Literature DB >> 27358398

Upstream Open Reading Frames Differentially Regulate Gene-specific Translation in the Integrated Stress Response.

Sara K Young1, Ronald C Wek2.   

Abstract

Translation regulation largely occurs during initiation, which features ribosome assembly onto mRNAs and selection of the translation start site. Short, upstream ORFs (uORFs) located in the 5'-leader of the mRNA can be selected for translation. Multiple transcripts associated with stress amelioration are preferentially translated through uORF-mediated mechanisms during activation of the integrated stress response (ISR) in which phosphorylation of the α subunit of eIF2 results in a coincident global reduction in translation initiation. This review presents key features of uORFs that serve to optimize translational control that is essential for regulation of cell fate in response to environmental stresses.
© 2016 by The American Society for Biochemistry and Molecular Biology, Inc.

Entities:  

Keywords:  eukaryotic translation initiation; stress response; translation; translation control; translation regulation

Mesh:

Substances:

Year:  2016        PMID: 27358398      PMCID: PMC5016099          DOI: 10.1074/jbc.R116.733899

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  91 in total

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Authors:  Lawrence B Gardner
Journal:  Mol Cell Biol       Date:  2008-03-24       Impact factor: 4.272

2.  Multiple upstream AUG codons mediate translational control of GCN4.

Authors:  P P Mueller; A G Hinnebusch
Journal:  Cell       Date:  1986-04-25       Impact factor: 41.582

3.  Stress responses. Mutations in a translation initiation factor identify the target of a memory-enhancing compound.

Authors:  Yusuke Sekine; Alisa Zyryanova; Ana Crespillo-Casado; Peter M Fischer; Heather P Harding; David Ron
Journal:  Science       Date:  2015-04-09       Impact factor: 47.728

4.  Effect of sequence context at stop codons on efficiency of reinitiation in GCN4 translational control.

Authors:  C M Grant; A G Hinnebusch
Journal:  Mol Cell Biol       Date:  1994-01       Impact factor: 4.272

5.  The catalytic mechanism of guanine nucleotide exchange factor action and competitive inhibition by phosphorylated eukaryotic initiation factor 2.

Authors:  A G Rowlands; R Panniers; E C Henshaw
Journal:  J Biol Chem       Date:  1988-04-25       Impact factor: 5.157

6.  Polyamine regulation of ribosome pausing at the upstream open reading frame of S-adenosylmethionine decarboxylase.

Authors:  G L Law; A Raney; C Heusner; D R Morris
Journal:  J Biol Chem       Date:  2001-08-06       Impact factor: 5.157

Review 7.  The C/EBP family of transcription factors: a paradigm for interaction between gene expression and proliferation control.

Authors:  Claus Nerlov
Journal:  Trends Cell Biol       Date:  2007-07-19       Impact factor: 20.808

8.  Genome-wide analysis in vivo of translation with nucleotide resolution using ribosome profiling.

Authors:  Nicholas T Ingolia; Sina Ghaemmaghami; John R S Newman; Jonathan S Weissman
Journal:  Science       Date:  2009-02-12       Impact factor: 47.728

9.  Coordinate regulation of eIF2α phosphorylation by PPP1R15 and GCN2 is required during Drosophila development.

Authors:  Elke Malzer; Malgorzata Szajewska-Skuta; Lucy E Dalton; Sally E Thomas; Nan Hu; Helen Skaer; David A Lomas; Damian C Crowther; Stefan J Marciniak
Journal:  J Cell Sci       Date:  2013-02-15       Impact factor: 5.285

10.  Quantitative profiling of initiating ribosomes in vivo.

Authors:  Xiangwei Gao; Ji Wan; Botao Liu; Ming Ma; Ben Shen; Shu-Bing Qian
Journal:  Nat Methods       Date:  2014-12-08       Impact factor: 28.547

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  122 in total

1.  Gcn2 eIF2α kinase mediates combinatorial translational regulation through nucleotide motifs and uORFs in target mRNAs.

