| Literature DB >> 27352268 |
Yuan Dongliu1, Yang Guoliang2, Xu Haocheng1, Qing Shuaijia1, Bing Li3, Jia Yanglei1.
Abstract
This study reports an outbreak of acute febrile respiratory illness caused by human adenovirus B [P14H11F14] in a military training center in China between May and June 2014. In total, 164 military personnel were affected, and two patients were admitted into the intensive care unit of the military regional central hospital. A HAdV-B [P14H11F14] virus was confirmed as the etiological pathogen of this acute outbreak of febrile respiratory illness based on clinical manifestations, epidemiological characteristics, specific molecular detection results, phylogenetic analysis, and serological assays. The virus was isolated by the rhabdomyosarcoma cell culture method, and the complete sequences of the E1A, penton base, hexon, and fiber genes were determined and deposited in the GenBank database. Phylogenetic and sequence homology analyses indicated that the isolated strain is most closely related to some HAdV-55 strains from mainland China. However, this strain appeared to be less virulent than former HAdV-55 strains. According to the chest X-ray results of 31 affected patients, there was no radiological evidence of pneumonia. The most frequent symptoms in these patients were sore throat (95.12 %, 156/164) and tonsillitis (93.29 %, 153/164). During the course of the outbreak, incorrect response measures and some potential risk factors, such as fire training and marching training, may have exacerbated the spread of the infection. This outbreak illustrates the urgent need to improve the epidemiological and etiological surveillance of HAdV infections and to improve the ability of doctors and health officials in basic units of the Chinese army to respond effectively to febrile respiratory illness.Entities:
Mesh:
Year: 2016 PMID: 27352268 PMCID: PMC7086590 DOI: 10.1007/s00705-016-2949-x
Source DB: PubMed Journal: Arch Virol ISSN: 0304-8608 Impact factor: 2.574
Primers used to amplify and sequence the entire E1A, penton base, hexon, and fiber genes of HAdV-B [P14H11F14] strain SD77001
| Primer | Sequence (5’ - 3’) | Size (bp) |
|---|---|---|
| E1A_1f | TGCTATGAAGACGGGTTTCC | 748 |
| E1A_1r | CGTCCGAAGCGTTCTCTAAC | |
| E1A_2f | ATGGCAGGGTGGAGTATTTG | 700 |
| E1A_2r | AACACTGGCAGCCTTCACTC | |
| Penton_1f | TCGCTTGGGTGGTATGTTGTA | 751 |
| Penton_1r | CACCAATGTCACTTTCAAGCA | |
| Penton_2f | GTGATGGTGTCCAGAAAACCT | 807 |
| Penton_2r | ATCTGAGGTGGTGAGCAATGT | |
| Penton_3f | GCTAACGCTGGAGAGGTCAG | 790 |
| Penton_3r | CACGGGATGTTGGGTAGAAC | |
| Hexon_1f | TCACAGCAGCAGAGGAAAAA | 701 |
| Hexon_1r | TTTCGGTCTTTCCATCAAGG | |
| Hexon_2f | TCAGTGGATTGCAGAAGGTG | 996 |
| Hexon_2r | CTTCGCCATAGATTGGCTTG | |
| Hexon_3f | ATGCAGTGGTTGACTTGCAG | 907 |
| Hexon_3r | TTGGCAGGAATGGGATAGAG | |
| Hexon_4f | CAAAAACCTGCTGCTTCTCC | 908 |
| Hexon_4r | GCCACATGGTTCTGTCACAC | |
| Hexon_5f | CAGATGCTCGCCAACTACAA | 845 |
| Hexon_5r | TCATCCGAGAATCCAAAAGG | |
| Fiber_1f | TTAACCCCGCTAACAACCAC | 899 |
| Fiber_1r | GAAGGGGGAGGCAAAATAAC | |
| Fiber_2f | GGCCAAAGAGCTCAGAGATG | 804 |
| Fiber_2r | ATCCGGCTCCTAGGGATAAA |
Primers were designed according to human adenovirus 55 strain QS-DLL (GenBank accession: FJ643676)
Fig. 1Case distribution in an outbreak of FRI caused by a type-55-like HAdV-B [P14H11F14] virus in a military training center in Shandong Province, China, from 7 May to 15 June. The triangular markers represent six virus isolates, indicating their onset time distribution and unit distribution
Symptoms and characteristics of 164 patients in the military outbreak of FRI, 2014
| Symptom | No. (%) of patients |
|---|---|
| Fever | 164 (100) |
| Median peak temperature, °C (range) | 38.5 (37.5 – 40.0) |
| Median duration, days (range) | 3 (2 – 9) |
| Sore throat | 156 (95.12%) |
| Tonsillitis | 153 (93.29%) |
| Headache | 63 (38.41%) |
| Fatigue | 60 (36.59%) |
| Cough | 34 (20.73%) |
| Sputum | 15 (9.15%) |
| Nasal discharge | 7 (4.27%) |
| Diarrhea | 3 (1.83%) |
Fig. 2Phylogenetic analysis based on the complete hexon, penton base, fiber, and E1A gene sequences of strain SD77001 and their counterparts in 23 other HAdV strains representing HAdV species A–G. Phylogenetic analysis was conducted by using the neighbor-joining method and 1000 bootstrap pseudoreplicates using the MEGA 5 program. HAdV-B [P14H11F14] isolate SD77001 (this outbreak) is indicated by a black triangle. Reference strains are labeled with their GenBank accession numbers, countries of collection, and dates of collection. (a) Phylogenetic tree based on the complete E1A gene. (b) Phylogenetic tree based on the complete penton base gene. (c) Phylogenetic tree based on the complete hexon gene. (d) Phylogenetic tree based on the complete fiber gene. (e) Phylogenetic tree based on the complete hexon gene of HAdV-B [P14H11F14] strain SD77001 and reference strains of HAdV subspecies B2
HAdV-specific serological assay and statistical analysis
| Phase | Patients | Healthy controls | Chi-square testb | |
|---|---|---|---|---|
| Acute phase | IgA | 27.9 % (12 of 43) | 11.8 % (6 of 51) | P < 0.05 χ2 = 3.93 |
| IgG | 18.6 % (8 of 43) | 13.7 % (7 of 51) | P = 0.52 χ2 = 0.41 | |
| CONVa phase | IgA | 85.0 % (51 of 60) | 52.9 % (27 of 51) | P < 0.01 χ2 = 13.56 |
| IgG | 93.3 % (56 of 60) | 58.8 % (30 of 51) | P < 0.01 χ2 = 18.81 |
aCONV, convalescent phase
bChi-square tests were conducted using SPSS 19