| Literature DB >> 27357958 |
Rachida Tahar1,2,3, Catarina Albergaria4,5, Neil Zeghidour6, Vincent Foumane Ngane7, Leonardo K Basco7,8, Christian Roussilhon4.
Abstract
BACKGROUND: Plasmodium falciparum infection can lead to several clinical manifestations ranging from asymptomatic infections (AM) and uncomplicated malaria (UM) to potentially fatal severe malaria (SM), including cerebral malaria (CM). Factors implicated in the progression towards severe disease are not fully understood.Entities:
Keywords: Biomarkers; Fractalkine; Neopterin; Plasmodium falciparum; cerebral malaria; sCD14; sCD163; sTREM-1; suPAR
Mesh:
Substances:
Year: 2016 PMID: 27357958 PMCID: PMC4928328 DOI: 10.1186/s12936-016-1378-3
Source DB: PubMed Journal: Malar J ISSN: 1475-2875 Impact factor: 2.979
Median concentrations with 25 and 75 % quartiles indicated for blood parasitaemia and eight soluble markers quantified in the plasma of children with different clinical conditions
| Mean ages (in years) | Parasitaemia | Neopterin (ng/ml) | SCD163 (ng/ml) | suPAR (ng/ml) | PTX3 (ng/ml) | sCD14 (ng/ml) | Fractalkine (pg/ml) | sTREM-1 (ng/ml) | MIG (ng/ml) | |
|---|---|---|---|---|---|---|---|---|---|---|
| CTS | 0 | 1.93 [1.23–2.61] | 236.6 [149.9–327.7] | 3.95 [3.26–5.40] | 3.21 [2.17–9.37] | 2173 [1355–2945] | 77.8 [65.5–111.0] | 0.45 [0.27–50.2] | 1.11 [0.59–1.53] | |
| 80 AM | 6.3 ± 1.1 | 765 [58–1614] | 3.99 [2.68–4.35] | 514.2 [369.30–810.5] | 3.72 [3.36–4.35] | 0.26 [0.18–1.98] | 4245 [2888–6820] | 145.8 [109.4–158.0] | 0.27 [0.26–0.29] | 1.52 [1.41–1.60] |
| 69 UM | 2.9 ± 1.7 | 58,322 [20,656–113,071] | 2.56 [2.15–2.98] | 529.4 [371.5–910.4] | 6.56 [5.58–7.57] | 22.92 [8.68–47.40] | 11,666 [6918–17,810] | 104.3 [93.2–135.2] | 0.32 [0.29–0.37] | 1.49 [1.40–1.60] |
| 39 UM + 28D | 3.1 ± 1.3 | 0 | 2.47 [1.10–2.96] | 228.5 [185.3–287.3] | 6.45 [5.51–7.09] | 3.95 [2.12–7.58] | 1182 [909–1558] | 21.7 [17.6–24.2] | 0.39 [0.35–0.45) | 0.61 [0.40–0.92] |
| 41 SM | 3.0 ± 3.1 | 14,008 [2317–97,928] | 8.63 [8.30–9.03] | 385.5 [284.6–503.5] | 7.85 [6.07–9.36] | 13.69 [5.27–25.27] | 2970 [2079–6715] | 15.3 [14.4–16.0] | 0.52 [0.47–0.60] | 1.81 [0.78–3.03] |
| 25 CM | 2.4 ± 2.8 | 100,001 [2062–201,952] | 8.20 [7.69–8.83] | 360.6 [252.7–470.9] | 7.98 [6.93–11.69] | 22.20 [8.04–35.12] | 1998 [1444–3266] | 15.6 [15.0–16.8] | 0.50 [0.44–0.58] | 2.37 [1.18–3.39] |
Correlations between the plasma concentrations of the eight different soluble mediators
| sCD14 | sCD163 | Fractalkine | Neopterin | sTREM-1 | MIG | suPAR | PTX3 | |
|---|---|---|---|---|---|---|---|---|
| sCD14 | 1 | |||||||
| sCD163 | 0.147 | 1 | ||||||
| Fractalkine | 0.272 | 0.208 | 1 | |||||
| Neopterin | −0.094 | −0.024 | −0.420 | 1 | ||||
| sTREM-1 | 0.035 | 0.068 | −0.310 | 0.642 | 1 | |||
| MIG | 0.048 | 0.118 | −0.026 | 0.435 | 0.401 | 1 | ||
| suPAR | 0.043 | 0.122 | −0.463 | 0.379 | 0.448 | 0 234 | 1 | |
| PTX3 | 0.192 | 0.125 | −0.019 | 0.168 | 0.368 | 0.246 | 0.354 | 1 |
