Literature DB >> 27357428

Target resequencing of neuromuscular disease-related genes using next-generation sequencing for patients with undiagnosed early-onset neuromuscular disorders.

Yuri Kitamura1,2, Eri Kondo2,3, Mari Urano2, Ryoko Aoki2, Kayoko Saito1,2.   

Abstract

Neuromuscular disorders are clinically and genetically heterogeneous diseases with broadly overlapping clinical features. Progress in molecular genetics has led to the identification of numerous causative genes for neuromuscular disorders, but Sanger sequencing-based diagnosis remains labor-intensive and expensive because the genes are large, the genotypes and phenotypes of neuromuscular disorders overlap and multiple genes related to a single phenotype exist. Recently, the advent of next-generation sequencing (NGS) has enabled efficient, concurrent examination of several related genes. Thus, we used NGS for target resequencing of neuromuscular disease-related genes from 42 patients in whom undiagnosed early-onset neuromuscular disorders. Causative genes were identified in 19/42 (45.2%) patients (six, congenital muscular dystrophy; two, Becker muscular dystrophy (BMD); three, limb-girdle muscular dystrophy; one, concurrent BMD and Fukuyama congenital muscular dystrophy; three, nemaline myopathy; one, centronuclear myopathy; one, congenital fiber-type disproportion; one, myosin storage myopathy; and one, congenital myasthenic syndrome). We detected variants of uncertain significance in two patients. In 6/19 patients who received a definitive diagnosis, the diagnosis did not require muscle biopsy. Thus, for patients with suspected neuromuscular disorders not identified using conventional genetic testing alone, NGS-based target resequencing has the potential to serve as a powerful tool that allows definitive diagnosis.

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Year:  2016        PMID: 27357428     DOI: 10.1038/jhg.2016.79

Source DB:  PubMed          Journal:  J Hum Genet        ISSN: 1434-5161            Impact factor:   3.172


  51 in total

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Authors:  Hidehito Kondo; Koichi Tanda; Chihiro Tabata; Kohei Hayashi; Minako Kihara; Zenro Kizaki; Mariko Taniguchi-Ikeda; Masato Mori; Kei Murayama; Akira Ohtake
Journal:  Brain Dev       Date:  2013-10-07       Impact factor: 1.961

2.  Utility of next generation sequencing in genetic diagnosis of early onset neuromuscular disorders.

Authors:  Jong Hee Chae; Valeria Vasta; Anna Cho; Byung Chan Lim; Qing Zhang; So Hee Eun; Si Houn Hahn
Journal:  J Med Genet       Date:  2015-01-29       Impact factor: 6.318

Review 3.  An update of the mutation spectrum of the survival motor neuron gene (SMN1) in autosomal recessive spinal muscular atrophy (SMA).

Authors:  B Wirth
Journal:  Hum Mutat       Date:  2000       Impact factor: 4.878

4.  Complete cloning of the Duchenne muscular dystrophy (DMD) cDNA and preliminary genomic organization of the DMD gene in normal and affected individuals.

Authors:  M Koenig; E P Hoffman; C J Bertelson; A P Monaco; C Feener; L M Kunkel
Journal:  Cell       Date:  1987-07-31       Impact factor: 41.582

5.  Limb-girdle muscular dystrophy: diagnostic evaluation, frequency and clues to pathogenesis.

Authors:  Harriet P Lo; Sandra T Cooper; Frances J Evesson; Jane T Seto; Maria Chiotis; Valerie Tay; Alison G Compton; Anita G Cairns; Alistair Corbett; Daniel G MacArthur; Nan Yang; Katrina Reardon; Kathryn N North
Journal:  Neuromuscul Disord       Date:  2007-09-25       Impact factor: 4.296

6.  Genotype-phenotype correlation in a large population of muscular dystrophy patients with LAMA2 mutations.

Authors:  Fatemeh Geranmayeh; Emma Clement; Lucy H Feng; Caroline Sewry; Judith Pagan; Rachael Mein; Stephen Abbs; Louise Brueton; Anne-Marie Childs; Heinz Jungbluth; Christian G De Goede; Bryan Lynch; Jean-Pierre Lin; Gabriel Chow; Carlos de Sousa; Olivia O'Mahony; Anirban Majumdar; Volker Straub; Katherine Bushby; Francesco Muntoni
Journal:  Neuromuscul Disord       Date:  2010-03-06       Impact factor: 4.296

7.  A global reference for human genetic variation.

Authors:  Adam Auton; Lisa D Brooks; Richard M Durbin; Erik P Garrison; Hyun Min Kang; Jan O Korbel; Jonathan L Marchini; Shane McCarthy; Gil A McVean; Gonçalo R Abecasis
Journal:  Nature       Date:  2015-10-01       Impact factor: 49.962

8.  Alpha-actin gene mutations and polymorphisms in Italian patients with nemaline myopathy.

Authors:  Claudio Graziano; Enrico Bertini; Carlo Minetti; Berardino Porfirio
Journal:  Int J Mol Med       Date:  2004-06       Impact factor: 4.101

9.  ISPD gene mutations are a common cause of congenital and limb-girdle muscular dystrophies.

Authors:  Sebahattin Cirak; Aileen Reghan Foley; Ralf Herrmann; Tobias Willer; Shu Yau; Elizabeth Stevens; Silvia Torelli; Lina Brodd; Alisa Kamynina; Petr Vondracek; Helen Roper; Cheryl Longman; Rudolf Korinthenberg; Gianni Marrosu; Peter Nürnberg; Daniel E Michele; Vincent Plagnol; Matt Hurles; Steven A Moore; Caroline A Sewry; Kevin P Campbell; Thomas Voit; Francesco Muntoni
Journal:  Brain       Date:  2013-01-03       Impact factor: 13.501

Review 10.  Inherited disorders of the neuromuscular junction: an update.