Authors:  Yuji Chikashige; Hiroaki Kato; Mackenzie Thornton; Whitney Pepper; Madelyn Hilgers; Ariana Cecil; Izumi Asano; Haana Yamada; Chie Mori; Cheyenne Brunkow; Carter Moravek; Takeshi Urano; Chingakham Ranjit Singh; Katsura Asano
Journal:  Nucleic Acids Res       Date:  2020-09-18       Impact factor: 16.971

2.  Myt Transcription Factors Prevent Stress-Response Gene Overactivation to Enable Postnatal Pancreatic β Cell Proliferation, Function, and Survival.

Authors:  Ruiying Hu; Emily Walker; Chen Huang; Yanwen Xu; Chen Weng; Gillian E Erickson; Anastasia Coldren; Xiaodun Yang; Marcela Brissova; Irina Kaverina; Appakalai N Balamurugan; Christopher V E Wright; Yan Li; Roland Stein; Guoqiang Gu
Journal:  Dev Cell       Date:  2020-04-30       Impact factor: 12.270

3.  The eIF2α Kinase Heme-Regulated Inhibitor Protects the Host from Infection by Regulating Intracellular Pathogen Trafficking.

Authors:  Wael Bahnan; Justin C Boucher; Petoria Gayle; Niraj Shrestha; Mark Rosen; Bertal Aktas; Becky Adkins; Arba Ager; Wasif N Khan; Kurt Schesser
Journal:  Infect Immun       Date:  2018-02-20       Impact factor: 3.441

Review 4.  Translational Control during Cellular Senescence.

Authors:  Matthew J Payea; Carlos Anerillas; Ravi Tharakan; Myriam Gorospe
Journal:  Mol Cell Biol       Date:  2021-01-25       Impact factor: 4.272

Review 5.  uORF-mediated translational control: recently elucidated mechanisms and implications in cancer.

Authors:  Hung-Hsi Chen; Woan-Yuh Tarn
Journal:  RNA Biol       Date:  2019-06-24       Impact factor: 4.652

Review 6.  New pathologic mechanisms in nucleotide repeat expansion disorders.

Authors:  C M Rodriguez; P K Todd
Journal:  Neurobiol Dis       Date:  2019-06-21       Impact factor: 5.996

Review 7.  Translational Control in Cancer.

Authors:  Nathaniel Robichaud; Nahum Sonenberg; Davide Ruggero; Robert J Schneider
Journal:  Cold Spring Harb Perspect Biol       Date:  2019-07-01       Impact factor: 10.005

8.  An Evolutionarily Conserved uORF Regulates PGC1α and Oxidative Metabolism in Mice, Flies, and Bluefin Tuna.

Authors:  Phillip A Dumesic; Daniel F Egan; Philipp Gut; Mei T Tran; Alice Parisi; Nirmalya Chatterjee; Mark Jedrychowski; Margherita Paschini; Lawrence Kazak; Sarah E Wilensky; Florence Dou; Dina Bogoslavski; Jeffrey A Cartier; Norbert Perrimon; Shingo Kajimura; Samir M Parikh; Bruce M Spiegelman
Journal:  Cell Metab       Date:  2019-05-16       Impact factor: 27.287

Review 9.  Small open reading frames and cellular stress responses.

Authors:  Alexandra Khitun; Travis J Ness; Sarah A Slavoff
Journal:  Mol Omics       Date:  2019-02-27

10.  Reprogramming of translation in yeast cells impaired for ribosome recycling favors short, efficiently translated mRNAs.

Authors:  Swati Gaikwad; Fardin Ghobakhlou; David J Young; Jyothsna Visweswaraiah; Hongen Zhang; Alan G Hinnebusch
Journal:  Elife       Date:  2021-03-25       Impact factor: 8.140

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