Correlations were estimated by the restricted maximum likelihood (REML) method using JMP®
Fig. 1Fold changes in the plasma levels of eight biomarkers illustrating similar trends between various pairs of biomarkers in distinct clinical malaria conditions. Results of fold changes in the plasma quantification of each biomarker are indicated as median values for each clinical condition
Fig. 2Patterns of plasma level fold changes observed for each biomarker in different malaria clinical conditions
Fig. 3Result of clustering analysis. A hierarchical classification obtained by Ward method is illustrated as a dendrogram, and indications of distance between clusters are as follows: ACT (controls)- UM + 28 = 1.11; ACT-AM = 2.351; ACT-UM = 3.452; ACT-SM = 4.517; SM–CM = 0.961
Assessment by ROC curve analyses of the individual prediction performance of each of the eight plasma proteins to differentiate between clinical malaria conditions
| Test result variables | AUROCC ± Std error | Asymptomatic 95 % lower bound | Asymptomatic 95 % upper bound |
|---|---|---|---|
| A | |||
| Fractalkine | 0.985 ± 0.015 | 0.956 | 1.000 |
| sCD163 | 0.959 ± 0.019 | 0.922 | 0.996 |
| Neopterin | 0.857 ± 0.050 | 0.760 | 0.954 |
| sCD14 | 0.842 ± 0.049 | 0.745 | 0.939 |
| MIG | 0.788 ± 0.062 | 0.666 | 0.910 |
| sTREM-1 | 0.605 ± 0.081 | 0.446 | 0.764 |
| suPAR | 0.485 ± 0.075 | 0.337 | 0.632 |
| Pentraxin | 0.233 ± 0.05 | 0.135 | 0.331 |
| B | |||
| Pentraxin | 0.979 ± 0.010 | 0.958 | 0.999 |
| suPAR | 0.958 ± 0.018 | 0.922 | 0.994 |
| sCD14 | 0.876 ± 0.030 | 0.817 | 0.936 |
| sTREM-1 | 0.832 ± 0.037 | 0.759 | 0.905 |
| sCD163 | 0.499 ± 0.053 | 0.395 | 0.602 |
| MIG | 0.490 ± 0.053 | 0.387 | 0.593 |
| Fractalkine | 0.314 ± 0.049 | 0.218 | 0.410 |
| Neopterin | 0.246 ± 0.049 | 0.149 | 0.343 |
| C | |||
| Neopterin | 1.000 ± 0.000 | 1.000 | 0.000 |
| sTREM-1 | 0.957 ± 0.019 | 0.919 | 0.994 |
| suPAR | 0.678 ± 0.053 | 0.575 | 0.782 |
| MIG | 0.566 ± 0.069 | 0.431 | 0.702 |
| Pentraxin | 0.401 ± 0.053 | 0.297 | 0.504 |
| sCD163 | 0.308 ± 0.049 | 0.213 | 0.404 |
| sCD14 | 0.100 ± 0.027 | 0.047 | 0.154 |
| Fractalkine | 0.000 ± 0.000 | 0.000 | 0.000 |
Plasma levels of eight proteins were quantified in 80 AM children, 69 UM patients and 66 SM or CM patients. Receiver operator characteristics (ROC) curves were used to estimate the power of each of the eight mediators to individually distinguish between two distinct clinical malaria conditions. Results of ROC curve analyses are indicated for AM children versus Controls (A), UM patients versus AM children (B) and SM–CM versus UM patients (C)
Assessment by principal component analyses of the association between eight plasma proteins and clinical malaria condition
| Factor 1 | Factor 2 | Eigenvalues | Proportion (%) | Cumulative % | |
|---|---|---|---|---|---|
| A | |||||
| Fractalkine | 0.85545 | −0.11784 | 3.3656 | 42.070 | 42.070 |
| MIG | 0.73788 | 0.39620 | 1.1835 | 14.793 | 56.863 |
