| Literature DB >> 27355945 |
Yang-Hua Qu1, Jun-Cai Fu2, Kun Liu3, Zhao-Yun Zuo4, Hui-Na Jia5, Yong Ma6, Hai-Ling Luo7.
Abstract
α-Tocopherol transfer protein (α-TTP) is a ~32 kDa protein expressed mainly in hepatocytes. The major function of the protein is to bind specifically to α-tocopherol and, together, the complex transfers from late lysosomes to the cell membrane. A previous study indicated that some factors might be required in the transferring process. However, there is little information available about the potential transferring factors. In addition, there remains much to learn about other physiological processes which α-TTP might participate in. Thus, in this study a human α-TTP eukaryotic expression vector was successfully constructed and expressed in human hepatoma cells (HepG2). The sensitive genes related to α-TTP were then screened by microarray technology. Results showed that expression of the vector in HepG2 cells led to the identification of 323 genes showing differential expression. The differentially expressed transcripts were divided into four main categories, including (1) cell inflammation; (2) cell cycle and cell apoptosis; (3) cell signaling and gene regulation; and (4) cellular movement. A few cellular movement related transcripts were selected and verified by quantitative real-time PCR. Expressions of some were significantly increased in α-TTP-expressed group, which indicated that these factors were likely to play a role in the transferring process.Entities:
Keywords: microarray; sensitive genes; vitamin E; α-tocopherol transfer protein
Mesh:
Substances:
Year: 2016 PMID: 27355945 PMCID: PMC4964392 DOI: 10.3390/ijms17071016
Source DB: PubMed Journal: Int J Mol Sci ISSN: 1422-0067 Impact factor: 5.923
Figure 1Expression of human α-tocopherol transfer protein (α-TTP) eukaryotic expression vector in Human Hepatoma cells (HepG2). (A) Result of quantitative real-time PCR; (B) Result of Western blot; (C) Result of Immunofluorescence (10×). pcDNA: pcDNA3.1-mycHisa empty vector; p-TTP: human α-TTP eukaryotic expression vector.
Classification of α-tocopherol transfer protein (α-TTP)-related genes.
| Classification | Genbank Accession Number | Name of Gene | Fold Change |
|---|---|---|---|
| Genes related to cell inflammation | NM_004688 | 1.70 | |
| NM_001008540 | 1.67 | ||
| NM_139266 | 1.65 | ||
| NM_002026 | 1.62 | ||
| NM_002310 | 1.58 | ||
| NM_000877 | 1.51 | ||
| NM_001065 | 1.58 | ||
| NM_001561 | −2.00 | ||
| NM_001190942 | 3.14 | ||
| Genes related to cell cycle and cell apoptosis | NM_001030055 | 1.51 | |
| NM_022873 | 2.22 | ||
| NM_001206701 | 1.74 | ||
| NM_001269 | −1.56 | ||
| NM_181558 | 1.52 | ||
| NM_005531 | 1.51 | ||
| NM_001003943 | 1.55 | ||
| NM_001257387 | 1.60 | ||
| NM_004741 | −1.54 | ||
| NM_001267058 | 1.52 | ||
| NM_001143762 | −1.73 | ||
| NM_004052 | 1.55 | ||
| NM_001813 | 1.72 | ||
| NM_016343 | 1.54 | ||
| Genes related to cell signaling and gene regulation | NM_004031 | 1.84 | |
| NM_001243084 | 1.71 | ||
| NM_198318 | −1.58 | ||
| NM_012099 | −1.72 | ||
| Genes involved in the cellular movement | NM_006364 | 1.51 | |
| NM_022147 | 3.13 | ||
| NM_004669 | 1.57 | ||
| NM_001813 | 1.72 | ||
| NM_000218 | 1.53 | ||
| NM_001172713 | 1.70 | ||
| NM_004052 | 1.55 | ||
| NM_016343 | 1.54 |
Figure 2Expression levels of α-TTP related genes. SEC23A: Sec23 homolog A; RTP4: receptor transporter protein 4; CLIC3: chloride intracellular channel 3; CENPE: centromere protein E; KCNQ1: potassium voltage-gated channel subfamily Q member 1; GOLGA4: golgi autoantigen, golgin subfamily a, 4; BNIP3: BCL2/adenovirus E1B 19 kDa interacting protein 3; CENPF: centromere protein F. Data are presented as mean ± standard error; the asterisk indicated significant difference between control and treatment group.
Figure 3mRNA co-expression in Liver Hepatocellular Carcinoma: (a) Tocopherol Transfer Protein A (TTPA) vs. Golgin subfamily a 4 (GOLGA4); (b) TTPA vs. Sec24 homolog A (SEC24 A).
Composition of the enzyme digestion reaction.
| Ingredients | Volume |
|---|---|
| DNA | ≤1 µg |
| Kpn I | 1 µL |
| Xba I | 1 µL |
| Buffer | 5 µL |
| ddH2O | X µL |
| Total | 50 µL |
Composition of the ligation reaction.
| Ingredients | Volume |
|---|---|
| Vector DNA | 5 µL |
| α-TTP DNA | 3 µL |
| Buffer | 1 µL |
| T4 ligase | 1 µL |
| Total | 10 µL |
Details of primers used for quantitative real-time PCR.
| Name of Genes | Primer Sequence | Product Size (bp) |
|---|---|---|
| F: ACAGGAGGTAGAAACTCAGCG | 104 | |
| R: TCTTCTTGGCTACGGATGGA | ||
| F: CTCACCGAGCGCGGCTACAG | 126 | |
| R: GGAGCTGGAAGCAGCCGTGG |