliveira; Kathia M Honorio
Journal:  Front Pharmacol       Date:  2018-02-06       Impact factor: 5.810

Review 8.  Prediction of antischistosomal small molecules using machine learning in the era of big data.

Authors:  Samuel K Kwofie; Kwasi Agyenkwa-Mawuli; Emmanuel Broni; Whelton A Miller Iii; Michael D Wilson
Journal:  Mol Divers       Date:  2021-08-05       Impact factor: 2.943

Review 9.  Schistosomiasis Drug Discovery in the Era of Automation and Artificial Intelligence.

Authors:  José T Moreira-Filho; Arthur C Silva; Rafael F Dantas; Barbara F Gomes; Lauro R Souza Neto; Jose Brandao-Neto; Raymond J Owens; Nicholas Furnham; Bruno J Neves; Floriano P Silva-Junior; Carolina H Andrade
Journal:  Front Immunol       Date:  2021-05-31       Impact factor: 7.561

10.  Development of Machine Learning Models and the Discovery of a New Antiviral Compound against Yellow Fever Virus.

Authors:  Victor O Gawriljuk; Daniel H Foil; Ana C Puhl; Kimberley M Zorn; Thomas R Lane; Olga Riabova; Vadim Makarov; Andre S Godoy; Glaucius Oliva; Sean Ekins
Journal:  J Chem Inf Model       Date:  2021-07-21       Impact factor: 6.162

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