| Neopterin | 0.70432 | −0.43758 | 1.0940 | 13.676 | 70.539 |
| CD14 | 0.62246 | −0.25274 | 0.7673 | 9.592 | 80.130 |
| sTREM-1 | 0.56695 | 0.61686 | 0.6733 | 8.417 | 88.547 |
| CD163 | 0.53826 | 0.23644 | 0.4064 | 5.080 | 93.627 |
| suPAR | 0.10568 | 0.46070 | 0.3428 | 4.286 | 97.913 |
| PTX3 | −0.76387 | 0.32950 | 0.1670 | 2.087 | 100.000 |
| B | |||||
| suPAR | 0.88028 | 0.03387 | 2.5280 | 31.600 | 31.600 |
| PTX3 | 0.76330 | −0.15305 | 1.2911 | 16.139 | 47.738 |
| sTREM-1 | 0.74615 | −0.13346 | 1.1018 | 13.773 | 61.511 |
| sCD14 | 0.34031 | −0.46342 | 0.8155 | 10.193 | 71.705 |
| sCD163 | 0.32028 | 0.63252 | 0.7944 | 9.930 | 81.635 |
| MIG | 0.06559 | 0.44941 | 0.6824 | 8.529 | 90.165 |
| Neopterin | −0.43095 | 0.33440 | 0.4736 | 5.920 | 96.085 |
| Fractalkine | −0.45310 | −0.56576 | 0.3132 | 3.915 | 100.000 |
| C | |||||
| Neopterin | 0.93285 | −0.17805 | 3.1726 | 39.658 | 39.658 |
| sTREM-1 | 0.76040 | 0.18134 | 1.2971 | 16.214 | 55.871 |
| suPAR | 0.57427 | 0.57156 | 0.9591 | 11.988 | 67.860 |
| MIG/CXCL9 | 0.48202 | 0.36299 | 0.8547 | 10.684 | 78.544 |
| PTX3 | −0.14160 | 0.69833 | 0.7624 | 9.530 | 88.074 |
| sCD163 | −0.29783 | 0.47885 | 0.5191 | 6.489 | 94.563 |
| sCD14 | −0.47978 | 0.17089 | 0.3726 | 4.658 | 99.221 |
| Fractalkine | −0.90726 | 0.16699 | 0.0623 | 0.779 | 100.000 |
The main associations found between biomarkers and clinical outcomes using rescaled variables for PCA analyses are indicated and sorted out for each clinical malaria condition
The combination of Fractalkine, MIG/CXCL9 and neopterin was the best predictor of AM condition (A). The combination of suPAR, PTX3 and sTREM-1 was the best indicator of the UM condition (B) whereas that of neopterin, suPAR and Fractalkine was strongly predictive of SM–CM conditions (C)
In each Table, two columns (Factor 1 and 2) indicate the correlation coefficients determined between each vector and the main component. Eight values are associated with vectors and the proportion (%) reflects how much of the variance is explained by each vector. The last column indicates the cumulative percentage of the variance explained by the different vectors sorted out by decreasing order of the corresponding eigenvalues
Fig. 4Biplots illustrating the main results of PCA analyses. a Shows that all SM and CM patients are grouped on the right part of the biplot whereas uncomplicated clinical conditions, i.e. patients with less severe syndromes, are located on the upper left part of the biplot. Conditions of asymptomatic carriage, i.e. situations without clinical expression of the disease, are found in the lower left quarter of the graph of scores. The combination of Fractalkine, MIG/CXCL9 and neopterin was the best predictor of AM condition versus that of controls (b). The combination of suPAR, PTX3 and sTREM-1 was the best indicator of the UM condition versus AM syndrome (c) whereas that of neopterin, suPAR and Fractalkine was strongly predictive of SM–CM compared to UM condition (d)