Authors:  Pedro M Rodríguez Cruz; Jacqueline Palace; David Beeson
Journal:  J Neurol       Date:  2014-10-11       Impact factor: 4.849

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  10 in total

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2.  An Integrated Clinical-Biological Approach to Identify Interindividual Variability and Atypical Phenotype-Genotype Correlations in Myopathies: Experience on A Cohort of 156 Families.

Authors:  Raul Juntas Morales; Aurélien Perrin; Guilhem Solé; Delphine Lacourt; Henri Pegeot; Ulrike Walther-Louvier; Pascal Cintas; Claude Cances; Caroline Espil; Corinne Theze; Reda Zenagui; Kevin Yauy; Elodie Cosset; Dimitri Renard; Valerie Rigau; Andre Maues de Paula; Emmanuelle Uro-Coste; Marie-Christine Arne-Bes; Marie-Laure Martin Négrier; Nicolas Leboucq; Blandine Acket; Edoardo Malfatti; Valérie Biancalana; Corinne Metay; Pascale Richard; John Rendu; François Rivier; Michel Koenig; Mireille Cossée
Journal:  Genes (Basel)       Date:  2021-07-31       Impact factor: 4.096

3.  Exome sequences versus sequential gene testing in the UK highly specialised Service for Limb Girdle Muscular Dystrophy.

Authors:  Elizabeth Harris; Ana Topf; Rita Barresi; Judith Hudson; Helen Powell; James Tellez; Debbie Hicks; Anna Porter; Marta Bertoli; Teresinha Evangelista; Chiara Marini-Betollo; Ólafur Magnússon; Monkol Lek; Daniel MacArthur; Kate Bushby; Hanns Lochmüller; Volker Straub
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4.  Diagnosis of cobalamin C deficiency with renal abnormality from onset in a Chinese child by next generation sequencing: A case report.

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5.  Mutational spectrum of Chinese LGMD patients by targeted next-generation sequencing.

Authors:  Meng Yu; Yiming Zheng; Suqin Jin; Qiang Gang; Qingqing Wang; Peng Yu; He Lv; Wei Zhang; Yun Yuan; Zhaoxia Wang
Journal:  PLoS One       Date:  2017-04-12       Impact factor: 3.240

6.  Targeted Next-Generation Sequencing in a Large Cohort of Genetically Undiagnosed Patients with Neuromuscular Disorders in Spain.

Authors:  Lidia Gonzalez-Quereda; Maria Jose Rodriguez; Jordi Diaz-Manera; Jorge Alonso-Perez; Eduard Gallardo; Andres Nascimento; Carlos Ortez; Daniel Natera-de Benito; Montse Olive; Laura Gonzalez-Mera; Adolfo Lopez de Munain; Miren Zulaica; Juan Jose Poza; Ivonne Jerico; Laura Torne; Pau Riera; Jose Milisenda; Aurora Sanchez; Gloria Garrabou; Isabel Llano; Marcos Madruga-Garrido; Pia Gallano
Journal:  Genes (Basel)       Date:  2020-05-11       Impact factor: 4.096

7.  An integrated approach to the evaluation of patients with asymptomatic or minimally symptomatic hyperCKemia.

Authors:  Chiara Gemelli; Monica Traverso; Lucia Trevisan; Sabrina Fabbri; Elena Scarsi; Barbara Carlini; Valeria Prada; Tiziana Mongini; Lucia Ruggiero; Serena Patrone; Salvatore Gallone; Rosa Iodice; Livia Pisciotta; Federico Zara; Paola Origone; Eugenia Rota; Carlo Minetti; Claudio Bruno; Angelo Schenone; Paola Mandich; Chiara Fiorillo; Marina Grandis
Journal:  Muscle Nerve       Date:  2021-11-08       Impact factor: 3.852

8.  Diagnostic utility of exome sequencing in the evaluation of neuromuscular disorders.

Authors:  Gloria T Haskell; Michael C Adams; Zheng Fan; Krunal Amin; Roberto J Guzman Badillo; Linran Zhou; Christopher Bizon; Nizar Chahin; Robert S Greenwood; Laura V Milko; Yael Shiloh-Malawsky; Kristy R Crooks; Natasha Strande; Michael Tennison; Christian R Tilley; Alicia Brandt; Kirk C Wilhelmsen; Karen Weck; James P Evans; Jonathan S Berg
Journal:  Neurol Genet       Date:  2018-02-01

9.  Molecular diagnosis of muscular diseases in outpatient clinics: A Canadian perspective.

Authors:  Fanny Thuriot; Elaine Gravel; Caroline Buote; Marianne Doyon; Elvy Lapointe; Lydia Marcoux; Sandrine Larue; Amélie Nadeau; Sébastien Chénier; Paula J Waters; Pierre-Étienne Jacques; Serge Gravel; Sébastien Lévesque
Journal:  Neurol Genet       Date:  2020-03-13

10.  Predominance of Dystrophinopathy Genotypes in Mexican Male Patients Presenting as Muscular Dystrophy with A Normal Multiplex Polymerase Chain Reaction DMD Gene Result: A Study Including Targeted Next-Generation Sequencing.

Authors:  Miguel Angel Alcántara-Ortigoza; Miriam Erandi Reyna-Fabián; Ariadna González-Del Angel; Bernardette Estandia-Ortega; Cesárea Bermúdez-López; Gabriela Marisol Cruz-Miranda; Matilde Ruíz-García
Journal:  Genes (Basel)       Date:  2019-10-29       Impact factor: 4.096

  10 in total

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